Improvement and optimization of a multiplex real-time reverse transcription polymerase chain reaction assay for the detection and typing of vesicular stomatitis virus

Journal of Veterinary Diagnostic Investigation

Volumn 22, Issue 3, 2010, Pages 428-433

  Hole, Kate ^a   Velazques Salinas, Lauro ^b   Clavijo, Alfonso ^a  

^a CANADIAN FOOD INSPECTION AGENCY   (Canada)

^b Comision Mexico Estados Unidos para la Prevencion de la Fiebre Aftosa y otras Enfermedades Exoticas ^*  (Mexico)

Author keywords

Molecular diagnostics; Rapid detection; Real time reverse transcription polymerase chain reaction; Vesicular diseases; Vesicular stomatitis virus

Indexed keywords

VESICULAR STOMATITIS INDIANA VIRUS; VESICULAR STOMATITIS NEW JERSEY VIRUS; VESICULAR STOMATITIS VIRUS;

EID: 77952580647     PISSN: 10406387     EISSN: None     Source Type: Journal    
DOI: 10.1177/104063871002200315     Document Type: Article

References (20)

1. Baner J, Gyarmati P, Yacoub A, et al.: 2007, Microarray- based molecular detection of foot-and-mouth disease, vesicular stomatitis and swine vesicular disease viruses, using padlock probes. J Virol Methods 143:200-206.
2. Barik S, Rud EW, Luk D, et al.: 1990, Nucleotide sequence analysis of the L gene of vesicular stomatitis virus (New Jersey serotype): identification of conserved domains in L proteins of nonsegmented negative-strand RNA viruses. Virology 175:332-337.
3. Feldhaus AL, Lesnaw JA: 1988, Nucleotide sequence of the L gene of vesicular stomatitis virus (New Jersey): identification of conserved domains in the New Jersey and Indiana L proteins. Virology 163:359-368.
4. Fernandez J, Aguero M, Romero L, et al.: 2008, Rapid and differential diagnosis of foot-and-mouth disease, and vesicular stomatitis by a new multiplex RT-PCR assay. J Virol Methods 47:301-311.
5. Hole K, Clavijo A, Pineda LA: 2006, Detection and serotype- specific differentiation of vesicular stomatitis virus using a multiplex, real-time, reverse transcription-polymerase chain reaction assay. J Vet Diagn Invest 18:139-146.
6. Jack PJM, Amos-Ritchie RN, Reverter A: 2009, et al. Microarray-based detection of viruses causing vesicular or vesicular-like lesions in livestock. Vet Microbiol 133:145-153.
7. Lyles DS, Rupprecht CE: 2007, Rhabdoviridae. In: Fields virology, ed. Knipe DM, Howley PM, Griffin DE, et al., 5th ed., pp. 1363-1408. Lippincott Williams & Wilkins, Philadelphia, PA.
8. Moniwa M, Clavijo A, Li M, et al.: 2007, Performance of a reverse-transcription FMDV PCR with amplification controls between three real-time instruments. J Vet Diagn Invest 19:9-20.
9. Pauszek SJ, Allende R, Rodriguez LL: 2008, Characterization of the full-length genomic sequences of vesicular stomatitis cocal and alagoas viruses. Arch Virol 153:1353-1357.
10. Rainwater-Lovett K, Pauszek SJ, Kelley WN, Rodriguez LL: 2007, Molecular epidemiology of vesicular stomatitis New Jersey virus from the 2004-2005 US outbreak indicates a common origin with Mexican strains. J Gen Virol 88:2042-2051.
11. Rasmussen TB, Uttenthal A, Aguero M: 2006, Detection of three porcine vesicular viruses using multiplex real-time primer-probe energy transfer. J Virol Methods 134:176-182.
12. Rasmussen TB, Uttenthal A, Fernandez J, Storgaard T: 2005, Quantitative multiplex assay for simultaneous detection and identification of Indiana and New Jersey serotypes of vesicular stomatitis virus. J Clin Microbiol 43:356-362.
13. Rodriguez LL: 2002, Emergence and re-emergence of vesicular stomatitis in the United States. Virus Res 85:211-219.
14. Rodriguez LL, Bunch TA, Fraire M, Llewellyn ZN: 2000, Reemergence of vesicular stomatitis in the western United States is associated with distinct viral genetic lineages. Virology 271:171-181.
15. Rodriguez LL, Fitch WM, Nichol ST: 1996, Ecological factors rather than temporal factors dominate the evolution of vesicular stomatitis virus. Proc Natl Acad Sci U S A 93:13030-13035.
16. Rodriguez LL, Pauszek SJ, Bunch TA, Schumann KR: 2002, Full-length genome analysis of natural isolates of vesicular stomatitis virus (Indiana 1 serotype) from North, Central and South America. J Gen Virol 83:2475-2483.
17. Rodriguez-Sanchez B, Sanchez-Vizcaino JM, Uttenthal A, et al.: 2008, Improved diagnosis for nine viral diseases considered as notifiable by the World Organization for Animal Health. Transbound Emerg Dis 55:215-255.
18. Schubert M, Harmison GG, Meier E: 1984, Primary structure of the vesicular stomatitis virus polymerase (L) gene: evidence for a high frequency of mutations. J Virol 51:505-514.
19. Wilson WC, Letchworth GJ, Jimenez C, et al.: 2009, Field evaluation of a multiplex real-time reverse transcription polymerase chain reaction assay for detection of Vesicular stomatitis virus. J Vet Diagn Invest 21:179-186.
20. World Organization for Animal Health (OIE): 2009, Vesicular stomatitis, Chapter 2.1.19. In: Manual of diagnostic tests and vaccines for terrestrial animals, pp. 367-376. OIE, Paris, France.