Biochemical characterization of Gram-positive and Gram-negative plant-associated bacteria with micro-raman spectroscopy

Applied Spectroscopy

Volumn 64, Issue 4, 2010, Pages 433-441

  Paret, Mathews L ^a   Sharma, Shiv K ^b   Green, Lisa M ^a   Alvarez, Anne M ^a  

^a UNIVERSITY OF HAWAII AT MANOA   (United States)

^b UNIVERSITY OF HAWAII   (United States)

Author keywords

Clavibacter michiganensis subsp. Michiganensis; Micro raman spectroscopy; Microbacterium testaceum; PCA; Plant bacteria; Principal component analysis; Ralstonia solanacearum; Xanthomonas axonopodis pv. Dieffenbachiae

Indexed keywords

AMINO ACIDS; BACTERIOLOGY; CHAINS; LASER EXCITATION; ORGANIC COMPOUNDS; PIGMENTS; PRINCIPAL COMPONENT ANALYSIS; RAMAN SCATTERING; RAMAN SPECTROSCOPY; SPECTROMETERS; SPECTRUM ANALYSIS;

CLAVIBACTER MICHIGANENSIS SUBSP. MICHIGANENSIS; MICRO RAMAN SPECTROSCOPY; MICROBACTERIUM; PLANT BACTERIA; RALSTONIA SOLANACEARUM; XANTHOMONAS AXONOPODIS;

BACTERIA;

EID: 77952538471     PISSN: 00037028     EISSN: None     Source Type: Journal    
DOI: 10.1366/000370210791114293     Document Type: Article

References (40)

1. C. Xie and Y. Li, J. Appl. Phys. 93, 2982 (2003).
2. J. D. Gelder, P. Scheldeman, K. Leus, M. Heyndrickx, P. Vandenabeele, L. Moens, and P. D. Vos, Anal. Bioanal. Chem. 389, 2143 (2007).
3. E. C. Lopez-Diez and R. Goodacre, Anal. Chem. 76, 585 (2004).
4. A. Sengupta, M. Mujacic, and E. J. Davis, Anal. Bioanal. Chem. 386, 1379 (2006).
5. M. L. Laucks, A. Sengupta, K. Junge, E. J. Davis, and B. D. Swanson, Appl. Spectrosc. 59, 1222 (2005).
6. M. Culha, A. Adiguzel, M. M. Yazici, M. Kahraman, F. Sahin, and M. Gulluce, Appl. Spectrosc. 62, 1226 (2008).
7. A. A. Kamnev, P. A. Tarantilis, L. P. Antonyuk, L. A. Bespalova, M. G. Pobssiou, M. Colina, P. H. E. Gardiner, and V. V. Ignatov, J. Mol. Struct. 536-564, 199 (2001).
8. Z. Movasaghi, S. Rehman, and I. U. Rehman, Appl. Spectrosc. Rev. 42, 493 (2007).
9. J. D. Gelder, K. D. Gussem, P. Vandenabeele, and L. Moens, J. Raman Spectrosc. 38, 1133 (2007).
10. G. N. Agrios, Plant Pathology (Elsevier Academic Press, Burlington, MA, 2005), 5th ed.
11. G. L. Schuman and C. J. D'Aery, Essential Plant Pathology (American Phytopathological Society Press, St. Paul, MN, 2006).
12. J. G. Holt, N. R. Kreig, P. H. A. Sneath, J. T. Staley, and S. T. Williams, Bergey's Manual of Determinative Bacteriology (Lippincott Williams and Wilkins, Baltimore, MD, 2000), 9th ed.
13. P. V. Zinin, A. Misra, L. Kamemoto, Q. Yu, and S. K. Sharma, J. Opt. Soc. Am. B 24, 2779 (2007).
14. A. K. Misra, S. K. Sharma, L. Kamemoto, P. V. Zinin, Q. Yu, N. Hu, and L. Melnick, Appl. Spectrosc. 63, 373 (2009).
15. C. Sandt T. Smith-Palmer, J. Pink, and D. Pink, Appl. Spectrosc. 62, 975 (2008).
16. J. D. Gelder, K. D. Gussem, P. Vandenabeele, M. Vancanneyt, P. D. Vos, and L. Moens, Anal. Chim. Acta 603, 167 (2007).
17. L. J. Goeller and M. R. Riley, Appl. Spectrosc. 61, 679 (2007).
18. A. M. Alvarez, P. J. Toves, and T. S. Vowell, APSnet Feature (Feb. 2006), http://www.apsnet.org/onUne/feature/anthurium.
19. U. Neugebauer, U. Schmid, K. Baumann, W. Ziebuhr, S. Kozitskaya, V. Decken, M. Schmitt, and J. Popp, Chem Phys Chem 8, 124 (2007).
20. K. C. Schuster, E. Urlaub, and J. R. Gapes, J. Microbiolog. Meth. 42, 29 (2000).
21. C. Mitchell, S. Iyer, J. F. Skomurski, and J. C. Vary, Appl. Environ. Microbiol. 52, 64 (1986).
22. H. Schulz, M. Baranska, and R. Baranski, Biopolymers 77, 212 (2005).
23. H. Schulz and M. Baranska, Vib. Spectrosc. 43, 13 (2007).
24. Q. Wu, T. Hamilton, W. H. Nelson, S. Elliott, J. F. Sperry, and M. Wu, Anal. Chem. 73, 3432 (2001).
25. S. Saperstein and M. P. Starr, Biochem. J. 57, 273 (1954).
26. S. Saperstein, M. P. Starr, and J. A. Filfus, J. Gen. Microbiol. 10, 85 (1954).
27. W. S. Kaneshiro, C. Y. Mizumoto, and A. M. Alvarez, Eur. J. Plant Pathol. 116, 45 (2006).
28. W. S. Kaneshiro, M. Burger, B. G. Vine, A. S. deSilva, and A. M. Alvarez, Plant Disease 92, 1444 (2008).
29. K. A. Nishijima, A. M. Alvarez, P. R. Hepperly, M. H. Shintaku, L. M. Keith, D. M. Sato, B. C. Bushe, J. W. Armstrong, and F. T. Zee, Plant Disease 88, 1318 (2004).
30. J. A. Leigh and D. L. Coplin, Ann. Rev. Microbiol. 46, 307 (1992).
31. I. K. Toth, L. Pritchard, and P. R. J. Birch, Ann. Rev. Phytopathol. 44, 305 (2006).
32. J. Schell and M. Van Montagu, Basic Life Sci. 9, 159 (1977).
33. W. F. Howard, Jr., W. H. Nelson, and J. F. Sperry, Appl. Spectrosc. 34,72 (1980).
34. J. R. Goodwin, L. M. Hafner, and P. M. Fredericks, J. Raman Spectrosc. 37, 932 (2006).
35. M. P. Starr, C. L. Jenkins, L. B. Bussey, and A. G. Andrewes, Arch. Microbiol. 113, 1 (1977).
36. W. W. C. Chun, The Plant Health Instructor (2002) DOI: 10.1094/PHI-A2000-0824-01, http://www.apsnet.org/education/advancedplantpath/ topics/xanthomonadins/default.htm.
37. W. Chun, J. Cui, and A. Poplawsky, Physiol. Mol. Plant Pathol. 51, 1 (1997).
38. R. J. H. Clark, N. R. D'Urso, and P. F. Zagalsky, J. Am. Chem. Soc. 102, 6693 (1980).
39. K. V. Mardia, J. T. Kent, and J. M. Bibby, Multivariate Analysis (Academic Press, San Diego, CA, 1979).
40. P. C. Mahalanobis, Proc. Nad. Inst Sci. India 2, 49 (1936).