β-D-Galactosidase from Paenibacillus thiaminolyticus catalyzing transfucosylation reactions

Glycobiology

Volumn 20, Issue 4, 2009, Pages 442-451

  Benešová, Eva ^a   Lipovová, Petra ^a   Dvořáková, Hana ^a   Králová, Blanka ^a  

^a INSTITUTE OF CHEMICAL TECHNOLOGY   (Czech Republic)

Author keywords

D fucosidase; D galactosidase; Paenibacillus thiaminolyticus; Transglycosylation

Indexed keywords

1 OCTYL BETA DEXTO FUCOPYRANOSIDE; 1 PROPYL BETA DEXTRO FUCOPYRANOSIDE; 2 OCTYL BETA DEXTRO FUCOPYRANOSIDE; 4 NITROPHENYL BETA DEXTRO FUCOPYRANOSIDE; 4 NITROPHENYL BETA DEXTRO FUCOPYRANOSYL (1,3) BETA DEXTRO FUCOPYRANOSIDE; 4 NITROPHENYL BETA DEXTRO FUCOPYRANOSYL (1,3) BETA DEXTRO GLUCOPYRANOSIDE; 4 NITROPHENYL BETA DEXTRO FUCOPYRANOSYL (1,3) BETA DEXTRO MANNOPYRANOSIDE; 4 NITROPHENYL BETA DEXTRO FUCOPYRANOSYL (1,6) BETA DEXTRO GALACTOPYRANOSIDE; 4 NITROPHENYL BETA DEXTRO GLUCOPYRANOSIDE; 4 NITROPHENYLGALACTOSIDE; 4 NITROPHENYLGLYCOPYRANOSIDE; AGAROSE; ALCOHOL; BETA DEXTRO FUCOSIDASE; BETA GALACTOSIDASE; ETHYL BETA DEXTRO FUCOPYRANOSIDE; GLYCOSIDASE; HYBRID PROTEIN; LACTOSE; METHYL BETA DEXTRO FUCOPYRANOSIDE; MONOMER; RECOMBINANT BETA GALACTOSIDASE; RECOMBINANT ENZYME; RECOMBINANT FUSION PROTEIN; UNCLASSIFIED DRUG;

AFFINITY CHROMATOGRAPHY; AMINO ACID SEQUENCE; ARTICLE; BIOCATALYSIS; BIOSYNTHESIS; ENZYME PURIFICATION; ENZYME SUBSTRATE; ENZYME SYNTHESIS; FUCOSYLATION; GEL FILTRATION CHROMATOGRAPHY; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; PAENIBACILLUS; PAENIBACILLUS THIAMINOLYTICUS; PH; PRIORITY JOURNAL; PROTEIN EXPRESSION; TEMPERATURE; TRANSFUCOSYLATION;

ALPHA-L-FUCOSIDASE; AMINO ACID SEQUENCE; BASE SEQUENCE; BETA-GALACTOSIDASE; CATALYSIS; CHROMATOGRAPHY, AFFINITY; CHROMATOGRAPHY, GEL; ESCHERICHIA COLI; MOLECULAR WEIGHT; PAENIBACILLUS; RECOMBINANT PROTEINS; TEMPERATURE;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; PAENIBACILLUS THIAMINOLYTICUS;

EID: 77952311394     PISSN: 09596658     EISSN: 14602423     Source Type: Journal    
DOI: 10.1093/glycob/cwp196     Document Type: Article

References (32)

1. Bradford MM. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 72:248-254.
2. Brückner J. 1955. Estimation of monosaccharides by the orcinol-sulphuric acid reaction. Biochem J. 60:200-205.
3. Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, Henrissat B. 2009. The Carbohydrate-Active EnZymes database (CAZy): An expert resource for Glycogenomics. Nucleic Acids Res. 37:D233-D238.
4. Chang A, Scheer M, Grote A, Schomburg I, Schomburg D. 2009. BRENDA, AMENDA and FRENDA the enzyme information system: New content and tools in 2009. Nucleic Acids Res. 37:D588-D592.
5. Crout DHG, Vic G. 1998. Glycosidases and glycosyl transferases in glycoside and oligosaccharide synthesis. Curr Opin Chem Biol. 2:98-111.
6. Dwek AR. 1996. Glycobiology: Toward understanding the function of sugars. Chem Rev. 96:683-720.
7. Fourage L, Colas B. 2001. Synthesis of β-D-glucosyl-and β-D-fucosyl-glucoses using β-glycosidase from Thermus thermophilus. Appl Microbiol Biotechnol. 56:406-410.
8. Fujimoto H, Miyasato M, Ito Y, Sasaki T, Ajisaka K. 1998. Purification and properties of recombinant β-galactosidase from Bacillus circulans. Glycoconjugate J. 15:155-160.
9. Henrissat B. 1991. A classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J. 280:309-316.
10. Henrissat B, Davies G. 1997. Structural and sequence-based classification of glycoside hydrolases. Curr Opin Struct Biol. 7:637-644.
11. Karasová-Lipovová P, Strnad H, Spiwok V, Malá Š, Králová B, Russell NJ. 2003. The cloning, purification and characterisation of a cold-active β-galactosidase from the psychrotolerant Antarctic bacterium Arthrobacter sp. C2-2. Enzyme Microb Technol. 33:836-844.
12. Kobayashi T, Adachi S, Matsuno R. 1999. Synthesis of alkyl fucosides through β-glucosidase-catalyzed condensation of fucose and 1-alcohols. Biotechnol Lett. 21:105-109.
13. Křen V, Thiem J. 1997. Glycosylation employing bio-systems: From enzymes to whole cells. Chem Soc Rev. 26:463-474.
14. Laemli UK. 1971. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 227:680-685.
15. Li J, Robertson DE, Short JM, Wang PG. 1998. Chemical and enzymatic synthesis of glycoconjugates 4. Control of regioselectivity in high yielding synthesis of (β-D-fucopyranosyl)-O-D-xylopyranosyl disaccharides using a CLONENZYME™ thermophilic glycosidase. Tetrahedron Lett. 39:8963-8966.
16. Li Y, Wang H, Lu L, Zhengyi L, Xu X, Xiao M. 2009. Purification and characterization of a novel β-galactosidase with transglycosylation activity from Bacillus megaterium 2-37-4-1. Appl Biochem Biotechnol. 158:192-199.
17. Li L, Zhang M, Jiang Z, Tang L, Cong Q. 2009. Characterisation of a thermostable family 42 β-galactosidase from Thermotoga maritima. Food Chem. 112:844-850.
18. Lirdprapamongkol K, Svasti J. 2000. Alkyl glucoside synthesis using Thai rosewood β-glucosidase. Biotechnol Lett. 22:1889-1894.
19. Miyasato M, Ajisaka K. 2004. Regioselectivity in β-galactosidase-catalyzed transglycosylation for the enzymatic assembly of D-galactosyl-D-mannose. Biosci Biotechnol Biochem. 68(10):2086-2090.
20. Nunoura N, Ohdan K, Yano T, Yamamoto K, Kumagai H. 1996. Purification and characterization of β-D-glucosidase (β-D-fucosidase) from Bifidobacterium breve clb acclimated to cellobiose. Biosci Biotech Biochem. 60(2):188-193.
21. Okahata Y, Mori T. 1998. Transglycosylation catalyzed by a lipid-coated β-D-galactosidase in two-phase aqueous-organic system. J Mol Catal B: Enzym. 5:119-123.
22. Onishi N, Tanaka T. 1995. Purification and properties of a novel thermostable galacto-oligosaccharide-producing β-galactosidase from Sterigmatomyces elviae CBS8119. Appl Environ Microbiol. 61(11):4026-4030.
23. Palcic MM. 1999. Biocatalytic synthesis of oligosaccharides. Curr Opin Biotechnol. 10:616-624.
24. Panesar PS, Panesar R, Singh RS, Kennedy JF, Kumar H. 2006. Microbial production, immobilization and applications of β-galactosidase. J Chem Technol Biotechnol. 81:530-543.
25. Parikh MR, Matsumura I. 2005. Site-saturation mutagenesis is more efficient than DNA shuffling for the directed evolution of β-fucosidase from β-galactosidase. J Mol Biol. 352:621-628.
26. Sakai K, Tachiki T, Kumagai H. 1989. Synthesis of β-D-fucosylglucose by β-D-glucosidase I of Bifidobacterium breve clb and assimilation by Bifidobacteria. Agric Biol Chem. 53(2):313-318.
27. Sambrook J, Russel DW. 2001. Molecular Cloning: A Laboratory Manual. 3rd ed. New York: Cold Spring Harbor Laboratory Press.
28. Sheridan PP, Brenchley JE. 2000. Characterization of a salt-tolerant family 42 β-galactosidase from psychrophilic Antarctic Planococcus isolate. Appl Environ Microbiol. 66(6):2438-2444.
29. Varki A. 1993. Biological roles of oligosaccharides: All of the theories are correct. Glycobiology. 3(2):97-130.
30. Watt GM, Lowden PAS, Flitsch SL. 1997. Enzyme-catalyzed formation of glycosidic linkages. Curr Opin Struct Biol. 7:652-660.
31. Zeng X, Yoshino R, Murata T, Ajisaka K, Usui T. 2000. Regioselective synthesis of p-nitrophenyl glycosides of β-D-galactopyranosyl-disaccharides by transglycosylation with β-D-galactosidases. Carbohydr Res. 325:120-131.
32. Zhang J-H, Dawes G, Stemmer WPC. 1997. Directed evolution of a fucosidase from a galactosidase by DNA shuffling and screening. Proc Natl Acad Sci. 94:4504-4509.