-
1
-
-
3543105225
-
Circular binary segmentation for the analysis of array-based DNA copy number data
-
10.1093/biostatistics/kxh008, 15475419
-
Olshen AB, Venkatraman ES, Lucito R, Wigler M. Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 2004, 5:557-572. 10.1093/biostatistics/kxh008, 15475419.
-
(2004)
Biostatistics
, vol.5
, pp. 557-572
-
-
Olshen, A.B.1
Venkatraman, E.S.2
Lucito, R.3
Wigler, M.4
-
2
-
-
34347342852
-
Flexible and accurate detection of genomic copy-number changes from aCGH
-
10.1371/journal.pcbi.0030122, 1894821,1894821, 17590078
-
Rueda OM, Diaz-Uriarte R. Flexible and accurate detection of genomic copy-number changes from aCGH. PLoS Computational Biology 2007, 3(6):e122. 10.1371/journal.pcbi.0030122, 1894821,1894821, 17590078.
-
(2007)
PLoS Computational Biology
, vol.3
, Issue.6
-
-
Rueda, O.M.1
Diaz-Uriarte, R.2
-
3
-
-
52949087226
-
A fast Bayesian change point analysis for the segmentation of microarray data
-
10.1093/bioinformatics/btn404, 18667443
-
Erdman C, Emerson JW. A fast Bayesian change point analysis for the segmentation of microarray data. Bioinformatics 2008, 24:2143-2148. 10.1093/bioinformatics/btn404, 18667443.
-
(2008)
Bioinformatics
, vol.24
, pp. 2143-2148
-
-
Erdman, C.1
Emerson, J.W.2
-
4
-
-
38849183559
-
Sparse representation and Bayesian detection of genome copy number alterations from microarray data
-
10.1093/bioinformatics/btm601, 2704547, 18203770
-
Pique-Regi R, et al. Sparse representation and Bayesian detection of genome copy number alterations from microarray data. Bioinformatics 2008, 24:309-3182. 10.1093/bioinformatics/btm601, 2704547, 18203770.
-
(2008)
Bioinformatics
, vol.24
, pp. 309-3182
-
-
Pique-Regi, R.1
-
5
-
-
65549107341
-
Joint estimation of copy number variation and reference intensities on multiple DNA arrays using GADA
-
10.1093/bioinformatics/btp119, 19276152
-
Pique-Regi R, et al. Joint estimation of copy number variation and reference intensities on multiple DNA arrays using GADA. Bioinformatics 2009, 25(10):1223-1230. 10.1093/bioinformatics/btp119, 19276152.
-
(2009)
Bioinformatics
, vol.25
, Issue.10
, pp. 1223-1230
-
-
Pique-Regi, R.1
-
6
-
-
35948984173
-
PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data
-
10.1101/gr.6861907, 2045149, 17921354
-
Wang K, et al. PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data. Genome Research 2007, 17:1665-167. 10.1101/gr.6861907, 2045149, 17921354.
-
(2007)
Genome Research
, vol.17
, pp. 1665-2167
-
-
Wang, K.1
-
7
-
-
34247877877
-
QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data
-
10.1093/nar/gkm076, 1874617, 17341461
-
Colella S, et al. QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data. Nucleic Acids Research 2007, 35:2013-2025. 10.1093/nar/gkm076, 1874617, 17341461.
-
(2007)
Nucleic Acids Research
, vol.35
, pp. 2013-2025
-
-
Colella, S.1
-
9
-
-
33748276243
-
STAC: A method for testing the significance of DNA copy number aberrations across multiple array-CGH experiments
-
10.1101/gr.5076506, 1557772, 16899652
-
Diskin SJ, et al. STAC: A method for testing the significance of DNA copy number aberrations across multiple array-CGH experiments. Genome Research 2006, 16:1149-1158. 10.1101/gr.5076506, 1557772, 16899652.
-
(2006)
Genome Research
, vol.16
, pp. 1149-1158
-
-
Diskin, S.J.1
-
10
-
-
43049143055
-
Mapping and sequencing of structural variation from eight human genomes
-
10.1038/nature06862, 2424287, 18451855
-
Kidd JM, et al. Mapping and sequencing of structural variation from eight human genomes. Nature 2008, 453:56-64. 10.1038/nature06862, 2424287, 18451855.
-
(2008)
Nature
, vol.453
, pp. 56-64
-
-
Kidd, J.M.1
-
11
-
-
38049100456
-
Assessing the significance of chromosomal aberrations in cancer: Methodology and application to glioma
-
10.1073/pnas.0710052104, 2148413, 18077431
-
Beroukhim R, et al. Assessing the significance of chromosomal aberrations in cancer: Methodology and application to glioma. PNAS 2007, 104(50):20007-20012. 10.1073/pnas.0710052104, 2148413, 18077431.
-
(2007)
PNAS
, vol.104
, Issue.50
, pp. 20007-20012
-
-
Beroukhim, R.1
-
12
-
-
45849154162
-
Weighted clustering of called array CGH data
-
10.1093/biostatistics/kxm048, 18156651
-
Van Wieringen WN, Wiel MA, Ylstra B. Weighted clustering of called array CGH data. Biostatistics 2008, 9(3):484-500. 10.1093/biostatistics/kxm048, 18156651.
-
(2008)
Biostatistics
, vol.9
, Issue.3
, pp. 484-500
-
-
Van Wieringen, W.N.1
Wiel, M.A.2
Ylstra, B.3
-
14
-
-
33847357298
-
Cross-platform array comparative genomic hybridization meta-analysis separates hematopoietic and mesenchymal from epithelial tumors
-
10.1038/sj.onc.1209919, 16936777
-
Jong K, et al. Cross-platform array comparative genomic hybridization meta-analysis separates hematopoietic and mesenchymal from epithelial tumors. Oncogene 2007, 26:1499-1506. 10.1038/sj.onc.1209919, 16936777.
-
(2007)
Oncogene
, vol.26
, pp. 1499-1506
-
-
Jong, K.1
-
16
-
-
52949141845
-
Integrated detection and population-genetic analysis of SNPs and copy number variation
-
10.1038/ng.238, 18776908
-
McCarroll SA, et al. Integrated detection and population-genetic analysis of SNPs and copy number variation. Nature Genetics 2008, 40:1166-1174. 10.1038/ng.238, 18776908.
-
(2008)
Nature Genetics
, vol.40
, pp. 1166-1174
-
-
McCarroll, S.A.1
-
17
-
-
77950460950
-
Origins and functional impact of copy number variation in the human genome
-
Conrad DF, et al. Origins and functional impact of copy number variation in the human genome. Nature 2009,
-
(2009)
Nature
-
-
Conrad, D.F.1
-
18
-
-
12344259648
-
Analysis of array CGH data: from signal ratio to gain and loss of DNA regions
-
10.1093/bioinformatics/bth418, 15381628
-
Hupe P, et al. Analysis of array CGH data: from signal ratio to gain and loss of DNA regions. Bioinformatics 2004, 20(18):3413-3422. 10.1093/bioinformatics/bth418, 15381628.
-
(2004)
Bioinformatics
, vol.20
, Issue.18
, pp. 3413-3422
-
-
Hupe, P.1
-
19
-
-
34548452229
-
Assessing the significance of conserved genomic abberations using high resolution genomic microarrays
-
10.1371/journal.pgen.0030143, 1950957,1950957, 17722985
-
Guttman M, et al. Assessing the significance of conserved genomic abberations using high resolution genomic microarrays. PLoS Genetics 2007, 3(8):e143. 10.1371/journal.pgen.0030143, 1950957,1950957, 17722985.
-
(2007)
PLoS Genetics
, vol.3
, Issue.8
-
-
Guttman, M.1
-
20
-
-
33746513094
-
Linkage disequilibrium and heritability of copy-number polymorphisms within duplicated regions of the human genome
-
10.1086/505653, 1559496, 16826518
-
Locke DP, et al. Linkage disequilibrium and heritability of copy-number polymorphisms within duplicated regions of the human genome. American Journal of Human Genetics 2006, 79:275-290. 10.1086/505653, 1559496, 16826518.
-
(2006)
American Journal of Human Genetics
, vol.79
, pp. 275-290
-
-
Locke, D.P.1
-
21
-
-
33751329250
-
Global variation in copy number in the human genome
-
10.1038/nature05329, 2669898, 17122850
-
Redon R, et al. Global variation in copy number in the human genome. Nature 2006, 444:444-454. 10.1038/nature05329, 2669898, 17122850.
-
(2006)
Nature
, vol.444
, pp. 444-454
-
-
Redon, R.1
-
22
-
-
0033817459
-
Heterozygous germline mutations in BMPR2, encoding a TGF-beta receptor, cause familial primary pulmonary hypertension
-
10.1038/79226, 10973254
-
Lane KB, Consortium TIP, et al. Heterozygous germline mutations in BMPR2, encoding a TGF-beta receptor, cause familial primary pulmonary hypertension. Nature Genetics 2000, 26:81-84. 10.1038/79226, 10973254.
-
(2000)
Nature Genetics
, vol.26
, pp. 81-84
-
-
Lane, K.B.1
Consortium, T.I.P.2
-
23
-
-
0030761094
-
The presenilins and Alzheimer's disease
-
10.1093/hmg/6.10.1639, 9300655
-
Hutton M, Hardy J. The presenilins and Alzheimer's disease. Human Molecular Genetics 1997, 6:1639-1646. 10.1093/hmg/6.10.1639, 9300655.
-
(1997)
Human Molecular Genetics
, vol.6
, pp. 1639-1646
-
-
Hutton, M.1
Hardy, J.2
|