-
2
-
-
35048857464
-
LIMBO: Scalable clustering of categorical data
-
Heraklion, Crete, Greece, March 14-18, Berlin: Springer, pp
-
ANDRITSOS, P., TSAPARAS, P., MILLER, R. J. AND SEVCIK, K. C. (2004). LIMBO: scalable clustering of categorical data. Advances in Database Technology-EDBT 2004: Ninth International Conference on Extending Database Technology, Heraklion, Crete, Greece, March 14-18, 2004, Berlin: Springer, pp. 123-146.
-
(2004)
Advances in Database Technology-EDBT 2004: Ninth International Conference on Extending Database Technology
, pp. 123-146
-
-
ANDRITSOS, P.1
TSAPARAS, P.2
MILLER, R.J.3
SEVCIK, K.C.4
-
3
-
-
0038494682
-
COOLCAT: An entropy-based algorithm for categorical clustering
-
New York: ACM, pp
-
BARBARÁ, D., COUTO, J. AND LI, Y. (2002). COOLCAT: an entropy-based algorithm for categorical clustering. Proceedings of the 11th International Conference on Information and Knowledge Management, New York: ACM, pp. 582-589.
-
(2002)
Proceedings of the 11th International Conference on Information and Knowledge Management
, pp. 582-589
-
-
BARBARÁ, D.1
COUTO, J.2
LI, Y.3
-
4
-
-
45849093006
-
-
DE MAST, J. AND VAN WIERINGEN, W. N. (2006). The Iota coefficient as an index of repeatability and reproducibility of ordinal measurements. Technical Report. University of Amsterdam.
-
DE MAST, J. AND VAN WIERINGEN, W. N. (2006). The Iota coefficient as an index of repeatability and reproducibility of ordinal measurements. Technical Report. University of Amsterdam.
-
-
-
-
5
-
-
34547358071
-
-
DE MAST, J. AND VAN WIERINGEN, W. N. (2007). Measurement system analysis for categorical measurements: agreement and kappa type indices. Journal of Quality Technology 39, 191-202.
-
DE MAST, J. AND VAN WIERINGEN, W. N. (2007). Measurement system analysis for categorical measurements: agreement and kappa type indices. Journal of Quality Technology 39, 191-202.
-
-
-
-
6
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
EISEN, M. B., SPELLMAN, P. T., BROWN, P. O. AND BOTSTEIN, D. (1998). Cluster analysis and display of genome-wide expression patterns. Proceedings of the National Academy of Sciences of the United States of America 95, 14863-14868.
-
(1998)
Proceedings of the National Academy of Sciences of the United States of America
, vol.95
, pp. 14863-14868
-
-
EISEN, M.B.1
SPELLMAN, P.T.2
BROWN, P.O.3
BOTSTEIN, D.4
-
7
-
-
33745433256
-
A pseudolikelihood approach for simultaneous analysis of array comparative genomic hybridizations
-
ENGLER, D. A., MOHAPATRA, G., LOUIS, D. N. AND BETENSKY, R. A. (2006). A pseudolikelihood approach for simultaneous analysis of array comparative genomic hybridizations. Biostatistics 7, 399-421.
-
(2006)
Biostatistics
, vol.7
, pp. 399-421
-
-
ENGLER, D.A.1
MOHAPATRA, G.2
LOUIS, D.N.3
BETENSKY, R.A.4
-
8
-
-
33646559516
-
Breast tumor copy number aberration phenotypes and genomic instability
-
doi: 10.1186/1471-2407-6-96
-
FRIDLYAND, J., SNIJDERS, A. M., YLSTRA, B., LI, H., OLSHEN, A., SEGRAVES, R., DAIRKEE, S., TOKUYASU, T., LJUNG, B. M., JAIN, A. N. and others (2006). Breast tumor copy number aberration phenotypes and genomic instability. BMC Cancer 6: 96, doi: 10.1186/1471-2407-6-96.
-
(2006)
BMC Cancer
, vol.6
, pp. 96
-
-
FRIDLYAND, J.1
SNIJDERS, A.M.2
YLSTRA, B.3
LI, H.4
OLSHEN, A.5
SEGRAVES, R.6
DAIRKEE, S.7
TOKUYASU, T.8
LJUNG, B.M.9
JAIN, A.N.10
and others11
-
9
-
-
45849149344
-
-
GANTI, V., GEHRKE, J. AND R AMAKRISHNAN, R. (1999). CACTUS: clustering categorical data using summaries. Proceedings of the Fifth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, New York: ACM, pp. 73-83.
-
GANTI, V., GEHRKE, J. AND R AMAKRISHNAN, R. (1999). CACTUS: clustering categorical data using summaries. Proceedings of the Fifth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, New York: ACM, pp. 73-83.
-
-
-
-
10
-
-
0002318328
-
Clustering categorical data: An approach based on dynamical systems
-
New York: Springer, pp
-
GIBSON, D., KLEINBERG, J. AND RAGHAVAN, P. (1998). Clustering categorical data: an approach based on dynamical systems. Proceedings of the 24th International Conference on Very Large Databases, New York: Springer, pp. 311-323.
-
(1998)
Proceedings of the 24th International Conference on Very Large Databases
, pp. 311-323
-
-
GIBSON, D.1
KLEINBERG, J.2
RAGHAVAN, P.3
-
11
-
-
0034228041
-
ROCK: A robust clustering algorithm for categorical attributes
-
GUHA, S., RASTOGI R. AND SHIM, K. (2000). ROCK: a robust clustering algorithm for categorical attributes. Information Systems 25, 143-158.
-
(2000)
Information Systems
, vol.25
, pp. 143-158
-
-
GUHA, S.1
RASTOGI, R.2
SHIM, K.3
-
12
-
-
0035676057
-
On clustering validation techniques
-
HALKIDI, M., BATISTAKIS, Y. AND VAZIRGIANNIS, M. (2001). On clustering validation techniques. Journal of Intelligent Information Systems 17, 107-145.
-
(2001)
Journal of Intelligent Information Systems
, vol.17
, pp. 107-145
-
-
HALKIDI, M.1
BATISTAKIS, Y.2
VAZIRGIANNIS, M.3
-
13
-
-
25144456056
-
Computational cluster validation in post-genomic data analysis
-
HANDL, J., KNOWLES, J. AND KELL, D. B. (2005). Computational cluster validation in post-genomic data analysis. Bioinformatics 21, 3201-3212.
-
(2005)
Bioinformatics
, vol.21
, pp. 3201-3212
-
-
HANDL, J.1
KNOWLES, J.2
KELL, D.B.3
-
14
-
-
27144536001
-
Extensions to the k-means algorithm for clustering large data sets with categorical values
-
HUANG, Z. (1998). Extensions to the k-means algorithm for clustering large data sets with categorical values. Data Mining and Knowledge Discovery 2, 283-304.
-
(1998)
Data Mining and Knowledge Discovery
, vol.2
, pp. 283-304
-
-
HUANG, Z.1
-
15
-
-
84893405732
-
Data clustering: A review
-
JAIN, A. K., MURTY, M. N. AND FLYNN, P. J. (1999). Data clustering: a review. ACM Computing Surveys 31, 264-323.
-
(1999)
ACM Computing Surveys
, vol.31
, pp. 264-323
-
-
JAIN, A.K.1
MURTY, M.N.2
FLYNN, P.J.3
-
16
-
-
33847357298
-
Cross-platform array comparative genomic hybridization meta-analysis separates hematopoietic and mesenchymal from epithelial tumors
-
JONG, K., MARCHIORI, E.,VAN DER VAART, A. W., CHIN, S. F., CARVALHO, B., TIJSSEN, M., EIJK, P. P., VAN DEN IJSSEL, P., GRABSCH, H., QUIRKE, P. and others (2007). Cross-platform array comparative genomic hybridization meta-analysis separates hematopoietic and mesenchymal from epithelial tumors. Oncogene 26, 1499-1506.
-
(2007)
Oncogene
, vol.26
, pp. 1499-1506
-
-
JONG, K.1
MARCHIORI, E.2
VAN DER VAART, A.W.3
CHIN, S.F.4
CARVALHO, B.5
TIJSSEN, M.6
EIJK, P.P.7
VAN DEN IJSSEL, P.8
GRABSCH, H.9
QUIRKE, P.10
and others11
-
19
-
-
28344444255
-
A stepwise framework for the normalization of array CGH data
-
doi:10.1186/1471-2105-6-274
-
KHOJASTEH, M., LAM, W. L., WARD, R. K. AND MAC AULAY, C. (2005). A stepwise framework for the normalization of array CGH data. BMC Bioinformatics 6, doi:10.1186/1471-2105-6-274.
-
(2005)
BMC Bioinformatics
, vol.6
-
-
KHOJASTEH, M.1
LAM, W.L.2
WARD, R.K.3
MAC AULAY, C.4
-
20
-
-
0032542364
-
Genetic instabilities in human cancers
-
LENGAUER, C., KINZLER, K. AND VOGELSTEIN, B. (1998). Genetic instabilities in human cancers. Nature 396, 623-627.
-
(1998)
Nature
, vol.396
, pp. 623-627
-
-
LENGAUER, C.1
KINZLER, K.2
VOGELSTEIN, B.3
-
21
-
-
33747857417
-
Distance-based clustering of CGH data
-
LIU, J., MOHAMMED, J., CARTER, J., RANKA, S., KAHVECI, T. AND BAUDIS, M. (2006). Distance-based clustering of CGH data. Bioinformatics 22, 1971-1978.
-
(2006)
Bioinformatics
, vol.22
, pp. 1971-1978
-
-
LIU, J.1
MOHAMMED, J.2
CARTER, J.3
RANKA, S.4
KAHVECI, T.5
BAUDIS, M.6
-
22
-
-
0034826101
-
An experimental comparison of model-based clustering methods
-
MEILA, M. AND HECKERMAN, D. (2001). An experimental comparison of model-based clustering methods. Machine Learning 42, 9-29.
-
(2001)
Machine Learning
, vol.42
, pp. 9-29
-
-
MEILA, M.1
HECKERMAN, D.2
-
23
-
-
33847105471
-
Spatial normalization of array-CGH data
-
doi: 10.1186/1471-2105-7-264
-
NEUVIAL, P., HUPE, P., BRITO, I., LIVA, S., MANIE, E., BRENNETOT, C., RADVANYI, F., AURIAS, A. AND BARILLOT, E. (2006). Spatial normalization of array-CGH data. BMC Bioinformatics 7: 264, doi: 10.1186/1471-2105-7-264.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 264
-
-
NEUVIAL, P.1
HUPE, P.2
BRITO, I.3
LIVA, S.4
MANIE, E.5
BRENNETOT, C.6
RADVANYI, F.7
AURIAS, A.8
BARILLOT, E.9
-
24
-
-
3543105225
-
Circular binary segmentation for the analysis of array-based DNA copy number data
-
OLSHEN, A. B., VENKATRAMAN, E. S., LUCITO, R. AND WIGLER, M. (2004). Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 5, 557-572.
-
(2004)
Biostatistics
, vol.5
, pp. 557-572
-
-
OLSHEN, A.B.1
VENKATRAMAN, E.S.2
LUCITO, R.3
WIGLER, M.4
-
25
-
-
25444531432
-
A statistical approach for array CGH data analysis
-
doi: 10.1186/1471-2105-6-27
-
PICARD, F., ROBIN, S., LAVIELLE, M., VAISSE, C. AND DAUDIN, J. J. (2005). A statistical approach for array CGH data analysis. BMC Bioinformatics 6, 27, doi: 10.1186/1471-2105-6-27.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 27
-
-
PICARD, F.1
ROBIN, S.2
LAVIELLE, M.3
VAISSE, C.4
DAUDIN, J.J.5
-
26
-
-
20044375763
-
Array comparative genomic hybridization and its application in cancer
-
PINKEL, D. AND ALBERTSON, D. (2005). Array comparative genomic hybridization and its application in cancer. Nature Genetics 37, S11-S17.
-
(2005)
Nature Genetics
, vol.37
-
-
PINKEL, D.1
ALBERTSON, D.2
-
27
-
-
17344371740
-
High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays
-
PINKEL, D., SEGRAVES, R., SUDAR, D., CLARK, S., POOLE, I., KOWBEL, D., COLLINS, C., KUO, W.-L., CHEN, C., ZHAI, Y. and others (1998). High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nature Genetics 20, 207-211.
-
(1998)
Nature Genetics
, vol.20
, pp. 207-211
-
-
PINKEL, D.1
SEGRAVES, R.2
SUDAR, D.3
CLARK, S.4
POOLE, I.5
KOWBEL, D.6
COLLINS, C.7
KUO, W.-L.8
CHEN, C.9
ZHAI, Y.10
and others11
-
28
-
-
13844250828
-
-
POLLACK, J. R., SORLIE, T., PEROU, C. M., REES, C. A., JEFFERY, S. S., LONNING, P. E., TIBSHIRANI, R., BOTSTEIN, D., BORRESEN-DALE, A.-L. AND BROWN, P. O. (2002). Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors. Proceedings of the National Academy of Sciences of the United States of America 99, 12963-12968.
-
POLLACK, J. R., SORLIE, T., PEROU, C. M., REES, C. A., JEFFERY, S. S., LONNING, P. E., TIBSHIRANI, R., BOTSTEIN, D., BORRESEN-DALE, A.-L. AND BROWN, P. O. (2002). Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors. Proceedings of the National Academy of Sciences of the United States of America 99, 12963-12968.
-
-
-
-
29
-
-
28444445926
-
-
R DEVELOPMENT CORE TEAM , Vienna, Austria: R Foundation for Statistical Computing
-
R DEVELOPMENT CORE TEAM (2005). R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing. http://www.R-project.org.
-
(2005)
R: A Language and Environment for Statistical Computing
-
-
-
30
-
-
33748862199
-
Advances in cluster analysis in microarray data
-
Azuaje, F. and Dopazo, J, editors, Chichester: Wiley, pp
-
SHENG, Q., MOREAU, Y., DE SMET, F., MARCHAL, K. AND DE MOOR, B. (2005). Advances in cluster analysis in microarray data. In: Azuaje, F. and Dopazo, J. (editors), Data Analysis and Visualization in Genomics and Proteomics. Chichester: Wiley, pp. 153-173.
-
(2005)
Data Analysis and Visualization in Genomics and Proteomics
, pp. 153-173
-
-
SHENG, Q.1
MOREAU, Y.2
DE SMET, F.3
MARCHAL, K.4
DE MOOR, B.5
-
31
-
-
0030701970
-
Matrix-based comparative genomic hybridization: Biochips to screen for genomic imbalances
-
SOLINAS-TOLDO, S., LAMPEL, S., STILGENBAUER, S., NICKOLENKO, J., BENNER, A., DÖHNER, H., CREMER, T. AND LICHTER, P. (1997). Matrix-based comparative genomic hybridization: biochips to screen for genomic imbalances. Genes, Chromosomes and Cancer 20, 399-407.
-
(1997)
Genes, Chromosomes and Cancer
, vol.20
, pp. 399-407
-
-
SOLINAS-TOLDO, S.1
LAMPEL, S.2
STILGENBAUER, S.3
NICKOLENKO, J.4
BENNER, A.5
DÖHNER, H.6
CREMER, T.7
LICHTER, P.8
-
33
-
-
34248523183
-
CGHcall: Calling aberrations for array CGH tumor profiles
-
VAN DE WIEL, M. A., KIM, K. I., VOSSE, S. J.,VAN WIERINGEN, W. N., WILTING, S. M. AND YLSTRA, B. (2007). CGHcall: calling aberrations for array CGH tumor profiles. Bioinformatics 23, 892-894.
-
(2007)
Bioinformatics
, vol.23
, pp. 892-894
-
-
VAN DE WIEL, M.A.1
KIM, K.I.2
VOSSE, S.J.3
VAN WIERINGEN, W.N.4
WILTING, S.M.5
YLSTRA, B.6
-
34
-
-
34250615012
-
-
VAN DE WIEL, M. A. AND VAN WIERINGEN, W. N. (2007). CGHregions: dimension reduction for array CGH data with minimal information loss. Cancer Informatics 2, 55-63.
-
VAN DE WIEL, M. A. AND VAN WIERINGEN, W. N. (2007). CGHregions: dimension reduction for array CGH data with minimal information loss. Cancer Informatics 2, 55-63.
-
-
-
-
35
-
-
33747860911
-
ACE-it: A tool for genome-wide integration of gene dosage and RNA expression data
-
VAN WIERINGEN, W. N., BELIEN, J. A. M., VOSSE, S. J., ACHAME, E. M. AND YLSTRA, B. (2006). ACE-it: a tool for genome-wide integration of gene dosage and RNA expression data. Bioinformatics 22, 1919-1920.
-
(2006)
Bioinformatics
, vol.22
, pp. 1919-1920
-
-
VAN WIERINGEN, W.N.1
BELIEN, J.A.M.2
VOSSE, S.J.3
ACHAME, E.M.4
YLSTRA, B.5
-
36
-
-
12444256820
-
A method for calling gains and losses in array CGH data
-
WANG, P., KIM, Y., POLLACK, J., NARASIMHAN, B. AND TIBSHIRANI, R. (2004). A method for calling gains and losses in array CGH data. Biostatistics 6, 45-58.
-
(2004)
Biostatistics
, vol.6
, pp. 45-58
-
-
WANG, P.1
KIM, Y.2
POLLACK, J.3
NARASIMHAN, B.4
TIBSHIRANI, R.5
-
37
-
-
27944455289
-
A comparison study: Applying segmentation to array CGH data for downstream analyses
-
WILLENBROCK, H. AND FRIDLYAND, J. (2005). A comparison study: applying segmentation to array CGH data for downstream analyses. Bioinformatics 21, 4084-4091.
-
(2005)
Bioinformatics
, vol.21
, pp. 4084-4091
-
-
WILLENBROCK, H.1
FRIDLYAND, J.2
-
38
-
-
33645520900
-
Clustering categorical data based on distance vectors
-
ZHANG, P., WANG, X. AND SONG, P. X. K. (2006). Clustering categorical data based on distance vectors. Journal of the American Statistical Association 101, 355-367.
-
(2006)
Journal of the American Statistical Association
, vol.101
, pp. 355-367
-
-
ZHANG, P.1
WANG, X.2
SONG, P.X.K.3
-
39
-
-
24944501423
-
Generative model-based document clustering: A comparative study
-
ZHONG, S. AND GHOSH, J. (2004). Generative model-based document clustering: a comparative study. Knowledge and Information Systems 8, 374-384.
-
(2004)
Knowledge and Information Systems
, vol.8
, pp. 374-384
-
-
ZHONG, S.1
GHOSH, J.2
|