Pyrene degradation and copper and zinc uptake by Fusarium solani and Hypocrea lixii isolated from petrol station soil

Journal of Applied Microbiology

Volumn 108, Issue 6, 2010, Pages 2030-2040

  Hong, J W ^a   Park, J Y ^a   Gadd, G M ^a  

^a UNIVERSITY OF DUNDEE   (United Kingdom)

Author keywords

Copper; Fungi; Fusarium solani; Hypocrea lixii; Lead; Pyrene; Zinc

Indexed keywords

BIOCHEMISTRY; BIODEGRADATION; BIOREMEDIATION; BIOTECHNOLOGY; CONTAMINATION; COPPER; HEAVY METALS; LEAD COMPOUNDS; PYRENE; SOIL POLLUTION; SOILS; ZINC COMPOUNDS;

COPPER AND ZINC; DRY WEIGHT; FUSARIUM SOLANI; HYPOCREA; HYPOCREUM LIXII; LEAD; METAL-CONTAMINATED SOILS; PETROL STATIONS; TOXIC METALS; ZINC;

FUNGI;

COPPER; LEAD; PYRENE; ZINC; ZINC PHOSPHATE;

BIOACCUMULATION; BIODEGRADATION; BIOLOGICAL UPTAKE; BIOREMEDIATION; COPPER; DEGRADATION; FUNGUS; LEAD; ORGANIC POLLUTANT; PAH; PYRENE; SOIL BIOTA; SOIL POLLUTION; SOLUBILIZATION; ZINC;

ARTICLE; BIOACCUMULATION; BIOREMEDIATION; CONTROLLED STUDY; FUNGAL BIOMASS; FUNGAL STRAIN; FUNGUS GROWTH; FUNGUS ISOLATION; FUSARIUM SOLANI; HYPOCREA LIXII; MICROBIAL DEGRADATION; MYCELIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PETROCHEMICAL INDUSTRY; SOIL POLLUTION; WASTE COMPONENT REMOVAL;

FUNGI; FUSARIUM SOLANI; HYPOCREA LIXII;

EID: 77952212716     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2009.04613.x     Document Type: Article

References (66)

1. Akhtar, K., Akhtar, M.W. Khalid, A.M. (2007) Removal and recovery of uranium from aqueous solutions by Trichoderma harzianum. Water Res 41, 1366 1378.
2. Al-Heeti, M.B. Sinclair, J.B. (1988) Antagonism between Gliocladium roseum, Trichoderma harzianum, or Trichothecium roseum and Phytophthora megasperma f. sp. glycinea. Mycopathol 103, 135 140.
3. Alloway, B.J. Ayres, D.C. (1997) Chemical Principles of Environmental Pollution.
4. Altomare, C., Norvell, W.A., Bjorkman, T. Herman, G.E. (1999) Solubilization of phosphates and micronutrients by the plant-growth-promoting and biocontrol fungus Trichoderma harzianum Rifai 1295-22. Appl Environ Microbiol 65, 2926 2933.
5. Altschul, S.F., Gish, W., Miller, W., Myers, E.W. Lipman, D.J. (1990) Basic local alignment search tool. J Mol Biol 215, 403 410.
6. April, T.M., Foght, J.M. Currah, R.S. (2000) Hydrocarbon-degrading filamentous fungi isolated from flare pit soils in northern and western Canada. Can J Microbiol 46, 38 49.
7. Atlas, R.M. Cerniglia, C.E. (1995) Bioremediation of petroleum pollutants. Bioscience 45, 332 338.
8. Bailey, B.A. Lumsden, R.D. (1998) Direct effects of Trichoderma and Gliocladium on plant growth and resistance to pathogens. In Trichoderma and Gliocladium ed. Harman, G. Kubicek, C. pp. 185 204.
9. Boonchan, S., Britz, M.L. Stanley, G.A. (2000) Degradation and mineralization of high-molecular-weight polycyclic aromatic hydrocarbons by defined fungal-bacterial cocultures. Appl Environ Microbiol 66, 1007 1019.
10. Cerniglia, C.E. (1997) Fungal metabolism of polycyclic aromatic hydrocarbons: past, present and future applications in bioremediation. J Ind Microbiol Biotechnol 19, 324 333.
11. Cerniglia, C.E. Sutherland, J.B. (2001) Bioremediation of polycyclic aromatic hydrocarbons by ligninolytic and non-ligninolytic fungi. In Fungi in Bioremediation ed. Gadd, G.M. pp. 136 187.
12. Chaverri, P., Castlebury, L.A., Samuels, G.J. Geiser, D.M. (2003) Multilocus phylogenetic structure within the Trichoderma harzianum/Hypocrea lixii complex. Mol Phylogenet Evol 27, 302 313.
13. Chulalaksananukul, S., Gadd, G.M., Sangvanich, P., Sihanonth, P., Piapukiew, J. Vangnai, A.S. (2006) Biodegradation of benzo(a)pyrene by a newly isolated Fusarium sp. FEMS Microbiol Lett 262, 99 106.
14. Druzhinina, I., Kopchinskiy, A.G., Komon, M., Bissett, J., Szakacs, G. Kubicek, C.P. (2005) An oligonucleotide barcode for species identification in Trichoderma and Hypocrea. Fungal Genet Biol 42, 813 828.
15. Felfenstein, J. (1985) Confidence limits on phylogenetics: an approach using the bootstrap. Evolution 39, 783 791.
16. Fomina, M., Hillier, S., Charnock, J.M., Melville, K., Alexander, I.J. Gadd, G.M. (2005a) Role of oxalic acid overexcretion in toxic metal mineral transformations by Beauveria caledonica. Appl Environ Microbiol 71, 371 381.
17. Fomina, M.A., Alexander, I.J., Colpaert, J.V. Gadd, G.M. (2005b) Solubilization of toxic metal minerals and metal tolerance of mycorrhizal fungi. Soil Biol Biochem 37, 851 866.
18. Gadd, G.M. (1993) Interactions of fungi with toxic metals. New Phytol 124, 25 60.
19. Gadd, G.M. (2000) Bioremedial potential of microbial mechanisms of metal mobilization and immobilization. Curr Opin Biotechnol 11, 271 279.
20. Gadd, G.M. (2001) Metal transformations. In Fungi in Bioremediation ed. Gadd, G.M. pp. 359 382.
21. Gadd, G.M. (2004a) Mycotransformation of organic and inorganic substrates. Mycologist 18, 60 70.
22. Gadd, G.M. (2004b) Microbial influence on metal motility and application for bioremediation. Geoderma 122, 109 119.
23. Gadd, G.M. (2007) Geomycology: biogeochemical transformations of rocks, minerals, metals and radionuclides by fungi, bioweathering and bioremediation. Mycol Res 111, 3 49.
24. Gadd, G.M. (2009) Biosorption: critical review of scientific rationale, environmental importance and significance for pollution treatment. J Chem Technol Biotechnol 84, 13 28.
25. Gadd, G.M. Griffiths, A.J. (1978) Microorganisms and heavy metal toxicity. Microb Ecol 4, 303 317.
26. Gardes, M. Bruns, T.D. (1993) ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol 2, 113 118.
27. Goodyear, K.L. McNeill, S. (1999) Bioaccumulation of heavy metals by aquatic macro-invertebrates of different feeding guilds: a review. Sci Total Environ 229, 1 19.
28. Harris, J.L. (1986) Modified method for fungal slide culture. J Clin Microbiol 24, 460 461.
29. Hashem, A.R. Bahkali, A.H. (1994) Toxicity of cobalt and nickel to Fusarium solani isolated from Saudi Arabian soil. Qatar Univ Sci J 14, 63 65.
30. Kenealy, W. Zeikus, J. (1981) Influence of corrinoid antagonists on methanogen metabolism. J Bacteriol 146, 133 140.
31. Kleifeld, O. Chet, I. (1992) Trichoderma harzianum- interaction with plants and effect on growth response. Plant Soil 144, 267 272.
32. Krantz-Rulcker, C., Allard, B. Schnurer, J. (1993) Interactions between a soil fungus, Trichoderma harzianum, and IIb metals-adsorption to mycelium and production of complexing metabolites. Biometals 6, 223 230.
33. Ledin, M., Krantz-Rulcker, C. Allard, B. (1999) Microorganisms as metal sorbents: comparison with other soil constituents in multi-compartment systems. Soil Biol Biochem 31, 1639 1648.
34. Lokesha, S. Somashekar, R.K. (1989) Biosorption potency of heavy metals by some fungi. Curr Sci 58, 571 573.
35. Mahasin, T. Hughes, J. (1997) Degradation of polycyclic aromatic hydrocarbons (PAHs) by indigenous mixed and pure cultures isolated from coastal sediments. Appl Biochem Biotechnol 63, 865 870.
36. Massaccesi, G., Romero, M.C., Cazau, M.C. Bucsinszky, A.M. (2002) Cadmium removal capacities of filamentous soil fungi isolated from industrially polluted sediments in La Plata (Argentina). World J Microbiol Biotechnol 18, 817 820.
37. Mathew, M., Obbard, J.P., Ting, Y.P., Gin, Y.H. Tan, H.M. (1999) Bioremediation of oil contaminated beach sediments using indigenous microorganisms in Singapore. Acta Biotechnol 19, 225 233.
38. Milagres, A.M.F., Machuca, A. Napoleao, D. (1999) Detection of siderophore production from several fungi and bacteria by a modification of chrome azurol S (CAS) agar plate assay. J Microbiol Meth 37, 1 6.
39. Morehead, N.R., Eadie, B.J., Lake, B., Landrum, P.F. Berner, D. (1986) The sorption of PAH onto dissolved organic matter in Lake Michigan waters. Chemosphere 4, 403 412.
40. Morley, G.F. Gadd, G.M. (1995) Sorption of toxic metals by fungi and clay minerals. Mycol Res 99, 1429 1438.
41. Neu, M.P. (2000) Siderophore-mediated chemistry and microbial uptake of plutonium. Los Alamos Sci 26, 416 417.
42. 14C-labeled aromatic acids by Fusarium solani. Appl Environ Microbiol 40, 376 380.
43. Novotny, C., Erbanova, P., Sasek, V., Kubatova, A., Cajthaml, T., Lang, E., Krahl, J. Zadrazil, F. (1999) Extracellular oxidative enzyme production and PAH removal in soil by exploratory mycelium of white rot fungi. Biodegradation 10, 159 168.
44. Olajire Abbas, A. Brack, W. (2005) Polycyclic aromatic hydrocarbons in Niger Delta soil: contamination sources and profiles. Int J Environ Sci Technol 2, 343 352.
45. Potin, O., Veignie, E. Rafin, C. (2004) Biodegradation of polycyclic aromatic hydrocarbons (PAHs) by Cladosporium sphaerospermum isolated from an aged PAH contaminated soil. FEMS Microbiol Ecol 51, 71 78.
46. Rafin, C., Potin, O., Veignie, E., Lounes-Hadj Sahraoui, A. Sancholle, M. (2000) Degradation of benzo[a]pyrene as sole carbon source by a non white rot fungus Fusarium solani. Polycycl Aromat Compd 21, 311 329.
47. Ravelet, C., Krivobok, S., Sage, L. Steiman, R. (2000) Biodegradation of pyrene by sediment fungi. Chemosphere 40, 557 563.
48. Renshaw, J.C., Robson, G.D., Trinci, A.P.J., Wiebe, M.G., Livens, F.R., Collison, D. Taylor, R.J. (2002) Fungal siderophores: structures, functions and applications. Mycol Res 106, 1123 1142.
49. Rodriguez, A., Perestelo, F., Carnicero, A., Regalado, V., Perez, R., De la Fuente, G. Falcon, M.A. (1996) Degradation of natural lignins and lignocellulosic substrates by soil-inhabiting fungi imperfecti. FEMS Microbiol Ecol 21, 213 219.
50. Romero, M.C., Salvioli, M.L., Cazau, M.C. Arambarri, A.M. (2002) Pyrene degradation by yeasts and filamentous fungi. Environ Pollut 117, 159 163.
51. Saitou, N. Nei, M. (1987) The neighbor-joining method - a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406 425.
52. Saraswathy, A. Hallberg, R. (2002) Degradation of pyrene by indigenous fungi from a former gasworks site. FEMS Microbiol Lett 210, 227 232.
53. Sayer, J.A. Gadd, G.M. (1997) Solubilization and transformation of insoluble inorganic metal compounds to insoluble metal oxalates by Aspergillus niger. Mycol Res 101, 653 661.
54. Schwyn, B. Neilands, J.B. (1987) Universal chemical assay for the detection and determination of siderophores. Anal Biochem 160, 47 56.
55. Sen, M., Dastidar, M.G. Roychoudhury, P.K. (2007) Biological removal of Cr(VI) using Fusarium solani in batch and continuous modes of operation. Enzyme Microbial Technol 41, 51 56.
56. da Silva, M., Cerniglia, C.E., Pothuluri, J.V., Canhos, V.P. Esposito, E. (2003) Screening filamentous fungi isolated from estuarine sediments for the ability to oxidize polycyclic aromatic hydrocarbons. World J Microbiol Biotechnol 19, 399 405.
57. Sivan, A., Ucko, O. Chet, I. (1987) Biological control of Fusarium crown rot of tomato by Trichoderma harzianum under field conditions. Plant Dis 71, 587 592.
58. Sutherland, J.B. (1992) Detoxification of polycyclic aromatic hydrocarbons by fungi. J Ind Microbiol Biotechnol 9, 53 61.
59. Tamamura, S., Sato, T., Ota, Y., Wang, X., Tang, N. Hayakawa, K. (2007) Long-range transport of polycyclic aromatic hydrocarbons (PAHs) from the eastern Asian continent to Kanazawa, Japan with Asian dust. Atmos Environ 41, 2580 2593.
60. Tamura, K., Dudley, J., Nei, M. Kumar, S. (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596 1599.
61. Tekere, M., Read, J.S. Mattiasson, B. (2005) Polycyclic aromatic hydrocarbon biodegradation in extracellular fluids and static batch cultures of selected sub-tropical white rot fungi. J Biotechnol 115, 367 377.
62. Verdin, A., Lounes-Hadj Sahraoui, A. Durand, R. (2004) Degradation of benzo[a]pyrene by mitosporic fungi and extracellular oxidative enzymes. Int Biodeterior Biodegradation 53, 65 70.
63. Verdin, A., Lounes-Hadj Sahraoui, A., Newsam, R., Robinson, G. Durand, R. (2005) Polycyclic aromatic hydrocarbons storage by Fusarium solani in intracellular lipid vesicles. Environ Pollut 133, 283 291.
64. White, T.J., Bruns, T., Lee, S. Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications ed. Innis, M.A., Gelfand, D.H., Sninsky, J.J. White, T.J. pp. 315 322.
65. Zhang, H.B., Luo, Y.M., Wong, M.H., Zhao, Q.G. Zhang, G.L. (2006a) Distributions and Concentrations of PAHs in Hong Kong Soils. Environ Pollut 141, 107 114.
66. Zhang, N., O'Donnell, K., Sutton, D.A., Nalim, F.A., Summerbell, R.C., Padhye, A.A. Geiser, D.M. (2006b) Members of the Fusarium solani species complex that cause infections in both humans and plants are common in the environment. J Clin Microbiol 44, 2186 2190.