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Volumn 39, Issue 4, 2010, Pages 679-688

Expression and structural characterization of peripherin/RDS, a membrane protein implicated in photoreceptor outer segment morphology

Author keywords

Circular dichroism; Peripherin 2; Pichia; Protein threading; Retinitis pigmentosa; S2 cells

Indexed keywords

INTERMEDIATE FILAMENT PROTEIN; MEMBRANE PROTEIN; NERVE PROTEIN; PERIPHERIN;

EID: 77952099176     PISSN: 01757571     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00249-009-0553-7     Document Type: Article
Times cited : (10)

References (36)
  • 1
    • 0027190754 scopus 로고
    • Evaluation of proteins from UV circular dichroism using an unsupervised learning nearal network
    • 10.1093/protein/6.4.383 1:CAS:528:DyaK3sXkvFSmsbg%3D
    • MA Andrade P Chacon JJ Merelo F Moran 1993 Evaluation of proteins from UV circular dichroism using an unsupervised learning nearal network Prot Eng 6 383 390 10.1093/protein/6.4.383 1:CAS:528:DyaK3sXkvFSmsbg%3D
    • (1993) Prot Eng , vol.6 , pp. 383-390
    • Andrade, M.A.1    Chacon, P.2    Merelo, J.J.3    Moran, F.4
  • 2
    • 48449106792 scopus 로고    scopus 로고
    • The Jpred 3 secondary structure prediction server
    • 10.1093/nar/gkn238 1:CAS:528:DC%2BD1cXptlKkt7w%3D 18463136
    • C Cole JD Barber GJ Barton 2008 The Jpred 3 secondary structure prediction server Nucleic Acids Res 36 W197 W201 10.1093/nar/gkn238 1:CAS:528:DC%2BD1cXptlKkt7w%3D 18463136
    • (2008) Nucleic Acids Res , vol.36
    • Cole, C.1    Barber, J.D.2    Barton, G.J.3
  • 3
    • 33947660904 scopus 로고    scopus 로고
    • Peripherin-2: An intracellular analogy to viral fusion proteins
    • DOI 10.1021/bi061820c
    • TC Edrington VR Lapointe PL Yeagle CL Gretzula K Boesze-Battaglia 2007 Peripherin-2: an intracellular analogy to viral fusion proteins Biochemistry 46 3605 3613 10.1021/bi061820c 1:CAS:528:DC%2BD2sXitFWgu7w%3D 17323921 (Pubitemid 46493461)
    • (2007) Biochemistry , vol.46 , Issue.12 , pp. 3605-3613
    • Edrington V, T.C.1    Lapointe, V.R.2    Yeagle, P.L.3    Gretzula, C.L.4    Boesze-Battaglia, K.5
  • 4
    • 0035900699 scopus 로고    scopus 로고
    • Folding and subunit assembly of photoreceptor peripherin/rds is mediated by determinants within the extracellular/intradiskal EC2 domain: Implications for heterogeneous molecular pathologies
    • 10.1074/jbc.M107511200 1:CAS:528:DC%2BD3MXptlemurY%3D 11553636
    • AFX Goldberg LM Fales N Khattree JB Hurley 2001 Folding and subunit assembly of photoreceptor peripherin/rds is mediated by determinants within the extracellular/intradiskal EC2 domain: implications for heterogeneous molecular pathologies J Biol Chem 276 42700 42706 10.1074/jbc.M107511200 1:CAS:528:DC%2BD3MXptlemurY%3D 11553636
    • (2001) J Biol Chem , vol.276 , pp. 42700-42706
    • Goldberg, A.F.X.1    Fales, L.M.2    Khattree, N.3    Hurley, J.B.4
  • 5
    • 0344708475 scopus 로고    scopus 로고
    • Tetraspanin Proteins Mediate Cellular Penetration, Invasion, and Fusion Events and Define a Novel Type of Membrane Microdomain
    • DOI 10.1146/annurev.cellbio.19.111301.153609
    • ME Hemler 2003 Tetraspanin proteins mediate cellular penetration invasion and fusion events, and define a novel type of membrane microdomain Annu Rev Cell Dev Biol 19 397 422 10.1146/annurev.cellbio.19.111301.153609 1:CAS:528:DC%2BD3sXpsFamt7s%3D 14570575 (Pubitemid 37487354)
    • (2003) Annual Review of Cell and Developmental Biology , vol.19 , pp. 397-422
    • Hemler, M.E.1
  • 6
    • 28444441957 scopus 로고    scopus 로고
    • Tetraspanin functions and associated microdomains
    • DOI 10.1038/nrm1736
    • ME Hemler 2005 Tetraspanin functions and associated microdomains Nat Rev Mol Cell Biol 6 801 811 10.1038/nrm1736 1:CAS:528:DC%2BD2MXhtFertbrK 16314869 (Pubitemid 41726118)
    • (2005) Nature Reviews Molecular Cell Biology , vol.6 , Issue.10 , pp. 801-811
    • Hemler, M.E.1
  • 8
    • 77952092380 scopus 로고    scopus 로고
    • Invitrogen In: Corporation I (ed) San Diego
    • Invitrogen (2003) Drosophila expression system. In: Corporation I (ed) San Diego
    • (2003) Drosophila Expression System
  • 10
    • 0020997912 scopus 로고
    • Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
    • 10.1002/bip.360221211 1:CAS:528:DyaL2cXkslegtQ%3D%3D 6667333
    • W Kabsch C Sander 1983 Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features Biopolymers 22 2577 2637 10.1002/bip.360221211 1:CAS:528:DyaL2cXkslegtQ%3D%3D 6667333
    • (1983) Biopolymers , vol.22 , pp. 2577-2637
    • Kabsch, W.1    Sander, C.2
  • 11
    • 0035862964 scopus 로고    scopus 로고
    • CD81 extracellular domain 3D structure: Insight into the tetraspanin superfamily structural motifs
    • DOI 10.1093/emboj/20.1.12
    • K Kitadokoro D Bordo G Galli R Petracca F Falugi S Abrignani G Grandi M Bolognesi 2001 CD81 extracellular domain 3D structure: insight into the tetraspanin superfamily structural motifs EMBO J 20 12 18 10.1093/emboj/20.1.12 1:CAS:528:DC%2BD3MXhvVCmtrg%3D 11226150 (Pubitemid 32099097)
    • (2001) EMBO Journal , vol.20 , Issue.1-2 , pp. 12-18
    • Kitadokoro, K.1    Bordo, D.2    Galli, G.3    Petracca, R.4    Falugi, F.5    Abrignani, S.6    Grandi, G.7    Bolognesi, M.8
  • 12
    • 0029881007 scopus 로고    scopus 로고
    • MOLMOL: A program for display and analysis of macromolecular structures
    • DOI 10.1016/0263-7855(96)00009-4
    • R Koradi M Billeter K Wuthrich 1996 MOLMOL: a program for display and analysis of macromolecular structures J Mol Graph 14 51 55 10.1016/0263-7855(96) 00009-4 1:CAS:528:DyaK28Xis12nsrc%3D 8744573 (Pubitemid 26152976)
    • (1996) Journal of Molecular Graphics , vol.14 , Issue.1 , pp. 51-55
    • Koradi, R.1    Billeter, M.2    Wuthrich, K.3
  • 13
    • 34748886142 scopus 로고    scopus 로고
    • Functional implications of tetraspanin proteins in cancer biology
    • DOI 10.1111/j.1349-7006.2007.00584.x
    • PA Lazo 2007 Functional implications of tetraspanin proteins in cancer biology Cancer Sci 98 1666 1677 10.1111/j.1349-7006.2007.00584.x 1:CAS:528:DC%2BD2sXht1eis7vF 17727684 (Pubitemid 47487899)
    • (2007) Cancer Science , vol.98 , Issue.11 , pp. 1666-1677
    • Lazo, P.A.1
  • 14
    • 0031895778 scopus 로고    scopus 로고
    • CD81 (TAPA-1): A molecule involved in signal transduction and cell adhesion in the immune system
    • DOI 10.1146/annurev.immunol.16.1.89
    • S Levy SC Todd HT Maecker 1998 CD81 (TAPA-1): a molecule involved in signal transduction and cell adhesion in the immune system Annu Rev Immunol 16 89 109 10.1146/annurev.immunol.16.1.89 1:CAS:528:DyaK1cXislyitrY%3D 9597125 (Pubitemid 28183360)
    • (1998) Annual Review of Immunology , vol.16 , pp. 89-109
    • Levy, S.1    Todd, S.C.2    Maecker, H.T.3
  • 15
    • 30344460705 scopus 로고    scopus 로고
    • Structure of DDB1 in complex with a paramyxovirus V protein: Viral Hijack of a propeller cluster in ubiquitin ligase
    • DOI 10.1016/j.cell.2005.10.033, PII S009286740501233X
    • T Li X Chen KC Garbutt P Zhou N Zheng 2006 Structure of DDB1 in complex with a paramyxovirus V protein: viral hijack of a propeller cluster in ubiquitin ligase Cell 13 105 117 10.1016/j.cell.2005.10.033 (Pubitemid 43069313)
    • (2006) Cell , vol.124 , Issue.1 , pp. 105-117
    • Li, T.1    Chen, X.2    Garbutt, K.C.3    Zhou, P.4    Zheng, N.5
  • 16
    • 0034052943 scopus 로고    scopus 로고
    • Disulfide-mediated oligomerization of peripherin/Rds and Rom-1 in photoreceptor disk membranes: Implications for photoreceptor outer segment morphogenesis and degeneration
    • DOI 10.1074/jbc.275.8.5370
    • CJR Loewen RS Molday 2000 Disulfide-mediate oligomerization of peripherin/RDS and Rom-1 in photoreceptor disk membranes J Biol Chem 275 5370 5378 10.1074/jbc.275.8.5370 1:CAS:528:DC%2BD3cXhsFKks7k%3D 10681511 (Pubitemid 30115167)
    • (2000) Journal of Biological Chemistry , vol.275 , Issue.8 , pp. 5370-5378
    • Loewen, C.J.R.1    Molday, R.S.2
  • 17
    • 0035933756 scopus 로고    scopus 로고
    • Molecular characterization of peripherin-2 and Rom-1 mutants responsible for digenic retinitis pigmentosa
    • 10.1074/jbc.M011710200 1:CAS:528:DC%2BD3MXkvVamsrs%3D 11297544
    • CJ Loewen OL Moritz RS Molday 2001 Molecular characterization of peripherin-2 and Rom-1 mutants responsible for digenic retinitis pigmentosa J Biol Chem 276 22388 22396 10.1074/jbc.M011710200 1:CAS:528:DC%2BD3MXkvVamsrs%3D 11297544
    • (2001) J Biol Chem , vol.276 , pp. 22388-22396
    • Loewen, C.J.1    Moritz, O.L.2    Molday, R.S.3
  • 18
    • 0041467780 scopus 로고    scopus 로고
    • The role of subunit assembly in peripherin-2 targeting to rod photoreceptor disk membranes and retinitis pigmentosa
    • DOI 10.1091/mbc.E03-02-0077
    • CJ Loewen OL Moritz BM Tam DS Papermaster RS Molday 2003 The role of subunit assembly in peripherin-2 targeting to rod photoreceptor disk membranes and retinitis pigmentosa Mol Biol Cell 14 3400 3413 10.1091/mbc.E03-02-0077 1:CAS:528:DC%2BD3sXmvFWks7Y%3D 12925772 (Pubitemid 37013136)
    • (2003) Molecular Biology of the Cell , vol.14 , Issue.8 , pp. 3400-3413
    • Loewen, C.J.R.1    Moritz, O.L.2    Tam, B.M.3    Papermaster, D.S.4    Molday, R.S.5
  • 19
    • 40649090353 scopus 로고    scopus 로고
    • Concentration independent estimation of protein secondary structure by circular dichroism; A comparison of methods
    • 10.1016/j.ab.2008.01.024 1:CAS:528:DC%2BD1cXjtleqtro%3D 18294952
    • P McPhie 2008 Concentration independent estimation of protein secondary structure by circular dichroism; a comparison of methods Anal Biochem 375 379 381 10.1016/j.ab.2008.01.024 1:CAS:528:DC%2BD1cXjtleqtro%3D 18294952
    • (2008) Anal Biochem , vol.375 , pp. 379-381
    • McPhie, P.1
  • 20
    • 0023064180 scopus 로고
    • Peripherin. A rim-specific membrane protein of rod outer segment discs
    • RS Molday D Hicks L Molday 1987 Peripherin. A rim specific membrane protein of rod outer segment discs Invest Ophthalmol Vis Sci 28 50 61 1:CAS:528:DyaL2sXhvFWgtbY%3D 2433249 (Pubitemid 17230190)
    • (1987) Investigative Ophthalmology and Visual Science , vol.28 , Issue.1 , pp. 50-61
    • Molday, R.S.1    Hicks, D.2    Molday, L.3
  • 21
    • 0036389620 scopus 로고    scopus 로고
    • Deletional analysis of the rod photoreceptor cell peripherin/RDS carboxy-terminal region
    • 10.1006/exer.2002.2013 1:CAS:528:DC%2BD38XlsVamsL8%3D 12137760
    • S Muller-Weeks K Boesze-Battaglia C Fitzgerald 2002 Deletional analysis of the rod photoreceptor cell peripherin/RDS carboxy-terminal region Exp Eye Res 75 143 154 10.1006/exer.2002.2013 1:CAS:528:DC%2BD38XlsVamsL8%3D 12137760
    • (2002) Exp Eye Res , vol.75 , pp. 143-154
    • Muller-Weeks, S.1    Boesze-Battaglia, K.2    Fitzgerald, C.3
  • 22
    • 0030932129 scopus 로고    scopus 로고
    • Crystal structure of a polyhistidine-tagged recombinant catalytic subunit of camp-dependent protein kinase complexed with the peptide inhibitor PKI(5-24) and adenosine
    • DOI 10.1021/bi961947+
    • N Narayana S Cox S Shaltiel SS Taylor N-h Xuong 1997 Crystal structure of a polyhistidine-tagged recombinant catalytic subunit of camp-dependent protein kinase complexed with the peptide inhibitor PKI(5-24) and adenosine Biochemistry 36 4438 4448 10.1021/bi961947+ 1:CAS:528:DyaK2sXisF2ksrk%3D 9109651 (Pubitemid 27180290)
    • (1997) Biochemistry , vol.36 , Issue.15 , pp. 4438-4448
    • Narayana, N.1    Cox, S.2    Shaltiel, S.3    Taylor, S.S.4    Xuong, N.-H.5
  • 23
    • 33645535034 scopus 로고    scopus 로고
    • G protein-coupled receptor rhodopsin
    • DOI 10.1146/annurev.biochem.75.103004.142743
    • K Palczewski 2006 G protein-coupled receptor rhodopsin Annu Rev Biochem 75 743 767 10.1146/annurev.biochem.75.103004.142743 1:CAS:528: DC%2BD28XosVKhsLY%3D 16756510 (Pubitemid 44118051)
    • (2006) Annual Review of Biochemistry , vol.75 , pp. 743-767
    • Palczewski, K.1
  • 24
    • 0035813029 scopus 로고    scopus 로고
    • Equine herpesvirus 1 glycoprotein D expressed in Pichia pastoris is hyperglycosylated and elicits a protective immune response in the mouse model of EHV-1 disease
    • DOI 10.1016/S0168-1702(01)00337-9, PII S0168170201003379
    • KM Ruitenberg JR Gilkerson JE Wellington DN Love JM Whalley 2001 Equine herpesvirus 1 glycoprotein D expressed in Pichia pastoris is hyperglycosylated and elicits a protective immune response in the mouse model of EHV-1 disease Virus Res 79 125 135 10.1016/S0168-1702(01)00337-9 1:CAS:528: DC%2BD3MXmsleitb8%3D 11551653 (Pubitemid 32817163)
    • (2001) Virus Research , vol.79 , Issue.1-2 , pp. 125-135
    • Ruitenberg, K.M.1    Gilkerson, J.R.2    Wellington, J.E.3    Love, D.N.4    Whalley J.Millar5
  • 26
    • 33644820905 scopus 로고    scopus 로고
    • Complete predicted three-dimensional structure of the facilitator transmembrane protein and hepatitis C virus receptor CD81: Conserved and variable domains in the tetraspanin superfamily
    • 10.1529/biophysj.105.069666 1:CAS:528:DC%2BD2MXhtlertrbE 16352525
    • M Seigneuret 2006 Complete predicted three-dimensional structure of the facilitator transmembrane protein and hepatitis C virus receptor CD81: conserved and variable domains in the tetraspanin superfamily Biophys J 90 212 217 10.1529/biophysj.105.069666 1:CAS:528:DC%2BD2MXhtlertrbE 16352525
    • (2006) Biophys J , vol.90 , pp. 212-217
    • Seigneuret, M.1
  • 27
    • 0028060401 scopus 로고
    • Retinitis pigmentosa and related disorders: Phenotypes of rhodopsin and peripherin/RDS mutatations
    • 10.1002/ajmg.1320520413 1:STN:280:DyaK2M3ms1Kjug%3D%3D 7747760
    • BS Shastry 1994 Retinitis pigmentosa and related disorders: phenotypes of rhodopsin and peripherin/RDS mutatations Am J Med Genet 52 467 474 10.1002/ajmg.1320520413 1:STN:280:DyaK2M3ms1Kjug%3D%3D 7747760
    • (1994) Am J Med Genet , vol.52 , pp. 467-474
    • Shastry, B.S.1
  • 28
    • 0029927505 scopus 로고    scopus 로고
    • Mass spectrometric sequencing of proteins from silver-stained polyacrylamide gels
    • DOI 10.1021/ac950914h
    • A Shevchenko M Wilm O Vorm M Mann 1996 Mass spectrometry sequencing of protein from silver-stained polyacrylamide gels Anal Chem 68 850 858 10.1021/ac950914h 1:CAS:528:DyaK28XntlygtA%3D%3D 8779443 (Pubitemid 26101214)
    • (1996) Analytical Chemistry , vol.68 , Issue.5 , pp. 850-858
    • Shevchenko, A.1    Wilm, M.2    Vorm, O.3    Mann, M.4
  • 29
    • 0034672325 scopus 로고    scopus 로고
    • Estimation of protein secondary structure from circular dichroism spectra: Comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set
    • DOI 10.1006/abio.2000.4880
    • N Sreerama R Woody 2000 Estimation of protein secondary structure from CD spectra: comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set Anal Biochem 282 252 260 10.1006/abio.2000.4880 (Pubitemid 32006234)
    • (2000) Analytical Biochemistry , vol.287 , Issue.2 , pp. 252-260
    • Sreerama, N.1    Woody, R.W.2
  • 30
    • 48449095093 scopus 로고    scopus 로고
    • High-level expression, single-step iummunoaffinity purification and characterization of human tetraspanin membrane protein CD81
    • 10.1371/journal.pone.0002314
    • H Takayama P Chelikani PJ Reeves S Zhang HG Khorana 2008 High-level expression, single-step iummunoaffinity purification and characterization of human tetraspanin membrane protein CD81 PLoS One 3 1 7 10.1371/journal.pone. 0002314
    • (2008) PLoS One , vol.3 , pp. 1-7
    • Takayama, H.1    Chelikani, P.2    Reeves, P.J.3    Zhang, S.4    Khorana, H.G.5
  • 31
    • 3242877618 scopus 로고    scopus 로고
    • DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data
    • DOI 10.1093/nar/gkh371
    • L Whitmore BA Wallace 2004 DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data Nucleic Acids Res 32 W668 W673 10.1093/nar/gkh371 1:CAS:528:DC%2BD2cXlvFKmsbc%3D 15215473 (Pubitemid 38997420)
    • (2004) Nucleic Acids Research , vol.32 , Issue.WEB SERVER ISS.
    • Whitmore, L.1    Wallace, B.A.2
  • 32
    • 0034607831 scopus 로고    scopus 로고
    • Peripherin/rds influences membrane vesicle morphology. Implications for retinopathies
    • DOI 10.1074/jbc.C900853199
    • JDJ Wrigley T Ahmed CL Nevett JBC Findlay 2000 Peripherin/rds influences membrane vesicle morphology J Biol Chem 275 13191 13194 10.1074/jbc.C900853199 1:CAS:528:DC%2BD3cXjtFyks7w%3D 10747861 (Pubitemid 30257372)
    • (2000) Journal of Biological Chemistry , vol.275 , Issue.18 , pp. 13191-13194
    • Wrigley, J.D.J.1    Ahmed, T.2    Nevett, C.L.3    Findlay, J.B.C.4
  • 34
    • 39449115394 scopus 로고    scopus 로고
    • I-TASSER server for protein 3D structure prediction
    • Zhang Y (2008) I-TASSER server for protein 3D structure prediction. BMC Bioinformatics 9
    • (2008) BMC Bioinformatics , vol.9
    • Zhang, Y.1
  • 35
    • 10344232638 scopus 로고    scopus 로고
    • Scoring function for automated assessment of protein structure template quality
    • DOI 10.1002/prot.20264
    • Y Zhang J Skolnick 2004 Scoring function for automated assessment of protein structure template quality Proteins 57 702 710 10.1002/prot.20264 1:CAS:528:DC%2BD2cXhtVaqtLvI 15476259 (Pubitemid 39626992)
    • (2004) Proteins: Structure, Function and Genetics , vol.57 , Issue.4 , pp. 702-710
    • Zhang, Y.1    Skolnick, J.2
  • 36
    • 0345742565 scopus 로고    scopus 로고
    • CD81 is required for Hepatitis C virus glycoprotein-mediated viral infection
    • DOI 10.1128/JVI.78.3.1448-1455.2004
    • J Zhang G Randall A Higginbottom P Monk CM Rice JA McKeating 2004 CD81 is required for hepatitis C virus glycoprotein-mediated viral infection J Virol 78 1448 1455 10.1128/JVI.78.3.1448-1455.2004 1:CAS:528:DC%2BD2cXmsFWjtQ%3D%3D 14722300 (Pubitemid 38095855)
    • (2004) Journal of Virology , vol.78 , Issue.3 , pp. 1448-1455
    • Zhang, J.1    Randall, G.2    Higginbottom, A.3    Monk, P.4    Rice, C.M.5    McKeating, J.A.6


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