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Volumn 11, Issue 2, 2010, Pages 539-546

Temporal genetic samples indicate small effective population size of the endangered yellow-eyed penguin

Author keywords

Island; Megadyptes antipodes; Microsatellites; Museum specimens; New Zealand; Temporal method

Indexed keywords

ENDANGERED SPECIES; GENETIC MARKER; IMMIGRATION; MUSEUM; POPULATION BOTTLENECK; POPULATION SIZE; SEABIRD;

EID: 77952093963     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-009-9988-8     Document Type: Article
Times cited : (18)

References (55)
  • 1
    • 0036035830 scopus 로고    scopus 로고
    • A comparison of genetic diversity between the Galapagos Penguin and the Magellanic Penguin
    • Akst EP, Boersma PD, Fleischer RC (2002) A comparison of genetic diversity between the Galapagos Penguin and the Magellanic Penguin. Conserv Genet 3: 375-383.
    • (2002) Conserv Genet , vol.3 , pp. 375-383
    • Akst, E.P.1    Boersma, P.D.2    Fleischer, R.C.3
  • 2
    • 84987223380 scopus 로고
    • Genetic drift and the loss of alleles versus heterozygosity
    • Allendorf FW (1986) Genetic drift and the loss of alleles versus heterozygosity. Zoo Biol 5: 181-190.
    • (1986) Zoo Biol , vol.5 , pp. 181-190
    • Allendorf, F.W.1
  • 3
    • 0043210659 scopus 로고    scopus 로고
    • Estimation of population growth or decline in genetically monitored populations
    • Beaumont MA (2003) Estimation of population growth or decline in genetically monitored populations. Genetics 164: 1139-1160.
    • (2003) Genetics , vol.164 , pp. 1139-1160
    • Beaumont, M.A.1
  • 6
    • 0036191720 scopus 로고    scopus 로고
    • Likelihood-based estimation of the effective population size using temporal changes in allele frequencies: A genealogical approach
    • Berthier P, Beaumont MA, Cornuet JM, Luikart G (2002) Likelihood-based estimation of the effective population size using temporal changes in allele frequencies: a genealogical approach. Genetics 160: 741-751.
    • (2002) Genetics , vol.160 , pp. 741-751
    • Berthier, P.1    Beaumont, M.A.2    Cornuet, J.M.3    Luikart, G.4
  • 7
    • 50849116074 scopus 로고    scopus 로고
    • Isolation and characterization of microsatellite loci from the yellow-eyed penguin (Megadyptes antipodes)
    • Boessenkool S, King TM, Seddon PJ, Waters JM (2008) Isolation and characterization of microsatellite loci from the yellow-eyed penguin (Megadyptes antipodes). Mol Ecol Resour 8: 1043-1045.
    • (2008) Mol Ecol Resour , vol.8 , pp. 1043-1045
    • Boessenkool, S.1    King, T.M.2    Seddon, P.J.3    Waters, J.M.4
  • 9
    • 65949113400 scopus 로고    scopus 로고
    • Multilocus assignment analyses reveal multiple units and rare migration events in the recently expanded yellow-eyed penguin (Megadyptes antipodes)
    • Boessenkool S, Star B, Waters JM, Seddon PJ (2009b) Multilocus assignment analyses reveal multiple units and rare migration events in the recently expanded yellow-eyed penguin (Megadyptes antipodes). Mol Ecol 18: 2390-2400.
    • (2009) Mol Ecol , vol.18 , pp. 2390-2400
    • Boessenkool, S.1    Star, B.2    Waters, J.M.3    Seddon, P.J.4
  • 10
    • 77952091115 scopus 로고    scopus 로고
    • Components influencing lifetime reproductive success in yellow-eyed penguins
    • University of Otago, Dunedin
    • Bull E (2005) Components influencing lifetime reproductive success in yellow-eyed penguins. Bachelor of Science (Honours) thesis. Department of Zoology, University of Otago, Dunedin.
    • (2005) Bachelor of Science (Honours) thesis. Department of Zoology
    • Bull, E.1
  • 11
    • 0035421167 scopus 로고    scopus 로고
    • Where protection is not enough: Active conservation in New Zealand
    • Clout M (2001) Where protection is not enough: active conservation in New Zealand. Trends Ecol Evol 16: 415-416.
    • (2001) Trends Ecol Evol , vol.16 , pp. 415-416
    • Clout, M.1
  • 12
    • 0002754106 scopus 로고
    • Breeding biology of the yellow-eyed penguin (Megadyptes antipodes)
    • L. S. Davis and J. T. Darby (Eds.), San Diego: Academic Press Inc
    • Darby JT, Seddon PJ (1990) Breeding biology of the yellow-eyed penguin (Megadyptes antipodes). In: Davis LS, Darby JT (eds) Penguin biology. Academic Press Inc, San Diego, pp 45-62.
    • (1990) Penguin Biology , pp. 45-62
    • Darby, J.T.1    Seddon, P.J.2
  • 13
    • 8644223252 scopus 로고    scopus 로고
    • Extinction and endemism in the New Zealand avifauna
    • Duncan RP, Blackburn TM (2004) Extinction and endemism in the New Zealand avifauna. Global Ecol Biogeogr 13: 509-517.
    • (2004) Global Ecol Biogeogr , vol.13 , pp. 509-517
    • Duncan, R.P.1    Blackburn, T.M.2
  • 14
    • 0005108829 scopus 로고    scopus 로고
    • Can artificial brood reduction assist the conservation of yellow-eyed penguins (Megadyptes antipodes)?
    • Efford MG, Edge KA (1998) Can artificial brood reduction assist the conservation of yellow-eyed penguins (Megadyptes antipodes)? Anim Conserv 1: 263-271.
    • (1998) Anim Conserv , vol.1 , pp. 263-271
    • Efford, M.G.1    Edge, K.A.2
  • 15
    • 0028874989 scopus 로고
    • Effective population size/adult population size ratios in wildlife-a review
    • Frankham R (1995) Effective population size/adult population size ratios in wildlife-a review. Genet Res 66: 95-107.
    • (1995) Genet Res , vol.66 , pp. 95-107
    • Frankham, R.1
  • 17
    • 0003085678 scopus 로고
    • Evolutionary change in small populations
    • M. E. Soule and B. A. Wilcox (Eds.), Sunderland: Sinauer Associates
    • Franklin IR (1980) Evolutionary change in small populations. In: Soule ME, Wilcox BA (eds) Conservation biology: an evolutionary-ecological perspective. Sinauer Associates, Sunderland.
    • (1980) Conservation Biology: An Evolutionary-Ecological Perspective
    • Franklin, I.R.1
  • 18
    • 0002281255 scopus 로고    scopus 로고
    • How large must populations be to retain evolutionary potential?
    • Franklin IR, Frankham R (1998) How large must populations be to retain evolutionary potential? Anim Conserv 1: 69-70.
    • (1998) Anim Conserv , vol.1 , pp. 69-70
    • Franklin, I.R.1    Frankham, R.2
  • 19
    • 34548567145 scopus 로고    scopus 로고
    • Comparative estimation of effective population sizes and temporal gene flow in two contrasting population systems
    • Fraser DJ, Hansen MM, Ostergaard S, Tessier N, Legault M, Bernatchez L (2007a) Comparative estimation of effective population sizes and temporal gene flow in two contrasting population systems. Mol Ecol 16: 3866-3889.
    • (2007) Mol Ecol , vol.16 , pp. 3866-3889
    • Fraser, D.J.1    Hansen, M.M.2    Ostergaard, S.3    Tessier, N.4    Legault, M.5    Bernatchez, L.6
  • 20
    • 34247598261 scopus 로고    scopus 로고
    • Loss of historical immigration and the unsuccessful rehabilitation of extirpated salmon populations
    • Fraser DJ, Jones MW, McParland TL, Hutchings JA (2007b) Loss of historical immigration and the unsuccessful rehabilitation of extirpated salmon populations. Conserv Genet 8: 527-546.
    • (2007) Conserv Genet , vol.8 , pp. 527-546
    • Fraser, D.J.1    Jones, M.W.2    McParland, T.L.3    Hutchings, J.A.4
  • 21
    • 0002099805 scopus 로고
    • Deaths in yellow-eyed penguins (Megadyptes antipodes) on the Otago Peninsula during the summer of 1990
    • Gill JM, Darby JT (1993) Deaths in yellow-eyed penguins (Megadyptes antipodes) on the Otago Peninsula during the summer of 1990. New Zeal Vet J 41: 39-42.
    • (1993) New Zeal Vet J , vol.41 , pp. 39-42
    • Gill, J.M.1    Darby, J.T.2
  • 23
    • 0036898987 scopus 로고    scopus 로고
    • Long-term effective population sizes, temporal stability of genetic composition and potential for local adaptation in anadromous brown trout (Salmo trutta) populations
    • Hansen MM, Ruzzante DE, Nielsen EE, Bekkevold D, Mensberg KLD (2002) Long-term effective population sizes, temporal stability of genetic composition and potential for local adaptation in anadromous brown trout (Salmo trutta) populations. Mol Ecol 11: 2523-2535.
    • (2002) Mol Ecol , vol.11 , pp. 2523-2535
    • Hansen, M.M.1    Ruzzante, D.E.2    Nielsen, E.E.3    Bekkevold, D.4    Mensberg, K.L.D.5
  • 24
    • 34247872841 scopus 로고    scopus 로고
    • Has the debate over genetics and extinction of island endemics truly been resolved?
    • Jamieson IG (2007) Has the debate over genetics and extinction of island endemics truly been resolved? Anim Conserv 10: 139-144.
    • (2007) Anim Conserv , vol.10 , pp. 139-144
    • Jamieson, I.G.1
  • 25
    • 46849118037 scopus 로고    scopus 로고
    • Managing genetic diversity in threatened populations: A New Zealand perspective
    • Jamieson IG, Grueber CE, Waters JM, Gleeson DM (2008) Managing genetic diversity in threatened populations: a New Zealand perspective. New Zeal J Ecol 32: 130-137.
    • (2008) New Zeal J Ecol , vol.32 , pp. 130-137
    • Jamieson, I.G.1    Grueber, C.E.2    Waters, J.M.3    Gleeson, D.M.4
  • 26
    • 35549004419 scopus 로고    scopus 로고
    • Unbiased estimator for genetic drift and effective population size
    • Jorde PE, Ryman N (2007) Unbiased estimator for genetic drift and effective population size. Genetics 177: 927-935.
    • (2007) Genetics , vol.177 , pp. 927-935
    • Jorde, P.E.1    Ryman, N.2
  • 27
    • 0036568655 scopus 로고    scopus 로고
    • Inbreeding effects in wild populations
    • Keller LF, Waller DM (2002) Inbreeding effects in wild populations. Trends Ecol Evol 17: 230-241.
    • (2002) Trends Ecol Evol , vol.17 , pp. 230-241
    • Keller, L.F.1    Waller, D.M.2
  • 28
    • 0030050477 scopus 로고    scopus 로고
    • The role of genetic variation in adaptation and population persistence in a changing environment
    • Lande R, Shannon S (1996) The role of genetic variation in adaptation and population persistence in a changing environment. Evolution 50: 434-437.
    • (1996) Evolution , vol.50 , pp. 434-437
    • Lande, R.1    Shannon, S.2
  • 29
    • 33645676302 scopus 로고    scopus 로고
    • Genetic approaches for estimating the effective size of populations
    • Leberg P (2005) Genetic approaches for estimating the effective size of populations. J Wildl Manage 69: 1385-1399.
    • (2005) J Wildl Manage , vol.69 , pp. 1385-1399
    • Leberg, P.1
  • 30
    • 0001921823 scopus 로고    scopus 로고
    • The critical effective size for a genetically secure population
    • Lynch M, Lande R (1998) The critical effective size for a genetically secure population. Anim Conserv 1: 70-72.
    • (1998) Anim Conserv , vol.1 , pp. 70-72
    • Lynch, M.1    Lande, R.2
  • 32
    • 0035174852 scopus 로고    scopus 로고
    • Historical records of yellow-eyed penguin (Megadyptes antipodes) in southern New Zealand
    • Moore PJ (2001) Historical records of yellow-eyed penguin (Megadyptes antipodes) in southern New Zealand. Notornis 48: 145-156.
    • (2001) Notornis , vol.48 , pp. 145-156
    • Moore, P.J.1
  • 33
    • 0019776310 scopus 로고
    • Genetic drift and estimation of effective population size
    • Nei M, Tajima F (1981) Genetic drift and estimation of effective population size. Genetics 98: 625-640.
    • (1981) Genetics , vol.98 , pp. 625-640
    • Nei, M.1    Tajima, F.2
  • 34
    • 77952091302 scopus 로고    scopus 로고
    • Climate change: Projections for New Zealand
    • NIWA, Wellington, New Zealand. Available from, Downloaded on: 15 March 2009
    • NIWA (2008) Climate change: projections for New Zealand. National institute of water & atmospheric research, Wellington, New Zealand. Available from www. niwascience. co. nz/ncc/clivar/scenarios. Downloaded on: 15 March 2009.
    • (2008) National institute of water & atmospheric research
  • 35
    • 0033067498 scopus 로고    scopus 로고
    • The effective size of a hierarchically structured population
    • Nunney L (1999) The effective size of a hierarchically structured population. Evolution 53: 1-10.
    • (1999) Evolution , vol.53 , pp. 1-10
    • Nunney, L.1
  • 36
    • 47649115949 scopus 로고    scopus 로고
    • Genetic estimates of contemporary effective population size: What can they tell us about the importance of genetic stochasticity for wild population persistence?
    • Palstra FP, Ruzzante DE (2008) Genetic estimates of contemporary effective population size: what can they tell us about the importance of genetic stochasticity for wild population persistence? Mol Ecol 17: 3428-3447.
    • (2008) Mol Ecol , vol.17 , pp. 3428-3447
    • Palstra, F.P.1    Ruzzante, D.E.2
  • 37
    • 0034483932 scopus 로고    scopus 로고
    • Investigations into climate change influence on population dynamics of yellow-eyed penguins Megadyptes antipodes
    • Peacock L, Paulin M, Darby JT (2000) Investigations into climate change influence on population dynamics of yellow-eyed penguins Megadyptes antipodes. New Zeal J Zool 27: 317-325.
    • (2000) New Zeal J Zool , vol.27 , pp. 317-325
    • Peacock, L.1    Paulin, M.2    Darby, J.T.3
  • 39
    • 0020960732 scopus 로고
    • A new method for estimating the effective population size from allele frequency changes
    • Pollak E (1983) A new method for estimating the effective population size from allele frequency changes. Genetics 104: 531-548.
    • (1983) Genetics , vol.104 , pp. 531-548
    • Pollak, E.1
  • 40
    • 0000625869 scopus 로고
    • Analyzing tables of statistical tests
    • Rice WR (1989) Analyzing tables of statistical tests. Evolution 43: 223-225.
    • (1989) Evolution , vol.43 , pp. 223-225
    • Rice, W.R.1
  • 42
    • 36849080837 scopus 로고    scopus 로고
    • GENEPOP '007: A complete re-implementation of the GENEPOP software for Windows and Linux
    • Rousset F (2008) GENEPOP '007: a complete re-implementation of the GENEPOP software for Windows and Linux. Mol Ecol Resour 8: 103-106.
    • (2008) Mol Ecol Resour , vol.8 , pp. 103-106
    • Rousset, F.1
  • 43
    • 0242485246 scopus 로고    scopus 로고
    • Microsatellite amplification from museum feather samples: Effects of fragment size and template concentration on genotyping errors
    • Sefc KM, Payne RB, Sorenson MD (2003) Microsatellite amplification from museum feather samples: effects of fragment size and template concentration on genotyping errors. Auk 120: 982-989.
    • (2003) Auk , vol.120 , pp. 982-989
    • Sefc, K.M.1    Payne, R.B.2    Sorenson, M.D.3
  • 45
    • 3142749747 scopus 로고    scopus 로고
    • Comparative evaluation of a new effective population size estimator based on approximate Bayesian computation
    • Tallmon DA, Luikart G, Beaumont MA (2004) Comparative evaluation of a new effective population size estimator based on approximate Bayesian computation. Genetics 167: 977-988.
    • (2004) Genetics , vol.167 , pp. 977-988
    • Tallmon, D.A.1    Luikart, G.2    Beaumont, M.A.3
  • 46
    • 0025257791 scopus 로고
    • Effects of food variability on growth rates, fledging sizes and reproductive success in the yellow-eyed penguin Megadyptes antipodes
    • van Heezik Y, Davis L (1990) Effects of food variability on growth rates, fledging sizes and reproductive success in the yellow-eyed penguin Megadyptes antipodes. Ibis 132: 354-365.
    • (1990) Ibis , vol.132 , pp. 354-365
    • van Heezik, Y.1    Davis, L.2
  • 47
    • 0025923821 scopus 로고
    • Chelex-100 as a medium for simple extraction of DNA for PCR-based typing from forensic material
    • Walsh PS, Metzger DA, Higuchi R (1991) Chelex-100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. Biotechniques 10: 506-513.
    • (1991) Biotechniques , vol.10 , pp. 506-513
    • Walsh, P.S.1    Metzger, D.A.2    Higuchi, R.3
  • 48
    • 36549023365 scopus 로고    scopus 로고
    • Back to the future: Museum specimens in population genetics
    • Wandeler P, Hoeck PE, Keller LF (2007) Back to the future: museum specimens in population genetics. Trends Ecol Evol 22: 634-642.
    • (2007) Trends Ecol Evol , vol.22 , pp. 634-642
    • Wandeler, P.1    Hoeck, P.E.2    Keller, L.F.3
  • 49
    • 0035704882 scopus 로고    scopus 로고
    • A pseudo-likelihood method for estimating effective population size from temporally spaced samples
    • Wang JL (2001) A pseudo-likelihood method for estimating effective population size from temporally spaced samples. Genet Res 78: 243-257.
    • (2001) Genet Res , vol.78 , pp. 243-257
    • Wang, J.L.1
  • 50
    • 0037280106 scopus 로고    scopus 로고
    • Estimating effective population size and migration rates from genetic samples over space and time
    • Wang JL, Whitlock MC (2003) Estimating effective population size and migration rates from genetic samples over space and time. Genetics 163: 429-446.
    • (2003) Genetics , vol.163 , pp. 429-446
    • Wang, J.L.1    Whitlock, M.C.2
  • 51
    • 0024498122 scopus 로고
    • A generalized approach for estimating effective population size from temporal changes in allele frequency
    • Waples RS (1989) A generalized approach for estimating effective population size from temporal changes in allele frequency. Genetics 121: 379-391.
    • (1989) Genetics , vol.121 , pp. 379-391
    • Waples, R.S.1
  • 52
    • 33846483038 scopus 로고    scopus 로고
    • Temporal estimates of effective population size in species with overlapping generations
    • Waples RS, Yokota M (2007) Temporal estimates of effective population size in species with overlapping generations. Genetics 175: 219-233.
    • (2007) Genetics , vol.175 , pp. 219-233
    • Waples, R.S.1    Yokota, M.2
  • 53
    • 0031001580 scopus 로고    scopus 로고
    • The effective size of a subdivided population
    • Whitlock MC, Barton NH (1997) The effective size of a subdivided population. Genetics 146: 427-441.
    • (1997) Genetics , vol.146 , pp. 427-441
    • Whitlock, M.C.1    Barton, N.H.2
  • 55
    • 0001771498 scopus 로고
    • Evolution in Mendelian populations
    • Wright S (1931) Evolution in Mendelian populations. Genetics 16: 97-159.
    • (1931) Genetics , vol.16 , pp. 97-159
    • Wright, S.1


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