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Volumn 11, Issue 2, 2010, Pages 399-408

Applying QTL analysis to conservation genetics

Author keywords

Chicken; Genetic modeling; QTL analysis; Segregation of alleles; Wild domestic hybrids

Indexed keywords

ALLELE; CONSERVATION GENETICS; GENETIC ANALYSIS; GENETICS; HYBRID; POULTRY; WILD POPULATION;

EID: 77952093179     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-009-0036-5     Document Type: Article
Times cited : (6)

References (50)
  • 1
    • 0031966959 scopus 로고    scopus 로고
    • Multipoint quantitative-trait linkage analysis in general pedigrees
    • Almasy L, Blangero J (1998) Multipoint quantitative-trait linkage analysis in general pedigrees. Am J Hum Genet 62: 1198-1211.
    • (1998) Am J Hum Genet , vol.62 , pp. 1198-1211
    • Almasy, L.1    Blangero, J.2
  • 2
    • 34250718803 scopus 로고    scopus 로고
    • A unified model for functional and statistical epistasis and its application in quantitative trait loci analysis
    • Álvarez-Castro JM, Carlborg Ö (2007) A unified model for functional and statistical epistasis and its application in quantitative trait loci analysis. Genetics 176: 1151-1167.
    • (2007) Genetics , vol.176 , pp. 1151-1167
    • Álvarez-castro, J.M.1    Carlborg, O.2
  • 3
    • 44449116784 scopus 로고    scopus 로고
    • How to perform meaningful estimates of genetic effects
    • Álvarez-Castro JM, Le Rouzic A, Carlborg Ö (2008) How to perform meaningful estimates of genetic effects. PLoS Genet 4(5): e1000062.
    • (2008) PLoS Genet , vol.4 , Issue.5
    • Álvarez-Castro, J.M.1    Le Rouzic, A.2    Carlborg, O.3
  • 4
    • 0035043379 scopus 로고    scopus 로고
    • The role of hybridization in evolution
    • Barton NH (2001) The role of hybridization in evolution. Mol Ecol 10: 551-568.
    • (2001) Mol Ecol , vol.10 , pp. 551-568
    • Barton, N.H.1
  • 5
    • 0002348364 scopus 로고
    • Proceedings of 49th annual corn and sorghum research conference. American Seed Trade Association, Washington, DC
    • Beavis WD (1994) The power and deceit of QTL experiments: lessons from comparative QTL studies. In: Proceedings of 49th annual corn and sorghum research conference. American Seed Trade Association, Washington, DC, pp 250-266.
    • (1994) The power and deceit of QTL experiments: Lessons from comparative QTL studies , pp. 250-266
    • Beavis, W.D.1
  • 6
    • 59449083513 scopus 로고    scopus 로고
    • Genetic analysis of local Vietnamese chickens provides evidence of gene flow from wild to domestic populations
    • doi: 10. 1186/1471-2156-10-1
    • Berthouly C, Leroy G, Nhu van T, Hoang Thanh H, Bed'Hom B et al. (2009) Genetic analysis of local Vietnamese chickens provides evidence of gene flow from wild to domestic populations. BMC Genet 10. doi: 10. 1186/1471-2156-10-1.
    • (2009) BMC Genet 10
    • Berthouly, C.1    Leroy, G.2    Nhu van, T.3    Hoang, T.H.4    Bed'Hom, B.5
  • 7
    • 0036251086 scopus 로고    scopus 로고
    • The use of randomization testing for detection of multiple epistatic QTL
    • Carlborg Ö, Andersson L (2002) The use of randomization testing for detection of multiple epistatic QTL. Genet Res 79: 175-184.
    • (2002) Genet Res , vol.79 , pp. 175-184
    • Carlborg, O.1    Andersson, L.2
  • 8
    • 0033879555 scopus 로고    scopus 로고
    • The use of a genetic algorithm for simultaneous mapping of multiple interacting quantitative trait loci
    • Carlborg Ö, Andersson L, Kinghorn B (2000) The use of a genetic algorithm for simultaneous mapping of multiple interacting quantitative trait loci. Genetics 155: 2003-2010.
    • (2000) Genetics , vol.155 , pp. 2003-2010
    • Carlborg, O.1    Andersson, L.2    Kinghorn, B.3
  • 9
    • 0037350268 scopus 로고    scopus 로고
    • A global search reveals epistatic interaction between QTL for early growth in the chicken
    • Carlborg Ö, Kerje S, Shütz K, Jacobson L, Jensen P, Andersson L (2003) A global search reveals epistatic interaction between QTL for early growth in the chicken. Genome Res 13: 413-421.
    • (2003) Genome Res , vol.13 , pp. 413-421
    • Carlborg, O.1    Kerje, S.2    Shütz, K.3    Jacobson, L.4    Jensen, P.5    Andersson, L.6
  • 10
    • 0028909487 scopus 로고
    • Epistasis and its contribution to genetic variance components
    • Cheverud JM, Routman EJ (1995) Epistasis and its contribution to genetic variance components. Genetics 139: 1455-1461.
    • (1995) Genetics , vol.139 , pp. 1455-1461
    • Cheverud, J.M.1    Routman, E.J.2
  • 11
    • 0027230981 scopus 로고
    • QTL analysis of transgressive segregation in an interspecific tomato cross
    • de Vicente MC, Tanksley SD (1993) QTL analysis of transgressive segregation in an interspecific tomato cross. Genetics 134: 585-596.
    • (1993) Genetics , vol.134 , pp. 585-596
    • de Vicente, M.C.1    Tanksley, S.D.2
  • 12
    • 0001244316 scopus 로고
    • Marked-assisted selection using best linear unbiased prediction
    • Fernando RL, Grossman M (1989) Marked-assisted selection using best linear unbiased prediction. Genet Sel Evol 21: 467-477.
    • (1989) Genet Sel Evol , vol.21 , pp. 467-477
    • Fernando, R.L.1    Grossman, M.2
  • 13
    • 0001077470 scopus 로고
    • The correlation between relatives on the supposition of Mendelian inheritance
    • Fisher RA (1918) The correlation between relatives on the supposition of Mendelian inheritance. Trans R Soc Edinb 52: 339-433.
    • (1918) Trans R Soc Edinb , vol.52 , pp. 339-433
    • Fisher, R.A.1
  • 14
    • 0033382319 scopus 로고    scopus 로고
    • Quantitative genetics in conservation biology
    • Frankham R (1999) Quantitative genetics in conservation biology. Genet Res 74: 237-244.
    • (1999) Genet Res , vol.74 , pp. 237-244
    • Frankham, R.1
  • 15
    • 0025245437 scopus 로고
    • Multipoint analysis of human quantitative genetic variation
    • Goldgar DE (1990) Multipoint analysis of human quantitative genetic variation. Am J Hum Genet 47: 957-967.
    • (1990) Am J Hum Genet , vol.47 , pp. 957-967
    • Goldgar, D.E.1
  • 16
    • 0035198377 scopus 로고    scopus 로고
    • Modeling genetic architecture: A multilinear theory of gene interaction
    • Hansen TF, Wagner GP (2001) Modeling genetic architecture: a multilinear theory of gene interaction. Theor Popul Biol 59: 61-86.
    • (2001) Theor Popul Biol , vol.59 , pp. 61-86
    • Hansen, T.F.1    Wagner, G.P.2
  • 17
    • 0041488856 scopus 로고    scopus 로고
    • The two-fold difference in adult size between the Red Jungle fowl and White Leghorn Chickens is largely explained by a limited number of QTLs
    • Kerje S, Carlborg Ö, Schutz K, Jacobsson L, Jensen P, Andersson L (2003) The two-fold difference in adult size between the Red Jungle fowl and White Leghorn Chickens is largely explained by a limited number of QTLs. Anim Genet 34: 264-274.
    • (2003) Anim Genet , vol.34 , pp. 264-274
    • Kerje, S.1    Carlborg, O.2    Schutz, K.3    Jacobsson, L.4    Jensen, P.5    Andersson, L.6
  • 18
    • 58549098760 scopus 로고    scopus 로고
    • New answers for old questions: The evolutionary quantitative genetics of wild animal populations
    • Kruuk LEB, Slate J, Wilson AJ (2008) New answers for old questions: the evolutionary quantitative genetics of wild animal populations. Annu Rev Ecol Evol Syst 39: 525-548.
    • (2008) Annu Rev Ecol Evol Syst , vol.39 , pp. 525-548
    • Kruuk, L.E.B.1    Slate, J.2    Wilson, A.J.3
  • 19
    • 0024508964 scopus 로고
    • Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps
    • Lander ES, Botstein D (1989) Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121: 185-199.
    • (1989) Genetics , vol.121 , pp. 185-199
    • Lander, E.S.1    Botstein, D.2
  • 20
    • 53749090751 scopus 로고    scopus 로고
    • Estimation of genetic effects and genotype-phenotype maps
    • Le Rouzic A, Álvarez-Castro JM (2008) Estimation of genetic effects and genotype-phenotype maps. Evol Bioinform 4: 225-235.
    • (2008) Evol Bioinform , vol.4 , pp. 225-235
    • Le Rouzic, A.1    Álvarez-Castro, J.M.2
  • 21
    • 52049106813 scopus 로고    scopus 로고
    • Dissection of the genetic architecture of body weight in chicken reveals the impact of epistasis on domestication traits
    • Le Rouzic A, Álvarez-Castro JM, Carlborg Ö (2008) Dissection of the genetic architecture of body weight in chicken reveals the impact of epistasis on domestication traits. Genetics 179: 1591-1599.
    • (2008) Genetics , vol.179 , pp. 1591-1599
    • Le Rouzic, A.1    Álvarez-Castro, J.M.2    Carlborg, O.3
  • 23
    • 67651108806 scopus 로고    scopus 로고
    • The genetics of quantitative traits: Challenges and prospects
    • Mackay TFC, Stone EA, Ayroles JF (2009) The genetics of quantitative traits: challenges and prospects. Nat Rev Genet 10: 565-578.
    • (2009) Nat Rev Genet , vol.10 , pp. 565-578
    • Mackay, T.F.C.1    Stone, E.A.2    Ayroles, J.F.3
  • 24
    • 0036603630 scopus 로고    scopus 로고
    • Adaptive population divergence: Markers, QTL and traits
    • McKay JK, Latta R (2002) Adaptive population divergence: markers, QTL and traits. TREE 17: 285-292.
    • (2002) Tree , vol.17 , pp. 285-292
    • McKay, J.K.1    Latta, R.2
  • 25
    • 0034055765 scopus 로고    scopus 로고
    • Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci
    • Meuwissen THE, Goddard ME (2000) Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci. Genetics 155: 421-430.
    • (2000) Genetics , vol.155 , pp. 421-430
    • Meuwissen, T.H.E.1    Goddard, M.E.2
  • 26
    • 0028813264 scopus 로고
    • The molecular basis of quantitative genetic variation in natural populations
    • Mitchell-Olds T (1995) The molecular basis of quantitative genetic variation in natural populations. Trends Ecol Evol 10: 324-328.
    • (1995) Trends Ecol Evol , vol.10 , pp. 324-328
    • Mitchell-Olds, T.1
  • 27
    • 0031952090 scopus 로고    scopus 로고
    • A novel method for estimating heritability using molecular markers
    • Mousseau TA, Ritland K, Heath DD (1998) A novel method for estimating heritability using molecular markers. Heredity 80: 218-224.
    • (1998) Heredity , vol.80 , pp. 218-224
    • Mousseau, T.A.1    Ritland, K.2    Heath, D.D.3
  • 28
    • 70349906266 scopus 로고    scopus 로고
    • Sex specific fitness correlates of dispersal in a house-sparrow metapopulation
    • Pärn H, Jensen H, Ringsby TH, Sæther BE (2009) Sex specific fitness correlates of dispersal in a house-sparrow metapopulation. J Anim Ecol 78(6): 1216-1225.
    • (2009) J Anim Ecol , vol.78 , Issue.6 , pp. 1216-1225
    • Pärn, H.1    Jensen, H.2    Ringsby, T.H.3    Sæther, B.E.4
  • 29
    • 40949127393 scopus 로고    scopus 로고
    • How to interpret a genome-wide association study
    • Pearson TA, Manolio TA (2008) How to interpret a genome-wide association study. J Am Med Assoc 299: 1335-1344.
    • (2008) J Am Med Assoc , vol.299 , pp. 1335-1344
    • Pearson, T.A.1    Manolio, T.A.2
  • 30
    • 38849165189 scopus 로고    scopus 로고
    • Wild pedigrees: The way forward
    • Pemberton JM (2008) Wild pedigrees: the way forward. Proc R Soc Lond B 275: 613-621.
    • (2008) Proc R Soc Lond B , vol.275 , pp. 613-621
    • Pemberton, J.M.1
  • 31
    • 0041147355 scopus 로고    scopus 로고
    • Quantitative trait loci mapping in F2 crosses between outbred lines
    • Perez-Enciso M, Varona L (2000) Quantitative trait loci mapping in F2 crosses between outbred lines. Genetics 155: 391-405.
    • (2000) Genetics , vol.155 , pp. 391-405
    • Perez-Enciso, M.1    Varona, L.2
  • 32
    • 37349094161 scopus 로고    scopus 로고
    • Detecting hybridization between wild species and their domesticated relatives
    • Randi E (2008) Detecting hybridization between wild species and their domesticated relatives. Mol Ecol 12: 285-293.
    • (2008) Mol Ecol , vol.12 , pp. 285-293
    • Randi, E.1
  • 33
    • 0032755574 scopus 로고    scopus 로고
    • Transgressive segregation, adaption, and speciation
    • Reiseberg LH, Archer MA, Wayne RK (1999) Transgressive segregation, adaption, and speciation. Heredity 83: 362-372.
    • (1999) Heredity , vol.83 , pp. 362-372
    • Reiseberg, L.H.1    Archer, M.A.2    Wayne, R.K.3
  • 34
    • 0038304502 scopus 로고    scopus 로고
    • The genetic architecture necessary for transgressive segregation is common in both natural and domesticated populations
    • Reiseberg LH, Widmer A, Arntz AM, Burke J (2003) The genetic architecture necessary for transgressive segregation is common in both natural and domesticated populations. Philos Trans R Soc Lond B 358: 1141-1147.
    • (2003) Philos Trans R Soc Lond B , vol.358 , pp. 1141-1147
    • Reiseberg, L.H.1    Widmer, A.2    Arntz, A.M.3    Burke, J.4
  • 35
    • 0033824478 scopus 로고    scopus 로고
    • Marker-inferred relatedness as a tool for detecting heritability in nature
    • Ritland K (2000) Marker-inferred relatedness as a tool for detecting heritability in nature. Mol Ecol 9: 1195-1204.
    • (2000) Mol Ecol , vol.9 , pp. 1195-1204
    • Ritland, K.1
  • 36
    • 45849148191 scopus 로고    scopus 로고
    • An improved method for quantitative trait loci detection and identification of within-line segregation in F2 intercross designs
    • Rönnegård L, Besnier F, Carlborg Ö (2008) An improved method for quantitative trait loci detection and identification of within-line segregation in F2 intercross designs. Genetics 178: 2315-2326.
    • (2008) Genetics , vol.178 , pp. 2315-2326
    • Rönnegård, L.1    Besnier, F.2    Carlborg, O.3
  • 37
    • 33847176604 scopus 로고    scopus 로고
    • A genome-wide association study identifies novel risk loci for type 2 diabetes
    • Sladek R, Rocheleau G, Rung J, Dina C, Shen L et al (2007) A genome-wide association study identifies novel risk loci for type 2 diabetes. Nature 445: 881-885.
    • (2007) Nature , vol.445 , pp. 881-885
    • Sladek, R.1    Rocheleau, G.2    Rung, J.3    Dina, C.4    Shen, L.5
  • 38
    • 13444261413 scopus 로고    scopus 로고
    • QTL mapping in natural populations: Progress, caveats and future directions
    • Slate J (2005) QTL mapping in natural populations: progress, caveats and future directions. Mol Ecol 14: 363-379.
    • (2005) Mol Ecol , vol.14 , pp. 363-379
    • Slate, J.1
  • 40
    • 70149113077 scopus 로고    scopus 로고
    • R Development Core Team, R Foundation for Statistical Computing, Vienna. ISBN 3-900051-07-0, URL
    • R Development Core Team (2009) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna. ISBN 3-900051-07-0, URL http://www. R-project. org.
    • (2009) R: A language and environment for statistical computing
  • 41
    • 31344466234 scopus 로고    scopus 로고
    • The estimation of genetic relationships using molecular markers and their efficiency in estimating heritability in natural populations
    • Thomas SC (2005) The estimation of genetic relationships using molecular markers and their efficiency in estimating heritability in natural populations. Philos Trans R Soc Lond B 360: 1457-1467.
    • (2005) Philos Trans R Soc Lond B , vol.360 , pp. 1457-1467
    • Thomas, S.C.1
  • 42
    • 2442544496 scopus 로고    scopus 로고
    • Sibship reconstruction from genetic data with typing errors
    • Wang JL (2004) Sibship reconstruction from genetic data with typing errors. Genetics 166: 1963-1979.
    • (2004) Genetics , vol.166 , pp. 1963-1979
    • Wang, J.L.1
  • 43
    • 33646238044 scopus 로고    scopus 로고
    • Models and partition of variance for quantitative trait loci with epistasis and linkage disequilibrium
    • Wang T, Zeng ZB (2006) Models and partition of variance for quantitative trait loci with epistasis and linkage disequilibrium. BMC Genet 7: 9.
    • (2006) BMC Genet , vol.7 , pp. 9
    • Wang, T.1    Zeng, Z.B.2
  • 44
    • 0031931251 scopus 로고    scopus 로고
    • Genetic evaluation by best linear unbiased prediction using marker and trait information in a multibreed population
    • Wang T, Fernando RL, Grossman M (1998) Genetic evaluation by best linear unbiased prediction using marker and trait information in a multibreed population. Genetics 148: 507-515.
    • (1998) Genetics , vol.148 , pp. 507-515
    • Wang, T.1    Fernando, R.L.2    Grossman, M.3
  • 46
    • 0034907638 scopus 로고    scopus 로고
    • Predicting the risk of extinction through hybridization
    • Wolf DE, Takebayashi N, Reiseberg LH (2001) Predicting the risk of extinction through hybridization. Conserv Biol 15: 1039-1053.
    • (2001) Conserv Biol , vol.15 , pp. 1039-1053
    • Wolf, D.E.1    Takebayashi, N.2    Reiseberg, L.H.3
  • 48
    • 3843064598 scopus 로고    scopus 로고
    • Epistasis of quantitative trait loci under different gene action models
    • Yang RC (2004) Epistasis of quantitative trait loci under different gene action models. Genetics 167: 1493-1505.
    • (2004) Genetics , vol.167 , pp. 1493-1505
    • Yang, R.C.1
  • 49
    • 77952090455 scopus 로고    scopus 로고
    • Functional and statistical genetic effects with multiple alleles
    • Yang RC, Álvarez-Castro JM (2008) Functional and statistical genetic effects with multiple alleles. Curr Top Genet 3: 49-62.
    • (2008) Curr Top Genet , vol.3 , pp. 49-62
    • Yang, R.C.1    Álvarez-castro, J.M.2
  • 50
    • 17444397012 scopus 로고    scopus 로고
    • Modeling quantitative trait Loci and interpretation of models
    • Zeng ZB, Wang T, Zou W (2005) Modeling quantitative trait Loci and interpretation of models. Genetics 169: 1711-1725.
    • (2005) Genetics , vol.169 , pp. 1711-1725
    • Zeng, Z.B.1    Wang, T.2    Zou, W.3


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