메뉴 건너뛰기




Volumn 11, Issue , 2010, Pages

Evaluating the transferability of Hapmap SNPs to a Singapore Chinese population

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CASE CONTROL STUDY; CHINESE; CHROMOSOME 5Q; CHROMOSOME ANALYSIS; CONTROLLED STUDY; GENE FREQUENCY; GENE IDENTIFICATION; GENE LINKAGE DISEQUILIBRIUM; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC ASSOCIATION; GENOTYPE; GEOGRAPHIC ORIGIN; HUMAN; POPULATION GENETICS; SINGAPORE; SINGLE NUCLEOTIDE POLYMORPHISM; ASIAN; ASTHMA; CHROMOSOME 5; EVALUATION; GENETICS; GENOMICS; HUMAN GENOME; METHODOLOGY;

EID: 77951955523     PISSN: None     EISSN: 14712156     Source Type: Journal    
DOI: 10.1186/1471-2156-11-36     Document Type: Article
Times cited : (21)

References (27)
  • 1
    • 79959524146 scopus 로고    scopus 로고
    • A haplotype map of the human genome
    • 10.1038/nature04226, 1880871, 16255080, Int HapMap C
    • Altshuler D, Brooks LD, Chakravarti A, Collins FS, Daly MJ, Donnelly P, . Int HapMap C A haplotype map of the human genome. Nature 2005, 437(7063):1299-1320. 10.1038/nature04226, 1880871, 16255080, Int HapMap C.
    • (2005) Nature , vol.437 , Issue.7063 , pp. 1299-1320
    • Altshuler, D.1    Brooks, L.D.2    Chakravarti, A.3    Collins, F.S.4    Daly, M.J.5    Donnelly, P.6
  • 2
    • 27644510907 scopus 로고    scopus 로고
    • PPC: an algorithm for accurate estimation of SNP allele frequencies in small equimolar pools of DNA using data from high density microarrays
    • 10.1093/nar/gni142, 1240117, 16199750
    • Brohede J, Dunne R, McKay JD, Hannan GN. PPC: an algorithm for accurate estimation of SNP allele frequencies in small equimolar pools of DNA using data from high density microarrays. Nucleic Acids Research 2005, 33(17). 10.1093/nar/gni142, 1240117, 16199750.
    • (2005) Nucleic Acids Research , vol.33 , Issue.17
    • Brohede, J.1    Dunne, R.2    McKay, J.D.3    Hannan, G.N.4
  • 3
    • 0030688004 scopus 로고    scopus 로고
    • Variations on a theme: Cataloging human DNA sequence variation
    • 10.1126/science.278.5343.1580, 9411782
    • Collins FS, Guyer MS, Chakravarti A. Variations on a theme: Cataloging human DNA sequence variation. Science 1997, 278(5343):1580-1581. 10.1126/science.278.5343.1580, 9411782.
    • (1997) Science , vol.278 , Issue.5343 , pp. 1580-1581
    • Collins, F.S.1    Guyer, M.S.2    Chakravarti, A.3
  • 4
    • 3142773390 scopus 로고    scopus 로고
    • Integrating ethics and science in the international HapMap project
    • 10.1038/nrg1351, 2271136, 15153999, Int HapMap C
    • Foster MW, . Int HapMap C Integrating ethics and science in the international HapMap project. Nature Reviews Genetics 2004, 5(6):467-475. 10.1038/nrg1351, 2271136, 15153999, Int HapMap C.
    • (2004) Nature Reviews Genetics , vol.5 , Issue.6 , pp. 467-475
    • Foster, M.W.1
  • 7
    • 29444450702 scopus 로고    scopus 로고
    • Common deletions and SNPs are in linkage disequilibrium in the human genome
    • 10.1038/ng1695, 16327809
    • Hinds DA, Kloek AP, Jen M, Chen XY, Frazer KA. Common deletions and SNPs are in linkage disequilibrium in the human genome. Nature Genetics 2006, 38(1):82-85. 10.1038/ng1695, 16327809.
    • (2006) Nature Genetics , vol.38 , Issue.1 , pp. 82-85
    • Hinds, D.A.1    Kloek, A.P.2    Jen, M.3    Chen, X.Y.4    Frazer, K.A.5
  • 8
    • 42249087336 scopus 로고    scopus 로고
    • An evaluation of the performance of HapMap SNP data in a Shanghai Chinese population: Analyses of allele frequency, linkage disequilibrium pattern and tagging SNPs transferability on chromosome 1q21-q25
    • 10.1186/1471-2156-9-19, 2292209, 18302794, Int Type 2 Diabet 1q C
    • Hu C, Jia WP, Zhang WH, Wang CR, Zhang R, Wang J, Ma XJ, Xiang KS, . Int Type 2 Diabet 1q C An evaluation of the performance of HapMap SNP data in a Shanghai Chinese population: Analyses of allele frequency, linkage disequilibrium pattern and tagging SNPs transferability on chromosome 1q21-q25. BMC Genetics 2008, 9:19. 10.1186/1471-2156-9-19, 2292209, 18302794, Int Type 2 Diabet 1q C.
    • (2008) BMC Genetics , vol.9 , pp. 19
    • Hu, C.1    Jia, W.P.2    Zhang, W.H.3    Wang, C.R.4    Zhang, R.5    Wang, J.6    Ma, X.J.7    Xiang, K.S.8
  • 9
    • 58449085469 scopus 로고    scopus 로고
    • Invited Commentary: From Genome-Wide Association Studies to Gene-Environment-Wide Interaction Studies-025EFChallenges and Opportunities
    • 10.1093/aje/kwn351, 2727257, 19022826
    • Khoury MJ, Wacholder S. Invited Commentary: From Genome-Wide Association Studies to Gene-Environment-Wide Interaction Studies-025EFChallenges and Opportunities. American Journal of Epidemiology 2009, 169(2):227-230. 10.1093/aje/kwn351, 2727257, 19022826.
    • (2009) American Journal of Epidemiology , vol.169 , Issue.2 , pp. 227-230
    • Khoury, M.J.1    Wacholder, S.2
  • 10
    • 0029805706 scopus 로고    scopus 로고
    • The new genomics: Global views of biology
    • 10.1126/science.274.5287.536, 8928008
    • Lander ES. The new genomics: Global views of biology. Science 1996, 274(5287):536-539. 10.1126/science.274.5287.536, 8928008.
    • (1996) Science , vol.274 , Issue.5287 , pp. 536-539
    • Lander, E.S.1
  • 11
    • 42649111672 scopus 로고    scopus 로고
    • Evaluation of coverage variation of SNP chips for genome-wide association studies
    • 10.1038/sj.ejhg.5202007, 18253166
    • Li MY, Li C, Guan W. Evaluation of coverage variation of SNP chips for genome-wide association studies. European Journal of Human Genetics 2008, 16(5):635-643. 10.1038/sj.ejhg.5202007, 18253166.
    • (2008) European Journal of Human Genetics , vol.16 , Issue.5 , pp. 635-643
    • Li, M.Y.1    Li, C.2    Guan, W.3
  • 12
    • 32244432359 scopus 로고    scopus 로고
    • Comparative study of the linkage disequilibrium of an ENCODE region, chromosome 7p15, in Korean, Japanese, and Han Chinese samples
    • 10.1016/j.ygeno.2005.11.002, 16376517
    • Lim J, Kim YJ, Yoon Y, Kim SO, Kang HJ, Park J, Han AR, Han B, Oh B, Kimm K, et al. Comparative study of the linkage disequilibrium of an ENCODE region, chromosome 7p15, in Korean, Japanese, and Han Chinese samples. Genomics 2006, 87(3):392-398. 10.1016/j.ygeno.2005.11.002, 16376517.
    • (2006) Genomics , vol.87 , Issue.3 , pp. 392-398
    • Lim, J.1    Kim, Y.J.2    Yoon, Y.3    Kim, S.O.4    Kang, H.J.5    Park, J.6    Han, A.R.7    Han, B.8    Oh, B.9    Kimm, K.10
  • 14
    • 43049146524 scopus 로고    scopus 로고
    • A HapMap harvest of insights into the genetics of common disease
    • 10.1172/JCI34772, 2336881, 18451988
    • Manolio TA, Brooks LD, Collins FS. A HapMap harvest of insights into the genetics of common disease. Journal of Clinical Investigation 2008, 118(5):1590-1605. 10.1172/JCI34772, 2336881, 18451988.
    • (2008) Journal of Clinical Investigation , vol.118 , Issue.5 , pp. 1590-1605
    • Manolio, T.A.1    Brooks, L.D.2    Collins, F.S.3
  • 19
    • 58449107994 scopus 로고    scopus 로고
    • Gene-Environment Interaction in Genome-Wide Association Studies
    • 10.1093/aje/kwn353, 2732981, 19022827
    • Murcray CE, Lewinger JP, Gauderman WJ. Gene-Environment Interaction in Genome-Wide Association Studies. American Journal of Epidemiology 2009, 169(2):219-226. 10.1093/aje/kwn353, 2732981, 19022827.
    • (2009) American Journal of Epidemiology , vol.169 , Issue.2 , pp. 219-226
    • Murcray, C.E.1    Lewinger, J.P.2    Gauderman, W.J.3
  • 20
    • 0035451780 scopus 로고    scopus 로고
    • On the allelic spectrum of human disease
    • 10.1016/S0168-9525(01)02410-6, 11525833
    • Reich DE, Lander ES. On the allelic spectrum of human disease. Trends in Genetics 2001, 17(9):502-510. 10.1016/S0168-9525(01)02410-6, 11525833.
    • (2001) Trends in Genetics , vol.17 , Issue.9 , pp. 502-510
    • Reich, D.E.1    Lander, E.S.2
  • 21
    • 37549035426 scopus 로고    scopus 로고
    • HapMap coverage for SNPs in the Japanese population
    • 10.1007/s10038-007-0221-7, 18043864
    • Takeuchi F, Serizawa M, Kato N. HapMap coverage for SNPs in the Japanese population. Journal of Human Genetics 2008, 53(1):96-99. 10.1007/s10038-007-0221-7, 18043864.
    • (2008) Journal of Human Genetics , vol.53 , Issue.1 , pp. 96-99
    • Takeuchi, F.1    Serizawa, M.2    Kato, N.3
  • 22
    • 0034926075 scopus 로고    scopus 로고
    • Genetic susceptibility to asthma and atopy among Chinese in Singapore - linkage to markers on chromosome 5q31-33
    • 10.1034/j.1398-9995.2001.056008749.x, 11488668
    • Shek LPC, Tay AHN, Chew FT, Goh DLM, Lee BW. Genetic susceptibility to asthma and atopy among Chinese in Singapore - linkage to markers on chromosome 5q31-33. Allergy 2001, 56(8):749-753. 10.1034/j.1398-9995.2001.056008749.x, 11488668.
    • (2001) Allergy , vol.56 , Issue.8 , pp. 749-753
    • Shek, L.P.C.1    Tay, A.H.N.2    Chew, F.T.3    Goh, D.L.M.4    Lee, B.W.5
  • 24
    • 33749405883 scopus 로고    scopus 로고
    • How well do HapMap SNPs capture the untyped SNPs?
    • 10.1186/1471-2164-7-238, 1586200, 16982009
    • Tantoso E, Yang YC, Li KB. How well do HapMap SNPs capture the untyped SNPs?. BMC Genomics 2006, 7:238. 10.1186/1471-2164-7-238, 1586200, 16982009.
    • (2006) BMC Genomics , vol.7 , pp. 238
    • Tantoso, E.1    Yang, Y.C.2    Li, K.B.3
  • 25
    • 0002486655 scopus 로고    scopus 로고
    • Unit 2.1A: Purification and Concentration of DNA from Aqueous Solutions
    • Moore DDD. Unit 2.1A: Purification and Concentration of DNA from Aqueous Solutions. Current Protocols in Molecular Biology 2002,
    • (2002) Current Protocols in Molecular Biology
    • Moore, D.D.D.1
  • 26
    • 33746512512 scopus 로고    scopus 로고
    • Principal components analysis corrects for stratification in genome-wide association studies
    • 10.1038/ng1847, 16862161
    • Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, Reich D. Principal components analysis corrects for stratification in genome-wide association studies. Nature Genetics 2006, 38(8):904-909. 10.1038/ng1847, 16862161.
    • (2006) Nature Genetics , vol.38 , Issue.8 , pp. 904-909
    • Price, A.L.1    Patterson, N.J.2    Plenge, R.M.3    Weinblatt, M.E.4    Shadick, N.A.5    Reich, D.6
  • 27
    • 34547092673 scopus 로고    scopus 로고
    • Evaluating the performance of commercial whole-genome marker sets for capturing common genetic variation
    • 10.1186/1471-2164-8-159, 1780048, 17210083
    • Magi R, Pfeufer A, Nelis M, Montpetit A, Metspalu A, Remm M. Evaluating the performance of commercial whole-genome marker sets for capturing common genetic variation. BMC Genomics 2007, 8:8. 10.1186/1471-2164-8-159, 1780048, 17210083.
    • (2007) BMC Genomics , vol.8 , pp. 8
    • Magi, R.1    Pfeufer, A.2    Nelis, M.3    Montpetit, A.4    Metspalu, A.5    Remm, M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.