Viral quasispecies profiles as the result of the interplay of competition and cooperation

BMC Evolutionary Biology

Volumn 10, Issue 1, 2010, Pages

  Arbiza, Juan ^a   Mirazo, Santiago ^a   Fort, Hugo ^b  

^a UNIVERSIDAD DE LA REPÚBLICA   (Uruguay)

^b INSTITUTO DE FÍSICA   (Uruguay)

Author keywords

[No Author keywords available]

Indexed keywords

COMPETITION (ECOLOGY); EVOLUTIONARY THEORY; FACILITATION; FITNESS; MICROBIAL COMMUNITY; MUTATION; POPULATION DISTRIBUTION; SPECIES DIVERSITY; THEORETICAL STUDY; VIRUS;

VIRUS RNA;

ARTICLE; BIOLOGICAL MODEL; GENETICS; MOLECULAR EVOLUTION; MUTATION; POPULATION GENETICS; VIRUS; VIRUS GENOME;

EVOLUTION, MOLECULAR; GENETICS, POPULATION; GENOME, VIRAL; MODELS, GENETIC; MUTATION; RNA, VIRAL; VIRUSES;

EID: 77951948827     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-10-137     Document Type: Article

References (24)

1. The Hypercycle: a principle of natural self-organization. M Eigen P Schuster, Springer-Verlag New York 1979
2. Basic concepts in RNA virus evolution. E Domingo C Escarmis N Sevilla A Moya SF Elena J Quer IS Novella J Holland, FASEB Jour 1996 10 859 864
3. Sequence space and quasispecies distribution. M Eigen CK Biebricher, RNA Genetics CRC Press. Inc., Boca Raton, Florida, Domingo E, Holland J, Ahiquist P, 1998 3 211 245
4. The red queen reigns in the kingdom of RNA viruses. D Clarke E Duarte S Elena A Moya E Domingo J Holland, PNAS 1994 91 4821 4824 10.1073/pnas.91.11.4821 8197141
5. RM May, Stability and complexity in model ecosystems Princeton; Princeton University Press 1974
6. Preextinction viral RNA can interfere with infectivity. C Gonzlez-Lápez A Arias N Pariente G Gomez-Mariano E Domingo, J Virol 2004 78 7 3319 3324 10.1128/JVI.78.7.3319-3324.2004 15016853
7. Sex and the evolution of intrahost competition in RNA virus 6. PE Turner L Chao, Genetics 1998 150 523 532 9755186
8. Escape from prisoner's dilemma in RNA phage 6. PE Turner L Chao, Am Nat 2003 161 3 497 505 10.1086/367880 12699226
9. Prisoner's dilemma in an RNA virus. PE Turner, Nature 1999 398 441 443 10.1038/18913 10201376
10. Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population. M Vignuzzi JK Stone J Arnold C Cameron R Andino, Nature 2006 439 344 348 10.1038/nature04388 16327776
11. Increased fidelity reduces poliovirus fitness and virulence under selective pressure in mice. J Pfeiffer K Kierkegaard, PLoS Pathog 2005 1 2 11 102-110 10.1371/journal.ppat.0010011 16220146
12. Evolutionary Dynamics: Exploring the Equations of Life. MA Nowak, Cambridge, USA: Harvard University Press 2006
13. Unifying evolutionary dynamics. KM Page MA Nowak, J Theor Biol 2002 219 93 98 12392978
14. Evolution in Changing Environments. R Levins, Princeton: Princeton University Press 1968
15. The limiting similarity, converge, and divergence of coexisting species. RH MacArthur R Levins, Am Nat 1967 101 377 385 10.1086/282505
16. Self-organized similarity, the evolutionary emergence of groups of similar species. M Scheffer E van Nes, PNAS USA 2006 103 6230 6235 10.1073/pnas.0508024103 16585519
17. The paradox of the clumps mathematically explained. H Fort M Scheffer E van Nes, Theor Ecol 2009 2 3 171 176 10.1007/s12080-009-0040-x
18. Response of Foot-and-Mouth disease virus to increased mutagenesis: influence of viral load and fitness in loss of infectivity. S Sierra M Dvila P Lowenstein E Domingo, J Virol 2000 74 18 8316 8323 10.1128/JVI.74.18.8316-8323. 2000 10954530
19. Insights into RNA virus mutant spectrum and lethal mutagenesis events: replicative interference and complementation by multiple point mutants. C Perales R Mateo M Mateu E Domingo, J Mol Biol 2007 369 985 1000 10.1016/j.jmb.2007.03.074 17481660
20. Mutation rates among RNA viruses. JW Drake JJ Holland, PNAS 1999 96 24 13910 13913 10.1073/pnas.96.24.13910 10570172
21. Suppression of viral infectivity through lethal defection. A Grande-Pérez E Lzaro P Lowenstein E Domingo S Manrubia, PNAS 2005 102 4448 4452 10.1073/pnas.0408871102 15767582
22. Evolutionary Games and Population Dynamics. M Hofbauer K Sigmund, Cambridge, UK: Cambridge University Press 1998
23. Stable polymorphisms in a selection model with mutation. KP Hadeler, SIAM J Appl Math 1981 41 1 7 10.1137/0141001
24. Evolution of universal grammar. MA Nowak N Komarova P Niyogi, Science 2001 291 114 118 10.1126/science.291.5501.114 11141560