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Volumn 10, Issue 8, 1996, Pages 859-864

Basic concepts in RNA virus evolution

Author keywords

genetic bottleneck; population equilibrium; quasispecies competitive exclusion principle; Red Queen hypothesis; RNA genome replication

Indexed keywords

VIRUS RNA;

EID: 0029949286     PISSN: 08926638     EISSN: None     Source Type: Journal    
DOI: 10.1096/fasebj.10.8.8666162     Document Type: Review
Times cited : (382)

References (48)
  • 1
    • 0025744655 scopus 로고
    • New viruses and new diseases: Mutation, evolution and ecology
    • Kilbourne E. D. (1991) New viruses and new diseases: mutation, evolution and ecology. Curr. Opin. Immunol. 3, 518-524
    • (1991) Curr. Opin. Immunol. , vol.3 , pp. 518-524
    • Kilbourne, E.D.1
  • 3
    • 0002130413 scopus 로고
    • Mutation rates and rapid evolution of RNA viruses
    • (Morse, S. S., ed) Raven Press, New York
    • Domingo, E., and Holland, J.J. (1994) Mutation rates and rapid evolution of RNA viruses. In Evolutionary Biology of Viruses (Morse, S. S., ed) pp. 161-184, Raven Press, New York
    • (1994) Evolutionary Biology of Viruses , pp. 161-184
    • Domingo, E.1    Holland, J.J.2
  • 4
    • 0027221640 scopus 로고
    • Rates of spontaneous mutations among RNA viruses
    • Drake, J. W. (1993) Rates of spontaneous mutations among RNA viruses. Proc. Natl. Acad. Sci. USA 90, 4171-1175
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 4171-11175
    • Drake, J.W.1
  • 5
    • 0029075130 scopus 로고
    • Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase
    • Manaky, L. M., and Temin, H. M. (1995) Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase. J. Virol. 69, 5087-5094
    • (1995) J. Virol. , vol.69 , pp. 5087-5094
    • Manaky, L.M.1    Temin, H.M.2
  • 6
    • 0025886466 scopus 로고
    • A constant rate of spontaneous mutation in DNA-based microbes
    • Drake, J. W. (1991) A constant rate of spontaneous mutation in DNA-based microbes. Proc. Natl. Acad. Sci. USA 88, 7160-7164
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 7160-7164
    • Drake, J.W.1
  • 7
    • 0027848722 scopus 로고
    • Multi-stage proofreading in DNA replication
    • Beckman, R. A., and Loeb, L. A. (1993) Multi-stage proofreading in DNA replication. Q. Rev. Biophys. 26, 255-331
    • (1993) Q. Rev. Biophys. , vol.26 , pp. 255-331
    • Beckman, R.A.1    Loeb, L.A.2
  • 10
    • 0025977774 scopus 로고
    • Selection, recombination and G/A hypermulation of human immunodeficiency virus type 1 genomes
    • Vartanian, J.-P., Meyerhans, A., Asjö, B., and Wain-Hobson, S. (1991) Selection, recombination and G/A hypermulation of human immunodeficiency virus type 1 genomes. J. Virol. 65, 1779-1788
    • (1991) J. Virol. , vol.65 , pp. 1779-1788
    • Vartanian, J.-P.1    Meyerhans, A.2    Asjö, B.3    Wain-Hobson, S.4
  • 11
    • 0029007870 scopus 로고
    • DNA mismatch binding effects, DNA damage tolerance, and mutator phenotypes in human colorectal carcinoma cell lines
    • Branch, P., Hampson, R., and Karran, P. (1995) DNA mismatch binding effects, DNA damage tolerance, and mutator phenotypes in human colorectal carcinoma cell lines. Cancer Res. 55, 2305-2309
    • (1995) Cancer Res. , vol.55 , pp. 2305-2309
    • Branch, P.1    Hampson, R.2    Karran, P.3
  • 12
    • 8944228361 scopus 로고
    • Biased hypermutation and other genetic changes in defective measles viruses in human brain infections
    • Cattaneo, R., Schmid, A., Eschle, D., Baczko, K., ter Meulen, V., and Billeter, M. A. (1988) Biased hypermutation and other genetic changes in defective measles viruses in human brain infections. Cell 56, 759-764
    • (1988) Cell , vol.56 , pp. 759-764
    • Cattaneo, R.1    Schmid, A.2    Eschle, D.3    Baczko, K.4    Ter Meulen, V.5    Billeter, M.A.6
  • 13
    • 15544373334 scopus 로고
    • Sequence space and quasispecies distribution
    • (Domingo, E., Holland, J. J., and Ahlquist, P., eds) CRC Press, Inc., Boca Raton, Florida
    • Eigen, M., and Biebricher, C.K. (1988) Sequence space and quasispecies distribution. In RNA Genetics (Domingo, E., Holland, J. J., and Ahlquist, P., eds) Vol. 3, pp. 211-245, CRC Press, Inc., Boca Raton, Florida
    • (1988) RNA Genetics , vol.3 , pp. 211-245
    • Eigen, M.1    Biebricher, C.K.2
  • 14
    • 0027475412 scopus 로고
    • E. Coli DNA polymerase I as a reverse transcriptase
    • Ricchetti, M., and Buc, H. (1993) E. Coli DNA polymerase I as a reverse transcriptase. EMBO J. 12, 387-396
    • (1993) EMBO J. , vol.12 , pp. 387-396
    • Ricchetti, M.1    Buc, H.2
  • 15
    • 0001420372 scopus 로고
    • Is antigenic variation of HIV important for AIDS and what might be expected in the future?
    • (Morse, S. S., ed) Raven Press, New York
    • Wain-Hobson, S. (1994) Is antigenic variation of HIV important for AIDS and what might be expected in the future? In The Evolutionary Biology of Viruses (Morse, S. S., ed) pp. 185-209, Raven Press, New York
    • (1994) The Evolutionary Biology of Viruses , pp. 185-209
    • Wain-Hobson, S.1
  • 16
    • 0027787422 scopus 로고
    • Plant viruses: Master explorers of evolutionary space
    • Keese, P., and Gibbs, A. (1993) Plant viruses: master explorers of evolutionary space. Curr. Opin. Genet. Dev. 3, 873-877
    • (1993) Curr. Opin. Genet. Dev. , vol.3 , pp. 873-877
    • Keese, P.1    Gibbs, A.2
  • 17
    • 0026786637 scopus 로고
    • Nonhomogeneous distribution of human immunodeficiency virus type 1 proviruses in the spleen
    • Delassus, S., Cheynier, R., and Wain-Hobson, S. (1992) Nonhomogeneous distribution of human immunodeficiency virus type 1 proviruses in the spleen. J. Virol. 66, 5642-5645
    • (1992) J. Virol. , vol.66 , pp. 5642-5645
    • Delassus, S.1    Cheynier, R.2    Wain-Hobson, S.3
  • 20
    • 0026491806 scopus 로고
    • Complications of RNA heterogeneity for the engineering of virus vaccines and antiviral agents
    • (Setlow, J. K., ed) Plenum Press, New York
    • Domingo, E., and Holland, J. J. (1992) Complications of RNA heterogeneity for the engineering of virus vaccines and antiviral agents. In Genetic Engineering, Principles and Methods, Vol. 14 (Setlow, J. K., ed) Plenum Press, New York pp. 13-32
    • (1992) Genetic Engineering, Principles and Methods , vol.14 , pp. 13-32
    • Domingo, E.1    Holland, J.J.2
  • 21
    • 0017806301 scopus 로고
    • Nucleotide sequence heterogeneity of an RNA phage population
    • Domingo, E., Sabo, D. L., Taniguchi, T., and Weissmann, C. (1978) Nucleotide sequence heterogeneity of an RNA phage population. Cell 13, 735-744
    • (1978) Cell , vol.13 , pp. 735-744
    • Domingo, E.1    Sabo, D.L.2    Taniguchi, T.3    Weissmann, C.4
  • 22
    • 0024584249 scopus 로고
    • Extreme heterogeneity in populations of vesicular stomatitis virus
    • Steinhauer, D. A., de la Torre, J. C., Meier, E., and Holland, J.J. (1989) Extreme heterogeneity in populations of vesicular stomatitis virus. J. Virol. 63, 2072-2080
    • (1989) J. Virol. , vol.63 , pp. 2072-2080
    • Steinhauer, D.A.1    De La Torre, J.C.2    Meier, E.3    Holland, J.J.4
  • 24
    • 0025244957 scopus 로고
    • Fitness of RNA virus decreased by Muller's ratchet
    • Chao, L. (1990) Fitness of RNA virus decreased by Muller's ratchet. Nature (London) 348, 454-455
    • (1990) Nature (London) , vol.348 , pp. 454-455
    • Chao, L.1
  • 25
  • 26
    • 50549201557 scopus 로고
    • The relation of recombination to mutational advance
    • Muller, H. J. (1964) The relation of recombination to mutational advance. Mutat. Res. 1, 2-9
    • (1964) Mutat. Res. , vol.1 , pp. 2-9
    • Muller, H.J.1
  • 28
    • 0028162824 scopus 로고
    • Risk of population extinction from fixation of new deleterious mutations
    • Lande, R. (1994) Risk of population extinction from fixation of new deleterious mutations. Evolution 48, 1460-1469
    • (1994) Evolution , vol.48 , pp. 1460-1469
    • Lande, R.1
  • 29
    • 0028838604 scopus 로고
    • Extreme fitness differences in mammalian and insect hosts after persistent replication of vesicular stomatitis virus in sandfly cells
    • Novella, I. S., Clarke, D. K., Quer, J., Duarte, E. A., Weaver, S. C., Elena, S. F., Moya, A., Domingo, E., and Holland, J. J. (1995a) Extreme fitness differences in mammalian and insect hosts after persistent replication of vesicular stomatitis virus in sandfly cells. J. Virol. 69, 6805-6809
    • (1995) J. Virol. , vol.69 , pp. 6805-6809
    • Novella, I.S.1    Clarke, D.K.2    Quer, J.3    Duarte, E.A.4    Weaver, S.C.5    Elena, S.F.6    Moya, A.7    Domingo, E.8    Holland, J.J.9
  • 32
    • 0028922116 scopus 로고
    • Size of genetic bottlenecks leading to virus fitness loss is determined by mean initial population fitness
    • Novella, I. S., Elena, S. F., Moya, A., Domingo, E., and Holland, J. J. (1995) Size of genetic bottlenecks leading to virus fitness loss is determined by mean initial population fitness. J. Virol. 69, 2869-2872
    • (1995) J. Virol. , vol.69 , pp. 2869-2872
    • Novella, I.S.1    Elena, S.F.2    Moya, A.3    Domingo, E.4    Holland, J.J.5
  • 33
    • 0001771498 scopus 로고
    • Evolution in Mendelian populations
    • Wright, S. (1931) Evolution in Mendelian populations. Genetics 16, 97-159
    • (1931) Genetics , vol.16 , pp. 97-159
    • Wright, S.1
  • 35
    • 0025886357 scopus 로고
    • Fitness alteration of foor-and-mouth disease virus mutants: Measurement of adaptability of viral quasispecies
    • Martínez, M. A., Canillo, C., González-Candelas, F., Moya, A., Domingo, E., and Sobrino, F. (1991). Fitness alteration of foor-and-mouth disease virus mutants: measurement of adaptability of viral quasispecies. J. Virol. 65, 3954-3957
    • (1991) J. Virol. , vol.65 , pp. 3954-3957
    • Martínez, M.A.1    Canillo, C.2    González-Candelas, F.3    Moya, A.4    Domingo, E.5    Sobrino, F.6
  • 36
    • 0027274770 scopus 로고
    • Distinct repertoire of antigenic variants of foot-and-mouth disease virus in the presence or absence of immune selection
    • Borrego, B., Novella, I. S., Giralt, E., Andreu, D., and Domingo, E. (1993). Distinct repertoire of antigenic variants of foot-and-mouth disease virus in the presence or absence of immune selection. J. Virol. 67, 6071-6079
    • (1993) J. Virol. , vol.67 , pp. 6071-6079
    • Borrego, B.1    Novella, I.S.2    Giralt, E.3    Andreu, D.4    Domingo, E.5
  • 37
    • 0027957786 scopus 로고
    • Antigenic heterogeneity of a foot-and-mouth disease virus serotype in the field is mediated by very limited sequence variation at several antigenic sites
    • Mateu, M. G., Hernández, J., Martínez, M. A., Feigelstock, D., Lea, S., Pérez, J. J., Giralt, E., Stuart, D., Palma, E. L., and Domingo, E. (1994). Antigenic heterogeneity of a foot-and-mouth disease virus serotype in the field is mediated by very limited sequence variation at several antigenic sites. J. Virol. 68, 1407-1417
    • (1994) J. Virol. , vol.68 , pp. 1407-1417
    • Mateu, M.G.1    Hernández, J.2    Martínez, M.A.3    Feigelstock, D.4    Lea, S.5    Pérez, J.J.6    Giralt, E.7    Stuart, D.8    Palma, E.L.9    Domingo, E.10
  • 40
    • 0001579230 scopus 로고
    • Competition between species: Frequency dependence
    • Ayala, F. J. (1971) Competition between species: Frequency dependence. Science 171, 820-824
    • (1971) Science , vol.171 , pp. 820-824
    • Ayala, F.J.1
  • 41
    • 0002027029 scopus 로고
    • A new evolutionary law
    • van Valen, L. (1973) A new evolutionary law. Evol. Theory 1, 1-30
    • (1973) Evol. Theory , vol.1 , pp. 1-30
    • Van Valen, L.1
  • 42
    • 0001740358 scopus 로고
    • Population genetics of viruses: An introduction
    • (Gibbs, A., Calisher, C., and García-Arenal, F., eds) Cambridge University Press, Cambridge
    • Moya, A., and García-Arenal, F. (1995) Population genetics of viruses: an introduction. In Molecular Evolution of the Viruses (Gibbs, A., Calisher, C., and García-Arenal, F., eds) pp. 213-223, Cambridge University Press, Cambridge
    • (1995) Molecular Evolution of the Viruses , pp. 213-223
    • Moya, A.1    García-Arenal, F.2
  • 44
    • 0025284804 scopus 로고
    • Mutation frequencies at defined single codon sites in vesicular stomatitis virus and poliovirus can be increased only slightly by chemical mutagenesis
    • Holland, J. J., Domingo, E., de la Torre, J. C., and Steinhauer, D. A. (1990) Mutation frequencies at defined single codon sites in vesicular stomatitis virus and poliovirus can be increased only slightly by chemical mutagenesis. J. Virol. 64, 3960-3962
    • (1990) J. Virol. , vol.64 , pp. 3960-3962
    • Holland, J.J.1    Domingo, E.2    De La Torre, J.C.3    Steinhauer, D.A.4
  • 45
    • 0026528541 scopus 로고
    • 5-Azacytidine and RNA secondary structure increase the retrovirus mutation rate
    • Pathak, V. K., and Temin, H. M. (1992) 5-Azacytidine and RNA secondary structure increase the retrovirus mutation rate. J. Virol. 66, 3093-3100
    • (1992) J. Virol. , vol.66 , pp. 3093-3100
    • Pathak, V.K.1    Temin, H.M.2


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