-
1
-
-
44849121863
-
Direct analysis of tfdA gene expression by indigenous bacteria in phenoxy acid amended agricultural soil
-
Baelum J, Nicolaisen MH, Holben WE, Strobel BW, Sorensen J, Jacobsen CS (2008). Direct analysis of tfdA gene expression by indigenous bacteria in phenoxy acid amended agricultural soil. ISME J. 2: 677-687.
-
(2008)
ISME J
, vol.2
, pp. 677-687
-
-
Baelum, J.1
Nicolaisen, M.H.2
Holben, W.E.3
Strobel, B.W.4
Sorensen, J.5
Jacobsen, C.S.6
-
2
-
-
0000274726
-
Direct extraction of DNA from soil for amplification of 16S rRNA gene sequences by polymerase chain reaction
-
Cho JC, Lee DH, Cho YC, Cho JC, Kim SJ (1996). Direct extraction of DNA from soil for amplification of 16S rRNA gene sequences by polymerase chain reaction. J. Microbiol. 34: 229-235.
-
(1996)
J. Microbiol
, vol.34
, pp. 229-235
-
-
Cho, J.C.1
Lee, D.H.2
Cho, Y.C.3
Cho, J.C.4
Kim, S.J.5
-
3
-
-
64849088703
-
Molecular detection of nifH gene-containing Paenibacillus in the rhizosphere of sorghum (Sorghum bicolor) sown in cerrado soil
-
Coelho MRR, Carneiro NP, Marriel IE, Seldin L (2009). Molecular detection of nifH gene-containing Paenibacillus in the rhizosphere of sorghum (Sorghum bicolor) sown in cerrado soil. Lett. Appl. Microbiol. 48: 611-617.
-
(2009)
Lett. Appl. Microbiol
, vol.48
, pp. 611-617
-
-
Coelho, M.R.R.1
Carneiro, N.P.2
Marriel, I.E.3
Seldin, L.4
-
4
-
-
58149335099
-
Tracking the influence of long-term chromium pollution on soil bacterial community structures by comparative analyses of 16S rRNA gene phylotypes
-
Desai C, Parikh RY, Vaishnav T, Shouche YS, Madamwar D (2009). Tracking the influence of long-term chromium pollution on soil bacterial community structures by comparative analyses of 16S rRNA gene phylotypes. Res. Microbiol. 160: 1-9.
-
(2009)
Res. Microbiol
, vol.160
, pp. 1-9
-
-
Desai, C.1
Parikh, R.Y.2
Vaishnav, T.3
Shouche, Y.S.4
Madamwar, D.5
-
5
-
-
33745132352
-
Removal of humic substances from soil DNA using aluminium sulfate
-
Dong DX, Yan A, Liu HM, Zhang XH, Xu YQ (2006). Removal of humic substances from soil DNA using aluminium sulfate. J. Microbiol. Methods. 66: 217-222.
-
(2006)
J. Microbiol. Methods
, vol.66
, pp. 217-222
-
-
Dong, D.X.1
Yan, A.2
Liu, H.M.3
Zhang, X.H.4
Xu, Y.Q.5
-
6
-
-
21344437853
-
A simple method of DNA extraction from soil for detection of composite transgenic plants by PCR
-
Ernst D, Kiefer E, Drouet A, Sandermann H (1996). A simple method of DNA extraction from soil for detection of composite transgenic plants by PCR. Plant Mol. Biol. Rep. 14: 143-148.
-
(1996)
Plant Mol. Biol. Rep
, vol.14
, pp. 143-148
-
-
Ernst, D.1
Kiefer, E.2
Drouet, A.3
Sandermann, H.4
-
7
-
-
0032710940
-
Quantification of bias related to the extraction of DNA directly from soils
-
Frostegard A, Courtois S, Ramisse V, Clerc S, Bernillon D, Le Gall F, Jeannin P, Nesme X, Simonet P (1999). Quantification of bias related to the extraction of DNA directly from soils. Appl. Environ. Microb. 65: 5409-5420.
-
(1999)
Appl. Environ. Microb
, vol.65
, pp. 5409-5420
-
-
Frostegard, A.1
Courtois, S.2
Ramisse, V.3
Clerc, S.4
Bernillon, D.5
Le Gall, F.6
Jeannin, P.7
Nesme, X.8
Simonet, P.9
-
8
-
-
0027580147
-
ITS primers with enhanced specificity for Basidiomycetes-application to the identification of mycorrhizae and rusts
-
Gardes M, Bruns TD (1993). ITS primers with enhanced specificity for Basidiomycetes-application to the identification of mycorrhizae and rusts. Mol. Ecol. 2: 113-118.
-
(1993)
Mol. Ecol
, vol.2
, pp. 113-118
-
-
Gardes, M.1
Bruns, T.D.2
-
9
-
-
0023866522
-
DNA probe method for the detection of specific microorganisms in the soil bacterial community
-
Holben WE, Jansson JK, Chelm BK, Tiedje JM (1988). DNA probe method for the detection of specific microorganisms in the soil bacterial community. Appl. Environ. Microb. 54: 703-711.
-
(1988)
Appl. Environ. Microb
, vol.54
, pp. 703-711
-
-
Holben, W.E.1
Jansson, J.K.2
Chelm, B.K.3
Tiedje, J.M.4
-
10
-
-
0030782656
-
A simple, efficient method for the separation of humic substances and DNA from environmental samples
-
Jackson CR, Harper JP, Willoughby D, Roden EE, Churchill PF (1997). A simple, efficient method for the separation of humic substances and DNA from environmental samples. Appl. Environ. Microb. 63: 4993-4995.
-
(1997)
Appl. Environ. Microb
, vol.63
, pp. 4993-4995
-
-
Jackson, C.R.1
Harper, J.P.2
Willoughby, D.3
Roden, E.E.4
Churchill, P.F.5
-
11
-
-
58349089217
-
Use of the frc gene as a molecular marker to characterize oxalate-oxidizing bacterial abundance and diversity structure in soil
-
Khammar N, Martin G, Ferro K, Job D, Aragno M, Verrecchia E (2009). Use of the frc gene as a molecular marker to characterize oxalate-oxidizing bacterial abundance and diversity structure in soil. J. Microbiol. Method. 76: 120-127.
-
(2009)
J. Microbiol. Method
, vol.76
, pp. 120-127
-
-
Khammar, N.1
Martin, G.2
Ferro, K.3
Job, D.4
Aragno, M.5
Verrecchia, E.6
-
12
-
-
0032718452
-
Comparison of different methods for the isolation and purification of total community DNA from soil
-
Krsek M, Wellington EMH (1999). Comparison of different methods for the isolation and purification of total community DNA from soil. J. Microbiol. Method. 39: 1-16.
-
(1999)
J. Microbiol. Method
, vol.39
, pp. 1-16
-
-
Krsek, M.1
Wellington, E.M.H.2
-
13
-
-
33845603602
-
Comparative analysis of environmental DNA extraction and purification methods from different humic acid-rich soils
-
Lakay FM, Botha A, Prior BA (2007). Comparative analysis of environmental DNA extraction and purification methods from different humic acid-rich soils. J. Appl. Microb. 102: 265-273.
-
(2007)
J. Appl. Microb
, vol.102
, pp. 265-273
-
-
Lakay, F.M.1
Botha, A.2
Prior, B.A.3
-
15
-
-
33846787135
-
Ectomycorrhizal Fungi in Jiangsu Province, China
-
Lian B, Dong YR, Hou WG, Tong LH, Yuan S (2007). Ectomycorrhizal Fungi in Jiangsu Province, China. Pedosphere. 17(1):30-35.
-
(2007)
Pedosphere
, vol.17
, Issue.1
, pp. 30-35
-
-
Lian, B.1
Dong, Y.R.2
Hou, W.G.3
Tong, L.H.4
Yuan, S.5
-
16
-
-
44249127260
-
Recovery, purification, and cloning of high-molecular-weight DNA from soil microorganisms
-
Liles MR, Williamson LL, Rodbumrer J, Torsvik V, Goodman RM, Handelsman J (2008). Recovery, purification, and cloning of high-molecular-weight DNA from soil microorganisms. Appl. Environ. Microb. 74: 3302-3305.
-
(2008)
Appl. Environ. Microb
, vol.74
, pp. 3302-3305
-
-
Liles, M.R.1
Williamson, L.L.2
Rodbumrer, J.3
Torsvik, V.4
Goodman, R.M.5
Handelsman, J.6
-
17
-
-
0036585476
-
Soil organic matter changes of turnover ecosystems traced by stable carbon isotopes. Chinese
-
Liu QM, Wang SJ, Piao HC, Ouyang ZY (2002). Soil organic matter changes of turnover ecosystems traced by stable carbon isotopes. Chinese J. Environ. Sci. 23: 75-78.
-
(2002)
J. Environ. Sci
, vol.23
, pp. 75-78
-
-
Liu, Q.M.1
Wang, S.J.2
Piao, H.C.3
Ouyang, Z.Y.4
-
18
-
-
23044485088
-
Fungal-specific PCR primers developed for analysis of the ITS region of environmental DNA extracts
-
Martin KJ, Rygiewicz PT (2005). Fungal-specific PCR primers developed for analysis of the ITS region of environmental DNA extracts. BMC Microbiol. 5: 710-715.
-
(2005)
BMC Microbiol
, vol.5
, pp. 710-715
-
-
Martin, K.J.1
Rygiewicz, P.T.2
-
19
-
-
0035129246
-
Evaluation of gel filtration resins for the removal of PCR-inhibitory substances from soils and sediments
-
Miller DN (2001). Evaluation of gel filtration resins for the removal of PCR-inhibitory substances from soils and sediments. J. Microbiol. Method. 44: 49-58.
-
(2001)
J. Microbiol. Method
, vol.44
, pp. 49-58
-
-
Miller, D.N.1
-
20
-
-
0032703237
-
Evaluation and optimization of DNA extraction and purification procedures for soil and sediment samples
-
Miller DN, Bryant JE, Madsen EL, Ghiorse WC (1999). Evaluation and optimization of DNA extraction and purification procedures for soil and sediment samples. Appl. Environ. Microb. 65: 4715-4724.
-
(1999)
Appl. Environ. Microb
, vol.65
, pp. 4715-4724
-
-
Miller, D.N.1
Bryant, J.E.2
Madsen, E.L.3
Ghiorse, W.C.4
-
21
-
-
0034937878
-
A microwave-based method for nucleic acid isolation from environmental samples
-
Orsini M, Romano-Spica V (2001). A microwave-based method for nucleic acid isolation from environmental samples. Lett. Appl. Microbiol. 33: 17-20.
-
(2001)
Lett. Appl. Microbiol
, vol.33
, pp. 17-20
-
-
Orsini, M.1
Romano-Spica, V.2
-
22
-
-
0027984683
-
An effective method to extract DNA from environmental-samples for polymerase chain-reaction amplification and DNA fingerprint analysis
-
Porteous LA, Armstrong JL, Seidler RJ, Watrud LS (1994). An effective method to extract DNA from environmental-samples for polymerase chain-reaction amplification and DNA fingerprint analysis. Curr. Microbiol. 29: 301-307.
-
(1994)
Curr. Microbiol
, vol.29
, pp. 301-307
-
-
Porteous, L.A.1
Armstrong, J.L.2
Seidler, R.J.3
Watrud, L.S.4
-
24
-
-
50049091986
-
Evaluation of DNA damage in the root cells of Allium cepa seeds growing in soil of high background radiation areas of Ramsar - Iran
-
Saghirzadeh M, Gharaati MR, Mohammadi S, Ghiassi-Nejad M (2008). Evaluation of DNA damage in the root cells of Allium cepa seeds growing in soil of high background radiation areas of Ramsar - Iran. J. Environ. Radioact. 99: 1698-1702.
-
(2008)
J. Environ. Radioact
, vol.99
, pp. 1698-1702
-
-
Saghirzadeh, M.1
Gharaati, M.R.2
Mohammadi, S.3
Ghiassi-Nejad, M.4
-
25
-
-
43049150072
-
Innovative methods for soil DNA purification tested in soils with widely differing characteristics
-
Sagova-Mareckova M, Cermak L, Novotna J, Plhackova K, Forstova J, Kopecky J (2008). Innovative methods for soil DNA purification tested in soils with widely differing characteristics. Appl. Environ. Microb. 74: 2902-2907.
-
(2008)
Appl. Environ. Microb
, vol.74
, pp. 2902-2907
-
-
Sagova-Mareckova, M.1
Cermak, L.2
Novotna, J.3
Plhackova, K.4
Forstova, J.5
Kopecky, J.6
-
27
-
-
0027458468
-
Rapid DNA extraction protocol from soil for polymerase chain reaction-mediated amplification
-
Smalla K, Cresswell N, Mendoncahagler LC, Wolters A, Vanelsas JD (1993). Rapid DNA extraction protocol from soil for polymerase chain reaction-mediated amplification. J. Appl. Bacteriol. 74: 78-85.
-
(1993)
J. Appl. Bacteriol
, vol.74
, pp. 78-85
-
-
Smalla, K.1
Cresswell, N.2
Mendoncahagler, L.C.3
Wolters, A.4
Vanelsas, J.D.5
-
28
-
-
0030067991
-
Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
-
Suzuki MT, Giovannoni SJ (1996). Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl. Environ. Microb. 62: 625-630.
-
(1996)
Appl. Environ. Microb
, vol.62
, pp. 625-630
-
-
Suzuki, M.T.1
Giovannoni, S.J.2
-
29
-
-
0000558204
-
Methods of soil analysis: Part 3. Chemical methods
-
in Dane JH, Clarke-Topp G (ed.), Soil Science Society of America and American Society of Agronomy, Madison, USA
-
Swift RS, Sparks DL (1996). Methods of soil analysis: Part 3. Chemical methods, p. 1011-1069. in Dane JH, Clarke-Topp G (ed.) Method of Soil Science Analysis-1996. Soil Science Society of America and American Society of Agronomy, Madison, USA.
-
(1996)
Method of Soil Science Analysis-1996
, pp. 1011-1069
-
-
Swift, R.S.1
Sparks, D.L.2
-
30
-
-
65449166402
-
Analysis of nifH gene diversity in red soil amended with manure in Jiangxi, South China
-
Teng QH, Sun B, Fu XR, Li SP, Cui ZL, Cao H (2009). Analysis of nifH gene diversity in red soil amended with manure in Jiangxi, South China J. Microbiol. 47: 135-141.
-
(2009)
J. Microbiol
, vol.47
, pp. 135-141
-
-
Teng, Q.H.1
Sun, B.2
Fu, X.R.3
Li, S.P.4
Cui, Z.L.5
Cao, H.6
-
31
-
-
43649083523
-
Importance of DNA quality in comparative soil microbial community structure analyses
-
Thakuria D, Schmidt O, Mac-Siurtain M, Egan D, Doohan FM (2008). Importance of DNA quality in comparative soil microbial community structure analyses. Soil. Biol. Biochem. 40: 1390-1403.
-
(2008)
Soil. Biol. Biochem
, vol.40
, pp. 1390-1403
-
-
Thakuria, D.1
Schmidt, O.2
Mac-Siurtain, M.3
Egan, D.4
Doohan, F.M.5
-
32
-
-
67549114449
-
Soil bacterial community composition across different topographic sites characterized by 16S rRNA gene clones in the Fushan forest of Taiwan
-
Tsai SH, Selvam A, Chang YP, Yang SS (2009). Soil bacterial community composition across different topographic sites characterized by 16S rRNA gene clones in the Fushan forest of Taiwan. Bot. Stud. 50: 57-68.
-
(2009)
Bot. Stud
, vol.50
, pp. 57-68
-
-
Tsai, S.H.1
Selvam, A.2
Chang, Y.P.3
Yang, S.S.4
-
33
-
-
0026708461
-
Rapid method for separation of bacterial-DNA from humic substances in sediments for polymerase chain-reaction
-
Tsai YL, Olson BH (1992). Rapid method for separation of bacterial-DNA from humic substances in sediments for polymerase chain-reaction. Appl. Environ. Microb. 58: 2292-2295.
-
(1992)
Appl. Environ. Microb
, vol.58
, pp. 2292-2295
-
-
Tsai, Y.L.1
Olson, B.H.2
-
34
-
-
0000432452
-
Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
-
in Innis MA, Gelfand DH, Sninsky JJ, White TJ (ed.), Academic Press, New York, USA
-
White TJ, Bruns T, Lee S, Taylor J (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics, pp. 315-322, in Innis MA, Gelfand DH, Sninsky JJ, White TJ (ed.), PCR protocols: a guide to methods and applications. Academic Press, New York, USA.
-
(1990)
PCR Protocols: A Guide to Methods and Applications
, pp. 315-322
-
-
White, T.J.1
Bruns, T.2
Lee, S.3
Taylor, J.4
-
35
-
-
0030748867
-
Inhibition and facilitation of nucleic acid amplification
-
Wilson IG (1997). Inhibition and facilitation of nucleic acid amplification. Appl. Environ. Microb. 63: 3741-3751.
-
(1997)
Appl. Environ. Microb
, vol.63
, pp. 3741-3751
-
-
Wilson, I.G.1
-
36
-
-
0033428249
-
Structure of molecular weight fractions of bayer humic substances. 1. Low-temperature products
-
Wilson MA, Ellis AV, Lee GSH, Rose HR, Lu X, Young BR (1999). Structure of molecular weight fractions of bayer humic substances. 1. Low-temperature products. Ind. Eng. Chem. Res. 38: 4663-4674.
-
(1999)
Ind. Eng. Chem. Res
, vol.38
, pp. 4663-4674
-
-
Wilson, M.A.1
Ellis, A.V.2
Lee, G.S.H.3
Rose, H.R.4
Lu, X.5
Young, B.R.6
-
37
-
-
65349191182
-
Analysis of the diversity of diazotrophic bacteria in peat soil by cloning of the nifH gene
-
Zadorina EV, Slobodova NV, Boulygina ES, Kolganova TV, Kravchenko IK, Kuznetsov BB (2009). Analysis of the diversity of diazotrophic bacteria in peat soil by cloning of the nifH gene. Microbiology, 78: 218-226.
-
(2009)
Microbiology
, vol.78
, pp. 218-226
-
-
Zadorina, E.V.1
Slobodova, N.V.2
Boulygina, E.S.3
Kolganova, T.V.4
Kravchenko, I.K.5
Kuznetsov, B.B.6
-
38
-
-
56749163378
-
Assessing bacterial diversity in soil
-
Zhang L, Xu ZH (2008). Assessing bacterial diversity in soil. J. Soils Sediments. 8: 379-388.
-
(2008)
J. Soils Sediments
, vol.8
, pp. 379-388
-
-
Zhang, L.1
Xu, Z.H.2
-
40
-
-
77951726539
-
Type of forming peat ore and character of peat in Dunhua, Jilin province (in Chinese)
-
Zhao HY, Wang SZ, He CG (2001). Type of forming peat ore and character of peat in Dunhua, Jilin province (in Chinese). J. Northwest Normal. Univ. Nat. Sci. 33: 93-96.
-
(2001)
J. Northwest Normal. Univ. Nat. Sci
, vol.33
, pp. 93-96
-
-
Zhao, H.Y.1
Wang, S.Z.2
He, C.G.3
-
41
-
-
69549114964
-
Characterization of insecticidal crystal protein cry gene of Bacillus thuringiensis from soil of Sichuan Basin, China and cloning of novel haplotypes cry gene
-
Zhu J, Tan FR, Tang J, Li YY, Zheng AP, Li P (2009). Characterization of insecticidal crystal protein cry gene of Bacillus thuringiensis from soil of Sichuan Basin, China and cloning of novel haplotypes cry gene. Ann. Microbiol. 59: 1-8.
-
(2009)
Ann. Microbiol
, vol.59
, pp. 1-8
-
-
Zhu, J.1
Tan, F.R.2
Tang, J.3
Li, Y.Y.4
Zheng, A.P.5
Li, P.6
-
42
-
-
0025884911
-
Rapid reamplification of PCR products purified in low melting-point agarose gels
-
Zintz CB, Beebe DC (1991). Rapid reamplification of PCR products purified in low melting-point agarose gels. Biotechniques, 11: 158-162.
-
(1991)
Biotechniques
, vol.11
, pp. 158-162
-
-
Zintz, C.B.1
Beebe, D.C.2
|