Solution structure of the RBD1,2 domains from human nucleolin

Journal of Biomolecular NMR

Volumn 47, Issue 1, 2010, Pages 79-83

  Arumugam, Sengodagounder ^a   Clarke Miller, M ^a   Maliekal, James ^a   Bates, Paula J ^a   Trent, John O ^a   Lane, Andrew N ^a  

^a UNIVERSITY OF LOUISVILLE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

APTAMER; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; NUCLEOLIN; RNA BINDING PROTEIN;

ACCURACY; ARTICLE; BINDING AFFINITY; BINDING SITE; CONTROLLED STUDY; GENE EXPRESSION; HUMAN VERSUS ANIMAL COMPARISON; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTEIN RNA BINDING; SEQUENCE HOMOLOGY; STRUCTURE ANALYSIS; THREE DIMENSIONAL IMAGING; TUMOR SUPPRESSOR GENE; WESTERN BLOTTING;

AMINO ACID SEQUENCE; ANIMALS; CRICETINAE; HUMANS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PHOSPHOPROTEINS; PROTEIN STRUCTURE, TERTIARY; RNA-BINDING PROTEINS; SEQUENCE ALIGNMENT;

EID: 77951665654     PISSN: 09252738     EISSN: 15735001     Source Type: Journal    
DOI: 10.1007/s10858-010-9412-1     Document Type: Article

References (14)

1. FHT Allain P Bouvet T Dieckmann J Feigon 2000 Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin EMBO J 19 24 6870 6881 10.1093/emboj/19.24.6870 (Pubitemid 32011680)
2. FHT Allain DE Gilbert P Bouvet J Feigon 2000 Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target J Mol Biol 303 2 227 241 10.1006/jmbi.2000.4118
3. PJ Bates DA Laber DM Miller SD Thomas JO Trent 2009 Discovery and development of the G-rich oligonucleotide AS1411 as a novel treatment for cancer Exp Mol Pathol 86 3 151 164 10.1016/j.yexmp.2009.01.004
4. F Delaglio S Grzesiek GW Vuister G Zhu J Pfeifer A Bax 1995 Nmrpipe-a multidimensional spectral processing system based on Unix pipes J Biomol NMR 6 3 277 293 10.1007/BF00197809
5. LD Finger L Trantirek C Johansson J Feigon 2003 Solution structures of stem-loop RNAs that bind to the two N-terminal RNA-binding domains of nucleolin Nucleic Acids Res 31 22 6461 6472 10.1093/nar/gkg866 (Pubitemid 37508750)
6. H Ginisty H Sicard B Roger P Bouvet 1999 Structure and functions of nucleolin J Cell Sci 112 6 761 772
7. AC Girvan Y Teng LK Casson SD Thomas S Juliger MW Ball JB Klein WM Pierce SS Barve PJ Bates 2006 AGRO100 inhibits activation of nuclear factor-kappa B (NF-kappa B) by forming a complex with NF-kappa B essential modulator (NEMO) and nucleolin Mol Cancer Ther 5 7 1790 1799 10.1158/1535-7163.MCT-05-0361 (Pubitemid 44323247)
8. P Guntert C Mumenthaler K Wuthrich 1997 Torsion angle dynamics for NMR structure calculation with the new program DYANA J Mol Biol 273 1 283 298 10.1006/jmbi.1997.1284 (Pubitemid 27460230)
9. T Herrmann P Güntert K Wüthrich 2002 Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA J Mol Biol 319 209 227 10.1016/S0022-2836(02)00241-3 (Pubitemid 34729497)
10. C Johansson LD Finger L Trantirek TD Mueller S Kim IA Laird-Offringa J Feigon 2004 Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target J Mol Biol 337 4 799 816 10.1016/j.jmb.2004.01.056 (Pubitemid 38368926)
11. R Koradi M Billeter K Wüthrich 1996 MOLMOL: a program for display and analysis of macromolecular structures J Mol Graph 14 29 32
12. DM Miller DA Laber PJ Bates JO Trent BS Taft GH Kloecker 2006 Extended phase I study of AS1411 in renal and non-small cell lung cancers Ann Oncol 17 147 148
13. Y Shen F Delaglio G Cornilescu A Bax 2009 TALOS plus: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts J Biomol NMR 44 4 213 223 10.1007/s10858-009-9333-z
14. R Tuteja N Tuteja 1998 Nucleolin: a multifunctional major nucleolar phosphoprotein Crit Rev Biochem Mol Biol 33 6 407 436 10.1080/10409239891204260 (Pubitemid 29063527)