Fabrication and characterization of a sialoside-based carbohydrate microarray biointerface for protein binding analysis with surface plasmon resonance imaging

ACS Applied Materials and Interfaces

Volumn 1, Issue 8, 2009, Pages 1755-1762

  Linman, Matthew J ^a   Yu, Hai ^b   Chen, Xi ^b   Cheng, Quan ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

biointerface; biosensor; biotinylated sialosides; carbohydrate microarray; surface plasmon resonance imaging

Indexed keywords

ARRAY ELEMENTS; ARRAY SURFACE; BIOINTERFACES; BIOLOGICAL INTERACTIONS; BIOTINYLATED SIALOSIDES; CARBOHYDRATE MICROARRAY; CARBOHYDRATE MICROARRAYS; CHOLERA TOXIN; COATED SURFACE; CONTACT PRINTING; COVALENT LINKAGE; DIFFERENTIAL BINDING; EXPERIMENTAL CONDITIONS; FUNCTIONALIZED SURFACES; GOOD DATA; HIGH QUALITY; HIGH-THROUGHPUT SCREENING; IMMOBILIZATION METHOD; IN-DEPTH STUDY; METHOD DEVELOPMENT; MULTIPLEXED DETECTION; NEUTRAVIDIN; NONUNIFORM ARRAYS; PROTEIN BINDING; SAMBUCUS NIGRA; SIALIC ACIDS; SIALOSIDE; SPECTROSCOPIC MEASUREMENTS; SURFACE PLASMON RESONANCE IMAGING;

AMINO ACIDS; BIOCHEMISTRY; BIOSENSORS; CARBOHYDRATES; CARBOXYLIC ACIDS; COMPUTERIZED TOMOGRAPHY; FLUORESCENCE MICROSCOPY; MULTIPLEXING; PLASMONS; PROTEINS; SURFACE CHEMISTRY; SURFACE PLASMON RESONANCE;

ATOMIC FORCE MICROSCOPY;

AGGLUTININ; AVIDIN; BIOMATERIAL; CARBOHYDRATE; N ACETYLNEURAMINIC ACID; NEUTRAVIDIN;

ARTICLE; ATOMIC FORCE MICROSCOPY; CHEMISTRY; EQUIPMENT DESIGN; GENETIC PROCEDURES; METABOLISM; METHODOLOGY; MICROARRAY ANALYSIS; PROTEIN BINDING; PROTEIN MICROARRAY; SAMBUCUS NIGRA; SPECTROPHOTOMETRY; SURFACE PLASMON RESONANCE; SURFACE PROPERTY;

AGGLUTININS; AVIDIN; BIOCOMPATIBLE MATERIALS; BIOSENSING TECHNIQUES; CARBOHYDRATES; EQUIPMENT DESIGN; MICROARRAY ANALYSIS; MICROSCOPY, ATOMIC FORCE; N-ACETYLNEURAMINIC ACID; PROTEIN ARRAY ANALYSIS; PROTEIN BINDING; SAMBUCUS NIGRA; SPECTROPHOTOMETRY; SURFACE PLASMON RESONANCE; SURFACE PROPERTIES;

EID: 77951645891     PISSN: 19448244     EISSN: 19448252     Source Type: Journal    
DOI: 10.1021/am900290g     Document Type: Article

References (63)

1. Hakomori, S. Glycoconj. J. 2004, 21, 125-137
2. Housman, B. T. and Mrksich, M. Chem. Biol. 2002, 9, 443-454
3. Park, S. and Shin, I. Angew. Chem., Int. Ed. 2002, 41, 3180-3182
4. Wang, D., Liu, S., Trummer, B. J., Deng, C. and Wang, A. Nat. Biotechnol. 2002, 20, 275-281
5. Fukui, S., Feizi, T., Galustian, C., Lawson, A. M. and Chai, W. Nat. Biotechnol. 2002, 20, 1011-1017
6. Horlacher, T. and Seeberger, P. H. Chem. Soc. Rev. 2008, 37, 1414-1422
7. Horlacher, T. and Seeberger, P. H. OMICS 2006, 10, 490-498
8. Liang, P.-H., Wu, C.-Y., Greenberg, W. A. and Wong, C.-H. Curr. Opin. Chem. Biol. 2008, 12, 86-92
9. De Paz, J. L. and Seeberger, P. H. QSAR Comb. Sci. 2006, 25, 1027-1032
10. Culf, A. S., Cuperlovic-Culf, M. and Ouellette, R. J. OMICS 2006, 10, 289-310
11. Park, S., Lee, M.-R. and Shin, I. Chem. Commun. 2008, 4389-4399
12. Dulcey, C. S., Georger, J. H., Krauthamer, V., Stenger, D. A., Fare, T. L. and Calvert, J. M. Science 1991, 252, 551-554
13. Allain, L. R., Stratis-Cullum, D. N. and Vo-Dinh, T. Anal. Chim. Acta 2004, 518, 77-85
14. Tseng, F. G., Kim, C. J. and Ho, C. M. J. Microelectromech. S. 2002, 11, 427-436
15. Walther, M., Stillman, B., Fribe, A. and Beator, J. http://www.whatman. com/, 2007, pp 7 - 8.
16. Rose, D. In Microarray Biochip Technology; Schena, M., Ed.; Eaton Publishing: Natick, MA, 2000, pp 19 - 38.
17. Clark, S. M., Harnilton, G. E., Nordmeyer, R. A., Uber, D., Cornell, E. W., Brown, N., Segraves, R., Davis, R., Albertson, D. G. and Pinkel, D. Anal. Chem. 2008, 80, 7639-7642
18. Burkert, K., Neumann, T., Wang, J. J., Jonas, U., Knoll, W. and Ottleben, H. Langmuir 2007, 23, 3478-3484
19. Rieger, M., Cervino, C., Sauceda, J. C., Niessner, R. and Knopp, D. Anal. Chem. 2009, 81, 2373-2377
20. Piner, R. D., Zhu, J., Xu, F., Hong, S. H. and Mirkin, C. A. Science 1999, 283, 661-663
21. Natarajan, S., Hatch, A., Myszka, D. G. and Gale, B. K. Anal. Chem. 2008, 80, 8561-8567
22. Ruiz, S. A. and Chen, C. S. Soft Matter 2007, 3, 168-177
23. Weibel, C. J. Assoc. Lab. Automation 2002, 7, 91-96
24. Barbulovic-Nad, I., Lucente, M., Sun, Y., Zhang, M. J., Wheeler, A. R. and Bussmann, M. Crit. Rev. Biotechnol. 2006, 26, 237-259
25. Mace, M. L., Montagu, J., Rose, S. D. and Mcguinness, G. In Microarray Biochip Technology; Eaton Publishing: Natick, MA, 2000, pp 39 - 64.
26. Müller, U. R. and Papen, R. In Microarray Technology and Its Applications; Müller, U. R. and Nicolau, D. V., Eds.; Springer: Berlin, 2005, pp 73 - 77.
27. Stybayeva, G., Zhu, H., Ramanculov, E., Dandekar, S., George, M. and Revzin, A. Biochem. Bioph. Res. Co. 2009, 380, 575-580
28. Lee, J. Y., Shah, S. S., Zimmer, C. C., Liu, G. Y. and Revzin, A. Langmuir 2008, 24, 2232-2239
29. Nishizuka, S., Charboneau, L., Young, L., Major, S., Reinhold, W. C., Waltham, M., Kouros-Mehr, H., Bussey, K. J., Lee, J. K., Espina, V., Munson, P. J., Petricoin, E., Liotta, L. A. and Weinstein, J. N. Proc. Natl. Acad. Sci. U. S. A. 2003, 100, 14229-14234
30. Andreeva, L. V., Koshkin, A. V., Letiedev-Stepanov, P. V., Petrov, A. N. and Alfimov, M. V. Colloid Surface A 2007, 300, 300-306
31. Lausted, C., Hu, Z. Y. and Hood, L. Mol. Cell. Proteomics 2008, 7, 2464-2474
32. Seidel, M. and Niessner, R. Anal. Bioanal. Chem. 2008, 391, 1521-1544
33. Dhayal, M. and Ratner, D. M. Langmuir 2009, 25, 2181-2187
34. Chen, Y. L., Nguyen, A., Niu, L. F. and Corn, R. M. Langmuir 2009, 25, 5054-5060
35. Linman, M. J., Taylor, J. D., Yu, H., Chen, X. and Cheng, Q. Anal. Chem. 2008, 80, 4007-4013
36. Mercey, E., Sadir, R., Maillart, E., Roget, A., Baleux, F., Lortat-Jacob, H. and Livache, T. Anal. Chem. 2008, 80, 3476-3482
37. Karamanska, R., Clarke, J., Blixt, O., Macrae, J. I., Zhang, J. Q., Crocker, P. R., Laurent, N., Wright, A., Flitsch, S. L., Russell, D. A. and Field, R. A. Glycoconj. J. 2008, 25, 69-74
38. Liu, W., Chen, Y. and Yan, M. Analyst 2008, 133, 1268-1273
39. Wilkop, T., Wang, Z. and Cheng, Q. Langmuir 2004, 20, 11141-11148
40. Duverger, E., Coppin, A., Strecker, G. and Monsigny, M. Glycoconj. J. 1999, 16, 793-800
41. Taylor, J. D., Linman, M. J., Wilkop, T. and Cheng, Q. Anal. Chem. 2009, 81, 1146-1153
42. Wang, Z., Wilkop, T., Han, J.-H., Dong, Y., Linman, M. J. and Cheng, Q. Anal. Chem. 2008, 80, 6397-6404
43. Geng, P., Zhang, X. N., Meng, W. W., Wang, Q. J., Zhang, W., Jin, L. T., Feng, Z. and Wu, Z. R. Electrochim. Acta 2008, 53, 4663-4668
44. Jung, L. S., Campbell, C. T., Chinowsky, T. M., Mar, M. N. and Yee, S. S. Langmuir 1998, 14, 5636-5648
45. Sjolander, S. and Urbaniczky, C. Anal. Chem. 1991, 63, 2338-2345
46. Fair, B. D. and Jamieson, A. M. J. Colloid Interface Sci. 1980, 77, 525-534
47. Zhang, Y., Meiling, W., Qingji, X., Xianhui, W. and Shouzhuo, Y. Sensor Actuat. B, Chem. 2005, 105, 454-463
48. Aung, K. M. M., Ho, X. N. and Su, X. D. Sensor Actuat. B, Chem. 2008, 131, 371-378
49. Kim, N. H., Baek, T. J., Park, H. G. and Seong, G. H. Anal. Sci. 2007, 23, 177-181
50. Whelan, R. J. and Zare, R. N. Anal. Chem. 2003, 75, 1542-1547
51. Shibuya, N., G, I. J., Broekaert, W. F., Nsimba-Lubaki, M., Peeters, B. and Peumans, W. J. J. Biol. Chem. 1987, 262, 1596-1601
52. Knibbs, R. N., Goldstein, I. J., Ratcliffe, R. M. and Shibuya, N. J. Biol. Chem. 1991, 266, 83-88
53. Hiller, Y., Gershoni, J. M., Bayer, E. A. and Wilchek, M Biochem. J. 1987, 248, 167-171
54. Kheirolomoom, A., Dayton, P. A., Lum, A. F. H., Little, E., Paoli, E. E., Zheng, H. and Ferrara, K. W. J. Controlled Release 2007, 118, 275-284
55. Chen, S., Liu, L., Zhou, J. and Jiang, S. Langmuir 2003, 19, 2859-2864
56. Seo, J. H., Adachi, K., Lee, B. K., Kang, D. G., Kim, Y. K., Kim, K. R., Lee, H. Y., Kawai, T. and Cha, H. J. Bioconjugate Chem. 2007, 18, 2197-2201
57. Shin, I., Park, S. and Lee, M.-R. Chem. - Eur. J. 2005, 11, 2894-2901
58. Saerens, D., Huang, L., Bonroy, K. and Muyldermans, S. Sensors 2008, 8, 4669-4686
59. Ferretti, S., Paynter, S., Russell, D. A., Sapsford, K. E. and Richardson, D. J. Trends Anal. Chem. 2000, 19, 530-540
60. Labib, M., Hedstrom, M., Amin, M. and Mattiasson, B. Anal. Chim. Acta 2009, 634, 255-261
61. Schaferling, M., Riepl, M., Pavlickova, P., Paul, H., Kambhampati, D. and Liedberg, B. Microchim. Acta 2003, 142, 193-203
62. Phillips, K. S., Han, J.-H., Martinez, M., Wang, Z., Carter, D. and Cheng, Q. Anal. Chem. 2006, 78, 596-603
63. Linman, M. J., Culver, S. P. and Cheng, Q. Langmuir 2009, 25, 3075-3082