Hybrid nanoporous silicon optical biosensor architectures for biological sample analysis

Progress in Biomedical Optics and Imaging - Proceedings of SPIE

Volumn 7553, Issue , 2010, Pages

  Bonanno, Lisa M ^a   Zheng, Hong ^b   DeLouise, Lisa A ^a,b  

^a University of Rochester   (United States)

^b UNIVERSITY OF ROCHESTER MEDICAL CENTER   (United States)

Author keywords

Hydrogel; Nanoparticle; Optical sensor; Polyacrylamide; Porous silicon

Indexed keywords

BIOLOGICAL SAMPLES; CROSSLINKED; CROSSLINKS; CYSTAMINE; FUNCTIONALIZED; GEL SWELLING; HIGH REFRACTIVE INDEX; HYBRID POROUS SILICON; HYDROGEL NANOPARTICLES; LIMIT OF DETECTION; LOWER LIMIT OF DETECTIONS; METHYLENE BISACRYLAMIDE; MULTIVALENT RECEPTORS; NAKED-EYE; NANO-POROUS SILICON; OPTICAL BIO-SENSORS; OPTICAL SIGNAL AMPLIFICATION; OPTICAL TRANSDUCERS; POLYACRY LAMIDE; POLYACRYLAMIDE HYDROGELS; POLYMER BACKBONES; POLYMER CHAINS; PROOF OF CONCEPT; REFRACTIVE INDEX CHANGES; SIGNAL TO NOISE; TECHNOLOGY PLATFORMS; TUNABLE MATERIALS; WORK FOCUS;

AMPLIFICATION; BIOSENSORS; DISSOLUTION; FUNCTIONAL POLYMERS; LIGHT REFRACTION; NANOPARTICLES; NANOSENSORS; OPTICAL SENSORS; OPTICAL SIGNAL PROCESSING; PHOSPHORUS COMPOUNDS; POROUS SILICON; REFRACTIVE INDEX; REFRACTOMETERS; SEMICONDUCTOR QUANTUM DOTS; SIGNAL DETECTION; SIGNAL PROCESSING; SWELLING; TARGETS; TRANSDUCERS;

HYDROGELS;

EID: 77951585849     PISSN: 16057422     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1117/12.847973     Document Type: Conference Paper

References (40)

1. Kalorama Information, "World Markets for Point of Care Diagnostics", 13 (2009)
2. Kalorama Information, "Swine Influenza Market Alert (Latest Data, Company Profiles, Implications for Immunoassays and Molecular Assays)" (2009)
3. Ying Wang, Zhiyong Tang, Nicholas A. Kotov, " Bioapplication of nanosemiconductors", Materials Today 8(5), 20-31 (2005)
4. Kewal K. Jain, "Nanotechnology in clinical laboratory diagnostics" Clinica Chimica Acta 358(1/2), 37-54 (2005)
5. Lisa Bonanno, L. DeLouise, "Tunable Detection Sensitivity of Opiates and Their Metabolites in Urine via a Label-Free Porous Silicon Competitive Inhibition Immunosensor", Anal Chem, accepted, (2010)
6. Michael J. Sailor, "Color Me Sensitive: Amplification and Discrimination in Photonic Silicon Nanostructures ", ACS Nano 1(4), 248-252 (2007)
7. Andrew Jane, Roman Dronov, Alastair Hodges, Nicolas H. Voelcker, "Porous silicon biosensors on the advance", Trends in Biotechnology 27(4), 230-239 (2009)
8. Bonanno, L. M., DeLouise, L. A. "Whole blood optical biosensor", Biosens. And Bioelectron. 23, 444-448 (2007).
9. Huimin Ouyang, Lisa A. DeLouise, Benjamin L. Miller, Philippe M. Fauchet, "Label-free quantitative detection of protein using macroporous silicon photonic bandgap biosensors", Anal. Chem. 79(4), 1502-1506 (2007)
10. L.A. DeLouise , B.L. Miller, "Optimization of Mesoporous Silicon Microcavities for Proteomic Sensing" Mat. Res. Soc. Symp. Proc. (782), A5.3.1, (2004)
11. Guoguang Rong, Ali Najmaie, John E. Sipe, Sharon M. Weiss, "Nanoscale porous silicon waveguide for label-free DNA sensing" Biosensors and Bioelectronics 23(10), 1572-1576 (2008)
12. Girolamo Di Francia, Vera La Ferrara, Sonia Manzo, Salvatore Chiavarini, "Towards a label-free optical porous silicon DNA sensor", Biosensors and Bioelectronics 21(4), 661-665 (2005).
13. Steinem, C. et al "DNA hybridization-enhanced porous silicon corrosion: mechanistic investigations and prospect for optical interferometric biosensing.", Tetrahedron 60, 11259-11267 (2004) (Pubitemid 39425244)
14. Kristopher A. Kilian, Till Böcking, Katharina Gaus, Michael Gal, J. Justin Gooding "Peptide-Modified Optical Filters for Detecting Protease Activity", ACS Nano 1 (4), 355-361 (2007)
15. L.A. DeLouise, B.L. Miller, "Cross-correlation of Optical Microcavity Biosensor Response with Immobilized Enzyme Activity - Insights into Biosensor and Bioassay Sensitivity", Anal. Chem. 77(10), 3222-3230 (2005)
16. L.A. DeLouise , B.L. Miller, "Enzyme Immobilization in Porous Silicon Biochip - Quantitative Analysis of the Kinetic Parameters for Glutathione-S-Transferases ", Anal. Chem. 77(7), 1950-1956 (2005)
17. M. M. Orosco, C. Pacholski, G. M. Miskelly, M. J. Sailor "TI: Protein-Coated Porous-Silicon Photonic Crystals for Amplified Optical Detection of Protease Activity", Advanced Materials 18(11), 1393-1396 (2006)
18. Victor S.Y. Lin, Kianoush Motesharei, Keiki-Pua S. Dancil, Michael J. Sailor, and M. Reza Ghadiri "A Porous Silicon-Based Optical Interferometric Biosensor", Science 278 (5339), 840 (1997)
19. L.A. DeLouise , B.L. Miller , " Trends in Porous Silicon Biomedical Devices - Tuning Microstructure and Performance Trade-offs in Optical Biosensors ", Proceedings of SPIE Vol. 5357, 111-125 (2004).
20. Dancil, K.P.S., Greiner, D. P.; Sailor, M. J. "A Porous Silicon Optical Biosensor: Detection of Reversible Binding of IgG to a Protein A-Modified Surface", J. Am. Chem. Soc. 121, 7925 7930 (1999).
21. Lin, VSY, et al. "A porous silicon-based optical interferometric biosensor.", Science 278, 840-843 (1997)
22. Inez N. Lees, Haohao Lin,, Christie A. Canaria,, Christian Gurtner,, Michael J. Sailor, and, Gordon M. Miskelly, "Chemical Stability of Porous Silicon Surfaces Electrochemically Modified with Functional Alkyl Species", Langmuir 19 (23), 9812-9817 (2003).
23. Canham L.T., Stewart M.P., Buriak J.M., Reeves C.L., Anderson M., Squire , Allcock P., and Snow P.A. "Derivatized Porous Silicon Mirrors: Implantable Optical Components with Slow Resorbability", Physica Status Solidi (a) 182, 521 (2000)
24. Buriak, J. M., Allen, M. J. "Lewis Acid Mediated Functionalization of Porous Silicon with Substituted Alkenes and Alkynes "J. Am. Chem. Soc. 120, 1339 1340 (1998)
25. Kilian KA, Böcking T, Gooding JJ. "The importance of surface chemistry in mesoporous materials: lessons from porous silicon biosensors." Chem Commun. 14(6), 630-640 (2009)
26. Boukherroub, R.; Wojtyk, J. T. C.; Wayner, D. D. M.; Lockwood, D. J. "Thermal hydrosilylation of undecylenic acid with porous silicon", J. Electrochem. Soc. 149, 59-63 (2002)
27. Canham, L. T.; Reeves, C. L.; Newey, J. P.; Houlton, M. R.; Cox, T. I.; Buriak, J. M., Stewart, M. P. "Derivatized Mesoporous Silicon With Dramatically Improved Stability in Simulated Human Blood Plasma", Advanced Materials 11, 1505-1509 (1999)
28. Bonanno, L. M., DeLouise, L. A. " Steric crowding effects on target detection in an affinity biosensor.", Langmuir 23, 5817-5823 (2007).
29. L. Bonanno, L. DeLouise "Integration of a chemical responsive hydrogel into a porous silicon photonic sensor for visual colorimetric readout", Adv. Functional Mat., (2010).
30. Jun Wang , Yuehe Lin, "Functionalized carbon nanotubes and nanofibers for biosensing applications", Trends Analyt Chem. 27(7), 619-626 ( 2008).
31. Jensen, B.; Torabi, A. " Refractive index of hexagonal II-VI compounds CdSe, CdS and CdSexS1-x ", Journal of the Optical Society of America B: Optical Physics 3(6), 857-863 (1986).
32. Voelcker N.H., et al "Catalyzed oxidative corrosion of porous silicon used as an optical transducer for ligand-receptor interactions." , ChemBioChem. 9, 1776-1786 (2008)
33. Lisa M. Bonanno, Lisa A. DeLouise, "Optical Detection of Polyacrylamide Swelling Behavior in Porous Silicon Sensor", Mat. Res. Soc. Symp. Proc. 1133, AA01 05 (2008)
34. Lisa M. Bonanno, Lisa A. DeLouise, "Design of a Hybrid Amine Functionalized Polyacrylamide Hydrogel-Porous Silicon Optical Sensor", Proc. SPIE 7167 , 71670F-71670F-11 (2009).
35. Yusuke Imai, Atsushi Terahara, Yukiya Hakuta, Keitaro Matsui, Hiromichi Hayashi, Nobuhiko Ueno, "Transparent poly(bisphenol A carbonate-based nanocomposites with high refractive index nanoparticle", European Polymer Journal 45( 3), 630-638 (2009).
36. Changli Lü, Zhanchen Cui, Yao Wang, Zuo Li, Cheng Guan, Bai Yang and Jiacong Shen "Preparation and characterization of ZnS-polymer nanocomposite films with high refractive index", J. Mater. Chem. 13, 2189-2195 (2003).
37. L. Zimmermann, Martin Weibel, Walter Caseri, and Ulrich W. Suter "High refractive index films of polymer nanocomposites", J. Mater. Res. 8(7), 1742-1748 ( 1993).
38. Chatterjee, A.N., Yu, Q., Moore, J.S., Aluru, N.R. "Mathematical Modeling and Simulation of Dissolvable Hydrogels" , J. Aerospace Eng. 16, 55-64 (2003). (Pubitemid 40265227)
39. Stellwagen NC., "Apparent pore size of polyacrylamide gels: comparison of gels cast and run in Tris-acetate-EDTA and Tris-borate-EDTA buffers" , Electrophoresis 19(10), 1542-1547 (1998).
40. Holmes , Stellwagen, "Estimation of polyacrylamide gel pore size from Ferguson plots of linear DNA fragments. II. Comparison of gels with different crosslinker concentrations, added agarose and added linear polyacrylamide", Electrophoresis 12, 612-619 (1991).