Evaluation of the impacts of different nuclear DNA content in the hull, endosperm, and embryo of rice seeds on GM rice quantification

Journal of Agricultural and Food Chemistry

Volumn 58, Issue 8, 2010, Pages 4582-4587

  Liu, Donger ^a   Shen, Jie ^a   Yang, Litao ^a   Zhang, Dabing ^a  

^a SHANGHAI JIAO TONG UNIVERSITY   (China)

Author keywords

DNA content; Haploid genome; Reference material; Rice; TT51 1

Indexed keywords

PLANT DNA; PRIMER DNA;

ARTICLE; CELL NUCLEUS; GENETICS; METABOLISM; NUCLEOTIDE SEQUENCE; PLANT SEED; POLYMERASE CHAIN REACTION; PRENATAL DEVELOPMENT; RICE; TRANSGENIC PLANT;

BASE SEQUENCE; CELL NUCLEUS; DNA PRIMERS; DNA, PLANT; ORYZA SATIVA; PLANTS, GENETICALLY MODIFIED; POLYMERASE CHAIN REACTION; SEEDS;

ORYZA SATIVA;

EID: 77951289882     PISSN: 00218561     EISSN: 15205118     Source Type: Journal    
DOI: 10.1021/jf9044233     Document Type: Article

References (26)

1. OECD Environment, Health and Safety Publications Series on the Safety of Novel Foods and Feeds No. 10. Consensus document on compositional considerations for new varieties of rice (Oryza sativa): key food and feed nutrients and anti-nutrients. ENV/JM/MONO, 2004, 15. http://www.oecd.org/ehs/.
2. Thiagarajasubramanian, A. Recent advances in the genetic engineering of rice crops MMG 445 Basic Biotechnol. J. 2005, 1, 1
3. Bajaj, S.; Mohanty, A. Recent advances in rice biotechnology - towards genetically superior transgenic rice Plant Biotechnol. J. 2005, 3, 275-307
4. Agriculture & Biotechnology Strategies Inc, Canada. Information on GM approved products: rice. GM Crop Database. http://www.agbios.com/dbase.php- action=Submit&hstIDXCode=14 (accessed Jan 20, 2010).
5. Xiao, G. Y. Recent advances in development of herbicide resistant transgenic hybrid rice in China Rice Sci. 2009, 16 (3) 235-239
6. Tu, J.; Datta., K.; Alam, M. F.; Fan, Y. L.; Khush, G. S.; Datta, S. K. Expression and function of a hybrid Bt toxin gene in transgenic rice conferring resistance to insect pests Plant Biotechnol. 1998, 15 (4) 195-203
7. Tu, J.; Zhang, G. A.; Datta, K.; Xu, C. G.; He, Y. Q.; Zhang, Q. F.; Khush, G. S.; Datta, S. K. Field performance of transgenic elite commercial hybrid rice expressing Bacillus thuringiensis κ-endotoxin Nat. Biotechnol. 2000, 18, 1101-1104
8. Tu, J.; Datta, K.; Oliva, N.; Zhang, G. A.; Xu, C. G.; Khush, G. S.; Zhang, Q. F.; Datta, S. K. Site-independently integrated transgenes in the elite restorer rice line Minghui 63 allow removal of a selectable marker from the gene of interest by self-segregation Plant Biotechnol. J. 2003, 1, 155-165
9. European Commission. Regulation (EC) No. 1829/2003 and 1830/2003. Off. J. Eur. Communities 2003, L268, 1-28. http://eur-lex.europa.eu/LexUriServ/ LexUriServ.do-uri=OJ:L:2003:268:0024:0028:EN:PDF
10. Notification 2000-31; Ministry of Agriculture and Forestry of Korea: Seoul, Korea, 2000.
11. Notification 1775; Food and Marketing Bureau, Ministry of Agriculture, Forestry, and Fisheries of Japan: Tokyo, Japan, 2000.
12. Order 10. Administrative Rules for Safety Assessment of Agricultural GMO; Ministry of Agriculture: Beijing, China, 2002.
13. Yang, L. T.; Guo, J. C.; Pan, A. H.; Zhang, H. B.; Zhang, K. W.; Wang, Z. M.; Zhang, D. B. Event-specific quantitative detection of nine genetically modified maizes using one novel standard reference molecule J. Agric. Food Chem. 2007, 55, 15-24
14. Yang, L. T.; Pan, A. H.; Zhang, H. B.; Guo, J. C.; Yin, C. S.; Zhang, D. B. Event-specific qualitative and quantitative polymerase chain reaction analysis for genetically modified canola T45 J. Agric. Food Chem. 2006, 54, 9735-9740
15. Yang, L. T.; Guo, J. C.; Zhang, H. B.; Liu, J.; Zhang, D. B. Qualitative and quantitative event-specific PCR detection methods for Oxy-235 canola based on the 3′ integration flanking sequence J. Agric. Food Chem. 2008, 56, 1804-1809
16. Zhang, D.; Corlet, Aurélie.; Fouilloux, Stephane Impact of genetic structures on haploid genome-based quantification of genetically modified DNA: theoretical considerations, experimental data in MON 810 maize kernels (Zea mays L.) and some practical applications Transgenic Res. 2008, 17, 393-402
17. Brown, R. C.; Lemmon, B. E.; Olsen, O. A. Development of the endosperm in rice (Oryza sativa L.): cellularization J. Plant Res. 1996, 109, 301-313
18. Trifa, Y.; Zhang, David DNA content in embryo and endosperm of maize kernel (Zea mays L.): impact on GMO quantification J. Agric. Food Chem. 2004, 52, 1044-1048
19. Wu, G.; Wu, Y.; Nie, S.; Zhang, L.; Xiao, L.; Cao, Y.; Lu, C. Real-time PCR method for detection of the illegally released transgenic rice event TT51-1 Food Chem. 2010, 119, 417-422
20. Jiang, L. X.; Yang, L. T.; Zhang, H. B.; Guo, J. C.; Mazzara, M.; Van Den Eede, G.; Zhang, D. B. International collaborative study of the endogenous reference gene, sucrose phosphate synthase (sps), used for qualitative and quantitative analysis of genetically modified rice J. Agric. Food Chem. 2009, 57, 3525-3532
21. Arumuganathan, K.; Earle, E. D. Nuclear DNA content of some important plant species Plant Mol. Biol. Rep. 1991, 9, 208-218
22. Singer, V. L.; Jones, L.J.; Yue, S. T.; Haugland, R. P. Characterization of picoGreen reagent and development of a fluorescence-based solution assay for double-stranded DNA quantitation Anal. Biochem. 1997, 249, 228-238
23. Xu, W. T.; Huang, K. L.; Deng, A. K.; Liang, Z. H.; Luo, Y. B. Variations of tissue DNA density and nuclear DNA content in soybean lines and their impacts on the GMO quantification Food Control 2007, 18, 1300-1306
24. Prokisch, J; Zeleny, R; Trapmann, S; Le Guern, L; Schimmel, H; Kramer, G. N; Pauwels, J. Estimation of the minimum uncertainty of DNA concentration in a genetically modified maize sample candidate certified reference material Fresenius' J. Anal. Chem. 2001, 370, 935-939
25. Corbisier, P.; Broothaerts, W.; Gioria, S. Toward metrological traceability for DNA fragment ratios in GM quantification. 1. effect of DNA extraction methods on the quantitative determination of Bt176 corn by real-time PCR J. Agric. Food Chem. 2007, 55, 3249-3257 (Pubitemid 46806533)
26. International Organization of Standardization. ISO 21571:2005, Foodstuffs - Methods of Analysis for the Detection of Genetically Modified Organisms and Derived Products - Nucleic Acid Extraction, (2005. http://www.iso.org/iso/ catalogue-detail.htm-csnumber=34616.