-
1
-
-
0024447153
-
Genetic basis of starvation survival in non differentiating bacteria
-
Matin A, Auger EA, Blum PH, Schultz JE, (1989) Genetic basis of starvation survival in non differentiating bacteria. Annu Rev Microbiol 43: 293-316.
-
(1989)
Annu Rev Microbiol
, vol.43
, pp. 293-316
-
-
Matin, A.1
Auger, E.A.2
Blum, P.H.3
Schultz, J.E.4
-
2
-
-
33750512774
-
Nucleoid organization and the maintenance of DNA integrity in E. coli, B. subtilis and D. radiodurans
-
Frenkiel-Krispin D, Minsky A, (2006) Nucleoid organization and the maintenance of DNA integrity in E. coli, B. subtilis and D. radiodurans. J Struct Biol 156: 311-319.
-
(2006)
J Struct Biol
, vol.156
, pp. 311-319
-
-
Frenkiel-Krispin, D.1
Minsky, A.2
-
3
-
-
0027083350
-
A novel DNA-binding protein with regulatory and protective roles in starved Escherichia coli
-
Almirón M, Link AJ, Furlong D, Kolter R, (1992) A novel DNA-binding protein with regulatory and protective roles in starved Escherichia coli. Genes Dev 6: 2646-2654.
-
(1992)
Genes Dev
, vol.6
, pp. 2646-2654
-
-
Almirón, M.1
Link, A.J.2
Furlong, D.3
Kolter, R.4
-
4
-
-
3042660143
-
Fundamental structural units of the Escherichia coli nucleoid revealed by atomic force microscopy
-
Kim J, Yoshimura SH, Hizume K, Ohniwa RL, Ishihama A, et al.(2004) Fundamental structural units of the Escherichia coli nucleoid revealed by atomic force microscopy. Nucleic Acids Res 32: 1982-1992.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1982-1992
-
-
Kim, J.1
Yoshimura, S.H.2
Hizume, K.3
Ohniwa, R.L.4
Ishihama, A.5
-
5
-
-
0036019356
-
Proteomics analysis of carbon-starved Mycobacterium smegmatis: induction of Dps-like protein
-
Gupta S, Pandit SB, Srinivasan N, Chatterji D, (2002) Proteomics analysis of carbon-starved Mycobacterium smegmatis: induction of Dps-like protein. Protein Eng 15: 503-512.
-
(2002)
Protein Eng
, vol.15
, pp. 503-512
-
-
Gupta, S.1
Pandit, S.B.2
Srinivasan, N.3
Chatterji, D.4
-
6
-
-
0038813712
-
Bimodal protection of DNA by Mycobacterium smegmatis DNA-binding protein from stationary phase cells
-
Gupta S, Chatterji D, (2003) Bimodal protection of DNA by Mycobacterium smegmatis DNA-binding protein from stationary phase cells. J Biol Chem 278: 5235-5241.
-
(2003)
J Biol Chem
, vol.278
, pp. 5235-5241
-
-
Gupta, S.1
Chatterji, D.2
-
7
-
-
27144476584
-
Reassessment of protein stability, DNA binding, and protection of Mycobacterium smegmatis Dps
-
Ceci P, Ilari A, Falvo E, Giangiacomo L, Chiancone E, (2005) Reassessment of protein stability, DNA binding, and protection of Mycobacterium smegmatis Dps. J Biol Chem 280: 34776-34785.
-
(2005)
J Biol Chem
, vol.280
, pp. 34776-34785
-
-
Ceci, P.1
Ilari, A.2
Falvo, E.3
Giangiacomo, L.4
Chiancone, E.5
-
8
-
-
37449010013
-
Identification and characterization of the dps promoter of Mycobacterium smegmatis: promoter recognition by stress-specific extracytoplasmic function sigma factors σH and σF
-
Chowdhury R, Gupta S, Chatterji D, (2007) Identification and characterization of the dps promoter of Mycobacterium smegmatis: promoter recognition by stress-specific extracytoplasmic function sigma factors σH and σF J Bacteriol 189: 8973-8981.
-
(2007)
J Bacteriol
, vol.189
, pp. 8973-8981
-
-
Chowdhury, R.1
Gupta, S.2
Chatterji, D.3
-
9
-
-
37349040333
-
Structural studies on the second Mycobacterium smegmatis Dps: invariant and variable features of structure, assembly and function
-
Roy S, Saraswathi R, Chatterji D, Vijayan M, (2008) Structural studies on the second Mycobacterium smegmatis Dps: invariant and variable features of structure, assembly and function. J Mol Biol 375: 948-959.
-
(2008)
J Mol Biol
, vol.375
, pp. 948-959
-
-
Roy, S.1
Saraswathi, R.2
Chatterji, D.3
Vijayan, M.4
-
10
-
-
34247590894
-
Estimation of Förster's distance between two ends of Dps protein from mycobacteria: Distance heterogeneity as a function of oligomerization and DNA binding
-
Chowdhury RP, Chatterji D, (2007) Estimation of Förster's distance between two ends of Dps protein from mycobacteria: Distance heterogeneity as a function of oligomerization and DNA binding. Biophys Chem 128: 19-29.
-
(2007)
Biophys Chem
, vol.128
, pp. 19-29
-
-
Chowdhury, R.P.1
Chatterji, D.2
-
11
-
-
34249941286
-
Role of N and C-terminal tails in DNA binding and assembly in Dps: structural studies of Mycobacterium smegmatis Dps deletion mutants
-
Roy S, Saraswathi R, Gupta S, Sekar K, Chatterji D, et al.(2007) Role of N and C-terminal tails in DNA binding and assembly in Dps: structural studies of Mycobacterium smegmatis Dps deletion mutants. J Mol Biol 370: 752-767.
-
(2007)
J Mol Biol
, vol.370
, pp. 752-767
-
-
Roy, S.1
Saraswathi, R.2
Gupta, S.3
Sekar, K.4
Chatterji, D.5
-
12
-
-
3042582299
-
X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps and Dps-like molecules
-
Roy S, Gupta S, Das S, Sekar K, Chatterji D, et al.(2004) X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps and Dps-like molecules. J Mol Biol 339: 1103-1113.
-
(2004)
J Mol Biol
, vol.339
, pp. 1103-1113
-
-
Roy, S.1
Gupta, S.2
Das, S.3
Sekar, K.4
Chatterji, D.5
-
13
-
-
0037371197
-
Purification, gene cloning, gene expression, and mutants of Dps from the obligate anaerobe Porphyromonas gingivalis
-
Ueshima J, Shoji M, Ratnayake DB, Abe K, Yoshida S, et al.(2003) Purification, gene cloning, gene expression, and mutants of Dps from the obligate anaerobe Porphyromonas gingivalis. Infect Immun 71: 1170-1178.
-
(2003)
Infect Immun
, vol.71
, pp. 1170-1178
-
-
Ueshima, J.1
Shoji, M.2
Ratnayake, D.B.3
Abe, K.4
Yoshida, S.5
-
14
-
-
0036091613
-
An iron-binding protein, Dpr, from Streptococcus mutans prevents iron-dependent hydroxyl radical formation in vitro
-
Yamamoto Y, Poole LB, Hantgan RR, Kamio Y, (2002) An iron-binding protein, Dpr, from Streptococcus mutans prevents iron-dependent hydroxyl radical formation in vitro. J Bacteriol 184: 2931-2939.
-
(2002)
J Bacteriol
, vol.184
, pp. 2931-2939
-
-
Yamamoto, Y.1
Poole, L.B.2
Hantgan, R.R.3
Kamio, Y.4
-
15
-
-
0942279510
-
Nucleoid restructuring in stationary-state bacteria
-
Frenkiel-Krispin D, Ben-Avraham I, Englander J, Shimoni E, Wolf SG, et al.(2004) Nucleoid restructuring in stationary-state bacteria. Mol Microbiol 51: 395-405.
-
(2004)
Mol Microbiol
, vol.51
, pp. 395-405
-
-
Frenkiel-Krispin, D.1
Ben-Avraham, I.2
Englander, J.3
Shimoni, E.4
Wolf, S.G.5
-
16
-
-
34249846924
-
The neutrophil-activating Dps protein of Helicobacter pylori, HP-NAP, adopts a mechanism different from Escherichia coli Dps to bind and condense DNA
-
Ceci P, Mangiarotti L, Rivetti C, Chiancone E, (2007) The neutrophil-activating Dps protein of Helicobacter pylori, HP-NAP, adopts a mechanism different from Escherichia coli Dps to bind and condense DNA. Nucleic Acids Res 35: 2247-22563.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 2247-22563
-
-
Ceci, P.1
Mangiarotti, L.2
Rivetti, C.3
Chiancone, E.4
-
17
-
-
10244243805
-
DNA condensation and self-aggregation of Escherichia coli Dps are coupled phenomena related to the properties of the N-terminus
-
Ceci P, Cellai S, Falvo E, Rivetti C, Rossi GL, et al.(2004) DNA condensation and self-aggregation of Escherichia coli Dps are coupled phenomena related to the properties of the N-terminus. Nucleic Acids Res 32: 5935-5944.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5935-5944
-
-
Ceci, P.1
Cellai, S.2
Falvo, E.3
Rivetti, C.4
Rossi, G.L.5
-
18
-
-
0026573628
-
Lethal overproduction of the Escherichia coli nucleoid protein H-NS: ultramicroscopic and molecular autopsy
-
Spurio R, Dürrenberger M, Falconi M, La Teana A, Pon C, et al.(1992) Lethal overproduction of the Escherichia coli nucleoid protein H-NS: ultramicroscopic and molecular autopsy. Mol Gen Genet 231: 201-211.
-
(1992)
Mol Gen Genet
, vol.231
, pp. 201-211
-
-
Spurio, R.1
Dürrenberger, M.2
Falconi, M.3
La Teana, A.4
Pon, C.5
-
19
-
-
0033021173
-
Modulation of the nucleoid, the transcription apparatus, and the translation machinery in bacteria for stationary phase survival
-
Ishihama A, (1999) Modulation of the nucleoid, the transcription apparatus, and the translation machinery in bacteria for stationary phase survival. Genes Cells 4: 135-143.
-
(1999)
Genes Cells
, vol.4
, pp. 135-143
-
-
Ishihama, A.1
-
20
-
-
0025081151
-
Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis
-
Snapper SB, Melton RE, Mustafa S, Kieser T, Jacobs WR, (1990) Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis. Mol Microbiol 4: 1911-1919.
-
(1990)
Mol Microbiol
, vol.4
, pp. 1911-1919
-
-
Snapper, S.B.1
Melton, R.E.2
Mustafa, S.3
Kieser, T.4
Jacobs, W.R.5
-
21
-
-
0027006036
-
A specific stain for the detection of non-heme iron proteins in polyacrylamide gels
-
Leong LM, Tan BH, Ho KK, (1992) A specific stain for the detection of non-heme iron proteins in polyacrylamide gels. Anal Biochem 207: 317-320.
-
(1992)
Anal Biochem
, vol.207
, pp. 317-320
-
-
Leong, L.M.1
Tan, B.H.2
Ho, K.K.3
-
22
-
-
0024297354
-
Multiple sequence alignment with hierarchical clustering
-
Corpet F, (1988) Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res 16: 10881-10890.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 10881-10890
-
-
Corpet, F.1
-
23
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J, Higgins D, Gibson T, (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.1
Higgins, D.2
Gibson, T.3
-
24
-
-
45949109669
-
MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences
-
Kumar S, Nei M, Dudley J, Tamura K, (2008) MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinformatics 9: 299-306.
-
(2008)
Brief Bioinformatics
, vol.9
, pp. 299-306
-
-
Kumar, S.1
Nei, M.2
Dudley, J.3
Tamura, K.4
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