Interaction between methylene blue and calfthymus deoxyribonucleic acid by spectroscopic technologies

Journal of Fluorescence

Volumn 20, Issue 1, 2010, Pages 261-267

  Tong, Changlun ^a   Hu, Zhou ^a   Wu, Jianmin ^b  

^a ZHEJIANG UNIVERSITY   (China)

^b ZHEJIANG UNIVERSITY   (China)

Author keywords

Binding modes; Calf thymus DNA; Interaction; Methylene blue; Spectrometry

Indexed keywords

BINDING MODES; CALF THYMUS; CALF THYMUS DNA; DEOXYRIBONUCLEIC ACIDS; DNA BASE PAIRS; ELECTROSTATIC INTERACTIONS; FLUORESCENCE POLARIZATION; FLUORESCENCE QUENCHING; FLUORESCENCE SPECTRA; INTERACTION; METHYLENE BLUE; MOLAR RATIO; PHOSPHATE GROUP; QUENCHING EFFECT; QUENCHING OF THE FLUORESCENCE; RED SHIFT; UV ABSORPTION SPECTRUM;

ABSORPTION; BINDING ENERGY; DNA; GENES; LIGHT ABSORPTION; ORGANIC ACIDS; POLARIZATION; QUENCHING; SPECTROMETRY;

FLUORESCENCE;

CALF THYMUS DNA; DNA; FERROCYANIDE; METHYLENE BLUE;

ABSORPTION; ANIMAL; ARTICLE; CATTLE; CHEMISTRY; FLUORESCENCE POLARIZATION; METABOLISM; ULTRAVIOLET SPECTROPHOTOMETRY;

ABSORPTION; ANIMALS; CATTLE; DNA; FERROCYANIDES; FLUORESCENCE POLARIZATION; METHYLENE BLUE; SPECTROPHOTOMETRY, ULTRAVIOLET;

EID: 77951024636     PISSN: 10530509     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10895-009-0549-9     Document Type: Article

References (32)

1. H Junicke JR Hart J Kisko O Glebov IR Kirsch JK Barton 2003 A rhodium(III) complex for high-affinity DNA base-pair mismatch recognition Proc Natl Acad Sci USA 100 3737 3742 10.1073/pnas.0537194100 1:CAS:528: DC%2BD3sXivFSqsbw%3D 12610209 (Pubitemid 36418100)
2. SO Kelley G Orellana JK Barton 2000 Luminescence quenching by DNA-bound viologens: effect of reactant identity on efficiency and dynamics of electron transfer in DNA J Photochem Photobiol B 58 72 79 10.1016/S1011-1344(00)00106-8 1:CAS:528:DC%2BD3MXhtFart7s%3D (Pubitemid 32117872)
3. CV Kumar EH Asuncion 1993 DNA binding studies and site selective fluorescence sensitization of an anthryl probe J Am Chem Soc 115 8547 8553 10.1021/ja00072a004 1:CAS:528:DyaK3sXlsFCht7o%3D
4. MN Usacheva MC Teichert MA Biel 2003 The role of the methylene blue and toluidine blue monomers and dimmers in the photoinactivation of bacteria J Photochem Photobiol B 71 87 98 10.1016/j.jphotobiol.2003.06.002 1:CAS:528:DC%2BD3sXnvVyqtbk%3D 14705643 (Pubitemid 37258835)
5. K Orth G Beck F Genze A Ruck 2000 Methylene blue mediated photodynamic therapy in experimental colorectal tumors in mice J Photochem Photobiol B 57 186 192 10.1016/S1011-1344(00)00105-6 1:CAS:528:DC%2BD3cXosFekurg%3D 11154085
6. BS Fujimoto JB Clendenning JJ Delrow PJ Heath M Schurr 1994 Fluorescence and photobleaching studies of methyleneblue binding to DNA J Phys Chem 98 6633 6643 10.1021/j100077a033 1:CAS:528:DyaK2cXkt12qsbc%3D
7. R Rohs H Sklenar R Lavery B Roder 2000 Methylene blue binding to DNA with alternating GC base sequence: a modeling study J Am Chem Soc 122 2860 2866 10.1021/ja992966k 1:CAS:528:DC%2BD3cXhsFelt7o%3D (Pubitemid 30191046)
8. GC Zhao JJ Zhu HY Chen 1999 Spectroscopic studies of the interactive model of methylene blue with DNA by means of β-cyclodextrin Spectrochim Acta A 55 1109 1117 10.1016/S1386-1425(99)00002-5
9. GC Zhao JJ Zhu JJ Zhang HY Chen 1999 Voltammetric studies of the interaction of methylene blue with DNA by means of β-cyclodextrin Anal Chim Acta 394 337 344 10.1016/S0003-2670(99)00292-5 1:CAS:528:DyaK1MXksFWlu7c%3D (Pubitemid 29338947)
10. E Tuite B Norden 1994 Sequence-specific interactions of methylene blue with polynucleotides and DNA: a spectroscopic study J Am Chem Soc 116 7548 7556 10.1021/ja00096a011 1:CAS:528:DyaK2cXlt1yjtro%3D
11. C OhUigin DJ McConnell JM Kelley WJM Van der Putten 1987 Methylene blue photosensitised strand cleavage of DNA: effects of dye binding and oxygen Nucl Acids Res 15 7411 7427 10.1093/nar/15.18.7411 1:CAS:528:DyaL2sXmtFCiu7w%3D 2821508
12. Z Hu CL Tong 2007 Synchronous fluorescence determination of DNA based on the interaction between methylene blue and DNA Anal Chim Acta 587 187 193 10.1016/j.aca.2007.01.050 1:CAS:528:DC%2BD2sXislWltL0%3D 17386772 (Pubitemid 46356280)
13. EC Long JK Barton 1990 On demonstrating DNA intercalation Acc Chem Res 23 271 273 10.1021/ar00177a001 1:CAS:528:DyaK3cXlt1yisLw%3D
14. MR Eftink CA Ghiron 1981 Fluorescence quenching studies with proteins Anal Biochem 144 199 227 10.1016/0003-2697(81)90474-7
15. GH Xiang CL Tong HZ Lin 2007 Nitroaniline isomers interaction with bovine serum albumin and toxicological implications J Fluoresc 17 512 521 10.1007/s10895-007-0203-3 1:CAS:528:DC%2BD2sXpt1yksLc%3D 17623271 (Pubitemid 47310323)
16. WY Li JG Xu XW He 2000 Characterization of the binding of methylene blue to DNA by spectroscopic methods Anal Lett 33 2453 2464 10.1080/00032710008543201 1:CAS:528:DC%2BD3cXmsVWntr0%3D
17. JB Chaires N Dattagupta DM Crothers 1982 Studies on interaction of anthracycline antibiotics and deoxyribonucleic acid: equilibrium binding studies on the interaction of daunomycin with deoxyribonucleic acid Biochemistry 21 3933 3940 10.1021/bi00260a005 1:CAS:528:DyaL38Xks1Kjtbs%3D 7126524 (Pubitemid 13237187)
18. MK Irving LH Donald 1971 Properties of graphical representations of multiple classes of binding sites Biochemistry 10 3065 3069 10.1021/bi00792a013
19. A Thomas M Atreyi MVR Rao 1995 Interaction of methylene blue with transfer RNA-a spectroscopic study Chem-Biol Interact 97 199 214 10.1016/0009-2797(95)03616-T
20. CV Kumar RS Turner EH Asuncion 1993 Groove binding of a styrylcyanine dye to the DNA double helix: the salt effect J Photochem Photobiol A-Chem 74 231 238 10.1016/1010-6030(93)80121-O 1:CAS:528:DyaK3sXms1Gktr0%3D
21. CV Kumar EH Asuncion 1992 Sequence dependent energy transfer from DNA to a simple aromatic chromophore J Chem Soc Chem Commun 6 470 472 10.1039/c39920000470
22. LZ Zhang GQ Tang 2004 The binding properties of photosensitizer methylene blue to herring sperm DNA: a spectroscopic study J Photoch Photobio B 74 119 125 10.1016/j.jphotobiol.2004.03.005 1:CAS:528:DC%2BD2cXkt1alur0%3D (Pubitemid 38667453)
23. 3+ complex and DNA J Agric Food Chem 53 6207 6212 10.1021/jf050783d 1:CAS:528:DC%2BD2MXmt1KrsLY%3D 16076095 (Pubitemid 41169362)
24. M Dourlent C Helene 1971 A quantitative analysis of proflavine binding to polyadenylic acid, polyuridilic acid and transfer RNA Eur J Biochem 23 86 95 10.1111/j.1432-1033.1971.tb01595.x 1:CAS:528:DyaE38XlsVKqtQ%3D%3D 5127390
25. RW Armstrong T Kurucsev UP Strauss 1970 The interaction between acridine dyes and deoxyribonucleic acid J Am Chem Soc 92 3174 3181 10.1021/ja00713a041 1:CAS:528:DyaE3cXktlWmt7g%3D 5446957
26. M Asadi E Safaei B Ranjbarb L Hasanib 2004 Thermo-dynamic and spectroscopic study on the binding of cationic Zn(II) and Co(II) tetrapyridino-porphyrazines to calf thymus DNA: the role of the central metal in binding parameters New J Chem 28 1227 1234 10.1039/b404068f 1:CAS:528:DC%2BD2cXotVOnt7Y%3D (Pubitemid 39457456)
27. HJ Karlsson M Eriksson E Perzon B P Lincoln G Westman 2003 Groove-binding unsymmetrical cyanine dyes for staining of DNA: syntheses and characterization of the DNA-binding Nucl Acids Res 31 6227 6234 10.1093/nar/gkg821 1:CAS:528:DC%2BD3sXos1amsro%3D 14576310 (Pubitemid 37448499)
28. CF Cesarone C Bolognesi L Santi 1979 Improved microfluorometric DNA determination in biological material using 33258 Hoechst Anal Biochem 100 188 197 10.1016/0003-2697(79)90131-3 1:CAS:528:DyaL3cXlsVGgsw%3D%3D 94515 (Pubitemid 10157650)
29. QX Zhen BH Ye JG Liu LN Ji L Wang 1999 Synthesis of ruthenium polypyridyl complexes and the steric influence of the intercalated ligand on DNA-binding Chem J Chinese Univ 20 1661 1666 1:CAS:528:DyaK1MXns1SjsL0%3D
30. K Bergmann CT O'Konski 1963 A spectroscopic study of methylene blue monomer, dimer and complexes with montmorillonitrile J Phys Chem 67 2169 2177 10.1021/j100804a048 1:CAS:528:DyaF3sXks1Kitbk%3D
31. SJ Atherton A Harriman 1993 Photochemistry of intercalated methylene blue: photoinduced hydrogen atom abstraction from guanine and adenine J Am Chem Soc 115 1816 1822 10.1021/ja00058a028 1:CAS:528:DyaK3sXhs1Cht74%3D
32. GS Beddard JM Kelly WJM VanderPutten 1990 Picosecond study of the luminescence and transient absorption of methylene blue-polynucleotide complexes J Chem Soc Chem Commun 19 1346 1347 10.1039/c39900001346