Validation of a partial rpoB gene sequence as a tool for phylogenetic identification of aeromonads isolated from environmental sources

Canadian Journal of Microbiology

Volumn 56, Issue 3, 2010, Pages 217-228

  Lamy, Brigitte ^a,b   Laurent, Fréderic ^b,c   Kodjo, Angeli ^b,d  

^a Centre Hospitalier du Bassin de Thau   (France)

^b Groupe Français d'Étude Sur Les Aeromonas GFA   (France)

^c CROIX ROUSSE HOSPITAL   (France)

^d UNIVERSITÉ DE LYON   (France)

Author keywords

Aeromonas; Environment; Phylogenetic identification; rpoB gene

Indexed keywords

16S RDNA; 16S RDNA SEQUENCE; AEROMONAS; AEROMONAS HYDROPHILA; ENVIRONMENTAL ISOLATES; GENE ANALYSIS; GENE SEQUENCES; HYDROPHILA; PARTIAL SEQUENCES;

STRAIN;

GENES;

DNA 16S; RNA POLYMERASE BETA SUBUNIT;

BACTERIUM; DATABASE; GENE; GENETIC ANALYSIS; NUCLEIC ACID; PHENOTYPE; PHYLOGENETICS; POLYMORPHISM; SNAIL;

AEROMONAS; AEROMONAS AQUARIORUM; AEROMONAS HYDROPHILA; AEROMONAS MOLLUSCORUM; AEROMONAS PUNCTATA; AEROMONAS SHARMANA; ARTICLE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; ENVIRONMENTAL FACTOR; GENE; GENE AMPLIFICATION; GENE CLUSTER; GENE SEQUENCE; GENETIC DATABASE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SEQUENCE ALIGNMENT; SNAIL; VALIDATION STUDY;

AEROMONAS; BACTERIAL PROTEINS; BACTERIAL TYPING TECHNIQUES; ENVIRONMENTAL MICROBIOLOGY; GENOTYPE; MOLECULAR SEQUENCE DATA; PHENOTYPE; PHYLOGENY; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; REPRODUCIBILITY OF RESULTS; RNA, RIBOSOMAL, 16S;

AEROMONAS; AEROMONAS HYDROPHILA; AEROMONAS MOLLUSCORUM; AEROMONAS PUNCTATA; GASTROPODA;

EID: 77950661640     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/W10-006     Document Type: Article

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