ChpR is a chlorpyrifos-responsive transcription regulator in Sinorhizobium meliloti

Journal of Molecular Microbiology and Biotechnology

Volumn 18, Issue 3, 2010, Pages 141-147

  Whangsuk, Wirongrong ^a   Dubbs, James M ^a   Sallabhan, Ratiboot ^a   Somsongkul, Kumpanart ^b   Mongkolsuk, Skorn ^a,b,c   Loprasert, Suvit ^a,c,d  

^a Chulabhorn Research Institute   (Thailand)

^b MAHIDOL UNIVERSITY   (Thailand)

^c Center of Excellence on Environmental Health   (Thailand)

^d Toxicology and Management of Chemicals   (Thailand)

Author keywords

Biosensor; Insecticide responsive promoter; Pesticide; Transcription activator

Indexed keywords

BACTERIAL DNA; BACTERIAL PROTEIN; BACTERIAL RNA; CHLORPYRIFOS; DIMPYLATE; ETHION; GENOMIC DNA; MESSENGER RNA; ORGANOPHOSPHATE INSECTICIDE; SPACER DNA; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR CHPR; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL GENE; BINDING SITE; CHEMICAL STRUCTURE; CHPA GENE; CHPR GENE; GEL MOBILITY SHIFT ASSAY; GENE EXPRESSION; GENE FUNCTION; GENE INDUCTION; GENE LOCUS; MOLECULAR CLONING; NONHUMAN; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE; PLASMID; PROMOTER REGION; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; SEQUENCE ALIGNMENT; SINORHIZOBIUM MELILOTI; TRANSCRIPTION INITIATION; TRANSCRIPTION REGULATION;

BACTERIAL PROTEINS; BASE SEQUENCE; BINDING SITES; CHLORPYRIFOS; CLONING, MOLECULAR; DIAZINON; ESCHERICHIA COLI; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; ORGANOTHIOPHOSPHORUS COMPOUNDS; PLASMIDS; PROMOTER REGIONS, GENETIC; PROTEIN BINDING; SEQUENCE ALIGNMENT; SINORHIZOBIUM MELILOTI; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; SINORHIZOBIUM MELILOTI;

EID: 77950625467     PISSN: 14641801     EISSN: None     Source Type: Journal    
DOI: 10.1159/000308514     Document Type: Article

References (23)

1. Alexeyev MF: The pKNOCK series of broadhost-range mobilizable suicide vectors for gene knockout and targeted DNA insertion into the chromosome of gram-negative bacteria. Biotechniques 1999; 26: 824-828.
2. Barron MG, Woodburn KB: Ecotoxicology of chlorpyrifos. Rev Environ Contam Toxicol 1995; 144: 1-93.
3. Belkin S: Microbial whole-cell sensing systems of environmental pollutants. Curr Opin Microbiol 2003; 6: 206-212.
4. Crooks GE, Hon G, Chandonia JM, Brenner SE: Weblogo: A sequence logo generator. Genome Res 2004; 14: 1188-1190.
5. Curwin BD, Hein MJ, Barr DB, Striley C: Comparison of immunoassay and HPLC-MS/MS used to measure urinary metabolites of atrazine, metolachlor, and chlorpyrifos from farmers and nonfarmers in Iowa. J Expo Sci Environ Epidemiol DOI:10.1038/jes.2009.15.
6. Das AK, Cohen PW, Barford D: The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998; 17: 1192-1199.
7. de Lorenzo V, Herrero M, Jakubzik U, Timmis KN: Mini-tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria. J Bacteriol 1990; 172: 6568-6572.
8. Dunwell JM, Purvis A, Khuri S: Cupins: the most functionally diverse protein superfamily? Phytochemistry 2004; 65: 7-17.
9. Fillion J, Sauvé F, Selwyn J: Multiresidue method for the determination of residues of 251 pesticides in fruits and vegetables by gas chromatography/ mass spectrometry and liquid chromatography with fluorescence detection. J AOAC Int 2000; 83: 698-713.
10. Finan TM, Weidner S, Wong K, Buhrmester J, Chain P, Vorholter FJ, Hernandez-Lucas I, Becker A, Cowie A, Gouzy J, Golding B, Puhler A: The complete sequence of the 1,683-kb pSymB megaplasmid from the N 2-fixing endosymbiont Sinorhizobium meliloti. Proc Natl Acad Sci USA 2001; 98: 9889-9894.
11. Glazebrook J, Walker GC: Genetic techniques in Rhizobium meliloti. Methods Enzymol 1991;204:398-418.
12. Hay AG, Rice JF, Applegate BM, Bright NG, Sayler GS: A bioluminescent whole-cell reporter for detection of 2,4-dichlorophenoxyacetic acid and 2,4-dichlorophenol in soil. Appl Environ Microbiol 2000; 66: 4589-4594.
13. Jaggi S, Sood C, Kumar V, Ravindranath SD, Shanker A: Leaching of pesticides in tea brew. J Agric Food Chem 2001; 49: 5479-5483.
14. Klotz WL, Schure MR, Foley JP: Determination of octanol-water partition coefficients of pesticides by microemulsion electrokinetic chromatography. J Chromatogr A 2001; 930: 145-154.
15. Kovach ME, Elzer PH, Hill DS, Robertson GT, Farris MA, Roop RM 2nd, Peterson KM: Four new derivatives of the broad-hostrange cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 1995; 166: 175-176.
16. Loprasert S, Sallabhan R, Whangsuk W, Mongkolsuk S: Characterization and mutagenesis of fur gene from Burkholderia pseudomallei. Gene 2000;254:129-137.
17. Loprasert S, Whangsuk W, Dubbs JM, Sallabhan R, Somsongkul K, Mongkolsuk S: HpdR is a transcriptional activator of Sinorhizobium meliloti hpdA , which encodes a herbicidetargeted 4-hydroxyphenylpyruvate dioxygenase. J Bacteriol 2007; 189: 3660-3664.
18. MacLellan SR, MacLean AM, Finan TM: Promoter prediction in the Rhizobia. Microbiology 2006; 152: 1751-1763.
19. Mongkolsuk S, Loprasert S, Vattanaviboon P, Chanvanichayachai C, Chamnongpol S, Supsamran N: Heterologous growth phaseand temperature-dependent expression and H2O2 toxicity protection of a superoxide-inducible monofunctional catalase gene from Xanthomonas oryzae pv. oryzae. J Bacteriol 1996;178:3578-3584.
20. Pohlmann A, Fricke WF, Reinecke F, Kusian B, Liesegang H, Cramm R, Eitinger T, Ewering C, Potter M, Schwartz E, Strittmatter A, Voss I, Gottschalk G, Steinbuchel A, Friedrich B, Bowien B: Genome sequence of the bioplastic-producing 'Knallgas' Bacterium Ralstonia eutropha H16. Nat Biotechnol 2006; 24: 1257-1262.
21. Shao CY, Howe CJ, Porter AJ, Glover LA: Novel cyanobacterial biosensor for detection of herbicides. Appl Environ Microbiol 2002; 68: 5026-5033.
22. Spaink HP, Okker RJH, Wijffelmann CA, Pees E, Lugtemberg BJJ: Promoter in the nodulation region of the Rhizobium leguminosarum sym plasmid pRL1JI. Plant Mol Biol 1987; 9: 27-39.
23. Stammers DK, Ren J, Leslie K, Nichols CE, Lamb HK, Cocklin S, Dodds A, Hawkins AR: The structure of the negative transcriptional regulator NmrA reveals a structural superfamily which includes the short-chain dehydrogenase/ reductases. EMBO J 2001; 20: 6619-6626.