Loktanella pyoseonensis sp. nov., isolated from beach sand, and emended description of the genus Loktanella

International Journal of Systematic and Evolutionary Microbiology

Volumn 60, Issue 4, 2010, Pages 785-789

  Moon, Young Gun ^a   Seo, Seong Hae ^a   Lee, Soon Dong ^a   Heo, Moon Soo ^a  

^a Jeju National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; RNA 16S;

AEROBIC BACTERIUM; ARTICLE; BACTERIAL CELL; BACTERIAL GROWTH; BACTERIUM ISOLATION; CELL MOTILITY; DNA DNA HYBRIDIZATION; GENE SEQUENCE; HALOPHILIC BACTERIUM; LOKTANELLA PYOSEONENSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; SAND;

BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; DNA, RIBOSOMAL; FATTY ACIDS; GENES, RRNA; MOLECULAR SEQUENCE DATA; PHENOTYPE; PHYLOGENY; REPUBLIC OF KOREA; RHODOBACTERACEAE; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY; SPECIES SPECIFICITY;

ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); LOKTANELLA; LOKTANELLA HONGKONGENSIS;

EID: 77950623789     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.011072-0     Document Type: Article

References (18)

1. Baumann, P. & Baumann, L. (1981). The marine gram-negative eubacteria: genera Photobacterium, Beneckea, Alteromonas, Pseudomonas, and Alcaligenes. In The Prokaryotes, vol. 1, pp. 1302-1331. Edited by M. P. Starr, H. Stolp, H. G. Trüper, A. Balows & H. Schlegel. Berlin: Springer.
2. Bowman, J. P. (2000). Description of Cellulophaga algicola sp. nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov. Int J Syst Evol Microbiol 50, 1861-1868.
3. Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
4. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
5. Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
6. Hosoya, S. & Yokota, A. (2007). Loktanella atrilutea sp. nov., isolated from seawater in Japan. Int J Syst Evol Microbiol 57, 1966-1969. (Pubitemid 47497129)
7. Ivanova, E. P., Zhukova, N. V., Lysenko, A. M., Gorshkova, N. M., Sergeev, A. F., Mikhailov, V. V. & Bowman, J. P. (2005). Loktanella agnita sp. nov. and Loktanella rosea sp. nov., from the north-west Pacific Ocean. Int J Syst Evol Microbiol 55, 2203-2207.
8. Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
9. Lányí, B. (1985). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 18, 1-67.
10. Lau, S. C. K., Tsoi, M. M. Y., Li, X., Plakhotnikova, I., Wu, M., Wong, P.-K. & Qian, P.-Y. (2004). Loktanella hongkongensis sp. nov., a novel member of the α-Proteobacteria originating from marine biofilms in Hong Kong waters. Int J Syst Evol Microbiol 54, 2281-2284.
11. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
12. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
13. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characteristics. In Methods for General and Molecular Biology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington: American Society for Microbiology.
14. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
15. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
16. Van Trappen, S., Mergaert, J. & Swings, J. (2004). Loktanella salsilacus gen. nov., sp. nov., Loktanella fryxellensis sp. nov. and Loktanella vestfoldensis sp. nov., new members of the Rhodobacter group, isolated from microbial mats in Antarctic lakes. Int J Syst Evol Microbiol 54, 1263-1269.
17. Weon, H.-Y., Kim, B.-Y., Yoo, S.-H., Kim, J.-S., Kwon, S.-W., Go, S.-J. & Stackebrandt, E. (2006). Loktanella koreensis sp. nov., isolated from sea sand in Korea. Int J Syst Evol Microbiol 56, 2199-2202. (Pubitemid 44446404)
18. Yoon, J.-H., Kang, S.-J., Lee, S.-Y. & Oh, T.-K. (2007). Loktanella maricola sp. nov., isolated from seawater of the East Sea in Korea. Int J Syst Evol Microbiol 57, 1799-1802.