메뉴 건너뛰기




Volumn 60, Issue 4, 2010, Pages 834-839

Thermus arciformis sp. nov., a thermophilic species from a geothermal area

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL RNA; RNA 16S;

EID: 77950618404     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.007690-0     Document Type: Article
Times cited : (38)

References (29)
  • 1
    • 0014501198 scopus 로고
    • Thermus aquaticus gen. n. and sp. n., a nonsporulating extreme thermophile
    • Brock, T. D. & Freeze, H. (1969). Thermus aquaticus gen. n. and sp. n., a nonsporulating extreme thermophile. J Bacteriol 98, 289-297.
    • (1969) J. Bacteriol. , vol.98 , pp. 289-297
    • Brock, T.D.1    Freeze, H.2
  • 2
    • 1842362290 scopus 로고
    • Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli
    • Brosius, J., Palmer, M. L., Kennedy, P. J. & Noller, H. F. (1978). Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci U S A 75, 4801-4805.
    • (1978) Proc. Natl. Acad. Sci. U S A , vol.75 , pp. 4801-4805
    • Brosius, J.1    Palmer, M.L.2    Kennedy, P.J.3    Noller, H.F.4
  • 3
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun, J., Lee, J. H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
    • (2007) Int. J. Syst. Evol. Microbiol. , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.W.7
  • 4
    • 0030870935 scopus 로고    scopus 로고
    • Meiothermus cerbereus sp. nov., a new slightly thermophilic species with high levels of 3-hydroxy fatty acids
    • Chung, A. P., Rainey, F., Nobre, M. F., Burghardt, J. & da Costa, M. S. (1997). Meiothermus cerbereus sp. nov., a new slightly thermophilic species with high levels of 3-hydroxy fatty acids. Int J Syst Bacteriol 47, 1225-1230.
    • (1997) Int. J. Syst. Bacteriol. , vol.47 , pp. 1225-1230
    • Chung, A.P.1    Rainey, F.2    Nobre, M.F.3    Burghardt, J.4    Da Costa, M.S.5
  • 6
    • 0000072529 scopus 로고    scopus 로고
    • Genus I. Thermus
    • 2001 , In, 2nd edn, Edited by D. R. Boone, R. W. Castenholtz & G. M. Garrity. New York: Springer
    • da Costa, M. S., Nobre, M. F. & Rainey, F. A. (2001). Genus I. Thermus. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 1, pp. 404-414. Edited by D. R. Boone, R. W. Castenholtz & G. M. Garrity. New York: Springer.
    • Bergey's Manual of Systematic Bacteriology , vol.1 , pp. 404-414
    • Da Costa, M.S.1    Nobre, M.F.2    Rainey, F.A.3
  • 7
    • 37249049226 scopus 로고    scopus 로고
    • The genus Thermus and relatives
    • In, 3rd edn, Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer
    • da Costa, M. S., Rainey, F. A. & Nobre, M. F. (2006). The genus Thermus and relatives. In The Prokaryotes, 3rd edn, vol. 7, pp. 797-812. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
    • (2006) The Prokaryotes , vol.7 , pp. 797-812
    • Da Costa, M.S.1    Rainey, F.A.2    Nobre, M.F.3
  • 8
    • 0014713693 scopus 로고
    • The quantitative measurement of DNA hybridization from renaturation rates
    • De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
    • (1970) Eur. J. Biochem. , vol.12 , pp. 133-142
    • De Ley, J.1    Cattoir, H.2    Reynaerts, A.3
  • 9
    • 0003437299 scopus 로고
    • version 3.5.1. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA
    • Felsenstein, J. (1993). PHYLIP (phylogenetic inference package) version 3.5.1. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
    • (1993) PHYLIP (phylogenetic Inference package)
    • Felsenstein, J.1
  • 11
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst. Zool. , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 12
    • 0022624153 scopus 로고
    • A numerical classification of some Thermus isolates
    • Hudson, J. A., Morgan, H. W. & Daniel, R. M. (1986). A numerical classification of some Thermus isolates. J Gen Microbiol 132, 531-540.
    • (1986) J. Gen. Microbiol. , vol.132 , pp. 531-540
    • Hudson, J.A.1    Morgan, H.W.2    Daniel, R.M.3
  • 13
    • 0023575491 scopus 로고
    • Thermus filiformis sp. nov., a filamentous caldoactive bacterium
    • Hudson, J. A., Morgan, H. W. & Daniel, R. M. (1987). Thermus filiformis sp. nov., a filamentous caldoactive bacterium. Int J Syst Bacteriol 37, 431-436.
    • (1987) Int. J. Syst. Bacteriol. , vol.37 , pp. 431-436
    • Hudson, J.A.1    Morgan, H.W.2    Daniel, R.M.3
  • 14
    • 0020549589 scopus 로고
    • Studies on the spectrophotometric determination of DNA hybridization from renaturation rates
    • Huß, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
    • (1983) Syst. Appl. Microbiol. , vol.4 , pp. 184-192
    • Huß, V.A.R.1    Festl, H.2    Schleifer, K.H.3
  • 15
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • In, Edited by H. N. Munro. New York: Academic Press
    • Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
    • (1969) Mammalian Protein Metabolism , vol.3 , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 16
    • 0028287844 scopus 로고
    • Thermus scotoductus, sp. nov., a pigmentproducing thermophilic bacterium from hot tap water in Iceland and including Thermus sp. X-1
    • Kristjansson, J. K., Hjörleifsdottir, S., Marteinsson, V. T. & Alfredsson, G. A. (1994). Thermus scotoductus, sp. nov., a pigmentproducing thermophilic bacterium from hot tap water in Iceland and including Thermus sp. X-1. Syst Appl Microbiol 17, 44-50.
    • (1994) Syst. Appl. Microbiol. , vol.17 , pp. 44-50
    • Kristjansson, J.K.1    Hjörleifsdottir, S.2    Marteinsson, V.T.3    Alfredsson, G.A.4
  • 17
    • 0023752959 scopus 로고
    • Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum
    • Kuykendall, L. D., Roy, M. A., O'Neill, J. J. & Devine, T. E. (1988). Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum. Int J Syst Bacteriol 38, 358-361.
    • (1988) Int. J. Syst. Bacteriol. , vol.38 , pp. 358-361
    • Kuykendall, L.D.1    Roy, M.A.2    O'Neill, J.J.3    Devine, T.E.4
  • 18
    • 0026076503 scopus 로고
    • Characterization of halotolerant Thermus isolates from shallow marine hot springs on S. Miquel, Azores
    • Manaia, C. M. & da Costa, M. S. (1991). Characterization of halotolerant Thermus isolates from shallow marine hot springs on S. Miquel, Azores. J Gen Microbiol 137, 2643-2648.
    • (1991) J. Gen. Microbiol. , vol.137 , pp. 2643-2648
    • Manaia, C.M.1    Da Costa, M.S.2
  • 19
    • 0028923953 scopus 로고
    • Halotolerant Thermus strains from marine and terrestrial hot springs belong to Thermus thermophilus (ex Oshima and Imahori, 1974) nom. rev. emend
    • Manaia, C. M., Hoste, B., Gutierrez, M. C., Gillis, M., Ventosa, A., Kersters, K. & da Costa, M. S. (1995). Halotolerant Thermus strains from marine and terrestrial hot springs belong to Thermus thermophilus (ex Oshima and Imahori, 1974) nom. rev. emend. Syst Appl Microbiol 17, 526-532.
    • (1995) Syst. Appl. Microbiol. , vol.17 , pp. 526-532
    • Manaia, C.M.1    Hoste, B.2    Gutierrez, M.C.3    Gillis, M.4    Ventosa, A.5    Kersters, K.6    Da Costa, M.S.7
  • 20
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int. J. Syst. Bacteriol. , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 21
    • 0015955554 scopus 로고
    • Description of Thermus thermophilus (Yoshida and Oshima) comb. nov., a nonsporulating thermophilic bacterium from a Japanese thermal spa
    • Oshima, T. & Imahori, K. (1974). Description of Thermus thermophilus (Yoshida and Oshima) comb. nov., a nonsporulating thermophilic bacterium from a Japanese thermal spa. Int J Syst Bacteriol 24, 102-112.
    • (1974) Int. J. Syst. Bacteriol. , vol.24 , pp. 102-112
    • Oshima, T.1    Imahori, K.2
  • 22
    • 0029799968 scopus 로고    scopus 로고
    • The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: Proposal of Nocardiopsaceae fam. nov.
    • Rainey, F. A., Ward-Rainey, N., Kroppenstedt, R. M. & Stackebrandt, E. (1996). The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int J Syst Bacteriol 46, 1088-1092.
    • (1996) Int. J. Syst. Bacteriol. , vol.46 , pp. 1088-1092
    • Rainey, F.A.1    Ward-Rainey, N.2    Kroppenstedt, R.M.3    Stackebrandt, E.4
  • 23
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 24
    • 0024817092 scopus 로고
    • Numerical taxonomy of Thermus isolates from hot springs in Portugal
    • Santos, M. A., Williams, R. A. D. & da Costa, M. S. (1989). Numerical taxonomy of Thermus isolates from hot springs in Portugal. Syst Appl Microbiol 12, 310-315.
    • (1989) Syst. Appl. Microbiol. , vol.12 , pp. 310-315
    • Santos, M.A.1    Williams, R.A.D.2    Da Costa, M.S.3
  • 25
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 26
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 27
    • 0000071941 scopus 로고
    • Fully saturated menaquinones in the archaebacterium Pyrobaculum islandicum
    • Tindall, B. J. (1989). Fully saturated menaquinones in the archaebacterium Pyrobaculum islandicum. FEMS Microbiol Lett 60, 251-254.
    • (1989) FEMS Microbiol. Lett. , vol.60 , pp. 251-254
    • Tindall, B.J.1
  • 28
    • 0029052056 scopus 로고
    • DNA relatedness of Thermus strains, description of Thermus brockianus sp. nov., and proposal to reestablish Thermus thermophilus (Oshima and Imahori)
    • Williams, R. A. D., Smith, K. E., Welch, S. G., Micallef, J. & Sharp, R. J. (1995). DNA relatedness of Thermus strains, description of Thermus brockianus sp. nov., and proposal to reestablish Thermus thermophilus (Oshima and Imahori). Int J Syst Bacteriol 45, 495-499.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 495-499
    • Williams, R.A.D.1    Smith, K.E.2    Welch, S.G.3    Micallef, J.4    Sharp, R.J.5
  • 29
    • 0030008250 scopus 로고    scopus 로고
    • Thermus oshimai sp. nov., isolated from hot springs in Portugal, Iceland, and the Azores, and comment on the concept of a limited geographical distribution of Thermus species
    • Williams, R. A. D., Smith, K. E., Welch, S. G. & Micallef, J. (1996). Thermus oshimai sp. nov., isolated from hot springs in Portugal, Iceland, and the Azores, and comment on the concept of a limited geographical distribution of Thermus species. Int J Syst Bacteriol 46, 403-408.
    • (1996) Int. J. Syst. Bacteriol. , vol.46 , pp. 403-408
    • Williams, R.A.D.1    Smith, K.E.2    Welch, S.G.3    Micallef, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.