-
1
-
-
13644267721
-
Solution structure of the biologically relevant G-quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization
-
DOI 10.1021/bi048242p
-
Ambrus A, Chen D, Dai J, Jones RA, Yang D (2005) Solution structure of the biologically relevant G-quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization. Biochemistry 44:2048-2058. doi:10.1021/bi048242p (Pubitemid 40227475)
-
(2005)
Biochemistry
, vol.44
, Issue.6
, pp. 2048-2058
-
-
Ambrus, A.1
Chen, D.2
Dai, J.3
Jones, R.A.4
Yang, D.5
-
2
-
-
33646943863
-
Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution
-
DOI 10.1093/nar/gkl348
-
Ambrus A, Chen D, Dai J, Bialis T, Jones RA, Yang D (2006) Human telomeric sequence forms a hybrid-type intramolecular Gquadruplex structure with mixed parallel/antiparallel strands in potassium solution. Nucleic Acids Res 34:2723-2735. doi: 10.1093/nar/gkl348 (Pubitemid 43985634)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.9
, pp. 2723-2735
-
-
Ambrus, A.1
Chen, D.2
Dai, J.3
Bialis, T.4
Jones, R.A.5
Yang, D.6
-
3
-
-
0030751844
-
Comparison of the electrophoretic and hydrodynamic properties of DNA and RNA oligonucleotides duplexes
-
doi 10.1016/S0006-3495(97)78185-2
-
Bonifacio GF, Brown T, Conn GL, Lane AN (1997) Comparison of the electrophoretic and hydrodynamic properties of DNA and RNA oligonucleotides duplexes. Biophys J 73:1532-1538. doi: 10.1016/S0006-3495(97)78185-2
-
(1997)
Biophys J
, vol.73
, pp. 1532-1538
-
-
Bonifacio, G.F.1
Brown, T.2
Conn, G.L.3
Lane, A.N.4
-
4
-
-
33751020853
-
Quadruplex DNA: Sequence, topology and structure
-
DOI 10.1093/nar/gkl655
-
Burge S, Parkinson GN, Hazel P, Todd AK, Neidle S (2006) Quadruplex DNA: sequence, topology and structure. Nucleic Acids Res 34:5402-5412. doi:10.1093/nar/gkl655 (Pubitemid 44742430)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.19
, pp. 5402-5415
-
-
Burge, S.1
Parkinson, G.N.2
Hazel, P.3
Todd, A.K.4
Neidle, S.5
-
5
-
-
84984085423
-
Volume changes accompanying the thermal denaturation of deoxyribonucleic acid I. Denaturation at neutral pH
-
doi 10.1002/bip.1969.360070410
-
Chapman RE Jr, Sturtevant JM (1969) Volume changes accompanying the thermal denaturation of deoxyribonucleic acid I. Denaturation at neutral pH. Biopolymers 7:527-537. doi:10. 1002/bip.1969.360070410
-
(1969)
Biopolymers
, vol.7
, pp. 527-537
-
-
Chapman Jr., R.E.1
Sturtevant, J.M.2
-
6
-
-
0014231119
-
Deoxyribonucleate solutions: Sedimentation in a density gradient, partial specific volumes, density and refractive index increments, and preferential interactions
-
doi 10.1002/bip.1968.360060805
-
Cohen G, Eisenberg H (1968) Deoxyribonucleate solutions: sedimentation in a density gradient, partial specific volumes, density and refractive index increments, and preferential interactions. Biopolymers 6:1077-1100. doi:10.1002/bip.1968.360060805
-
(1968)
Biopolymers
, vol.6
, pp. 1077-1100
-
-
Cohen, G.1
Eisenberg, H.2
-
7
-
-
0021107965
-
Solvent-accessible surfaces of proteins and nucleic acids
-
doi 10.1126/science.6879 170
-
Connolly ML (1983) Solvent-accessible surfaces of proteins and nucleic acids. Science 221:709-713. doi:10.1126/science.6879 170
-
(1983)
Science
, vol.221
, pp. 709-713
-
-
Connolly, M.L.1
-
8
-
-
0002258696
-
Specific volumes of biological macromolecules and some other molecules of biological interest
-
Hinz H-J (ed), chapter 3. Springer, New York
-
Durchschlag H (1986) Specific volumes of biological macromolecules and some other molecules of biological interest. In: Hinz H-J (ed) Thermodynamic data for biochemistry and biotechnology, chapter 3. Springer, New York, pp 45-128
-
(1986)
Thermodynamic Data for Biochemistry and Biotechnology
, pp. 45-128
-
-
Durchschlag, H.1
-
9
-
-
0013623497
-
Determination of the partial specific volume of conjugated proteins
-
doi 10.1007/BF01496937
-
Durchschlag H (1989) Determination of the partial specific volume of conjugated proteins. Colloid Polym Sci 267:1139-1150. doi: 10.1007/BF01496937
-
(1989)
Colloid Polym Sci
, vol.267
, pp. 1139-1150
-
-
Durchschlag, H.1
-
10
-
-
0034035899
-
Probing protein-sugar interactions
-
doi 10.1016/S0006-3495(00)76601-X
-
Ebel C, Eisenberg H, Ghirlando R (2000) Probing protein-sugar interactions. Biophys J 78:385-393. doi:10.1016/S0006-3495(00)76601-X
-
(2000)
Biophys J
, vol.78
, pp. 385-393
-
-
Ebel, C.1
Eisenberg, H.2
Ghirlando, R.3
-
11
-
-
0014216034
-
The simultaneous determination of partial specific volumes and molecular weights with microgram quantities
-
Edelstein SJ, Schachman HK (1967) The simultaneous determination of partial specific volumes and molecular weights with microgram quantities. J Biol Chem 242:306-311
-
(1967)
J Biol Chem
, vol.242
, pp. 306-311
-
-
Edelstein, S.J.1
Schachman, H.K.2
-
12
-
-
0015826193
-
Measurement of partial specific volume by sedimentation equilibrium in H2O-D2O solutions
-
doi 10.1016/S0076-6879(73)27006-4
-
Edelstein SJ, Schachman HK (1973) Measurement of partial specific volume by sedimentation equilibrium in H2O-D2O solutions. Methods Enzymol 27:82-98. doi:10.1016/S0076-6879(73)27006-4
-
(1973)
Methods Enzymol
, vol.27
, pp. 82-98
-
-
Edelstein, S.J.1
Schachman, H.K.2
-
13
-
-
85042639894
-
Helix formation by guanylic acid
-
doi 10.1073/pnas.48.12.2013
-
Gellert M, Lipsett MN, Davies DR (1962) Helix formation by guanylic acid. Proc Natl Acad Sci USA 48:2013-2018. doi: 10.1073/pnas.48.12.2013
-
(1962)
Proc Natl Acad Sci USA
, vol.48
, pp. 2013-2018
-
-
Gellert, M.1
Lipsett, M.N.2
Davies, D.R.3
-
14
-
-
0022402513
-
Identification of a specific telomere terminal transferase activity in Tetrahymena extracts
-
doi 10.1016/0092-8674(85)90170-9
-
Greider CW, Blackburn EH (1985) Identification of a specific telomere terminal transferase activity in Tetrahymena extracts. Cell 43:405-413. doi:10.1016/0092-8674(85)90170-9
-
(1985)
Cell
, vol.43
, pp. 405-413
-
-
Greider, C.W.1
Blackburn, E.H.2
-
15
-
-
0034955867
-
Sedimentation analysis of novel DNA structures formed by homo-oligonucleotides
-
doi 10.1016/S0006-3495(01)75706-2
-
Hatters DM, Wilson L, Atcliffe BW, Mulhern TD, Guzzo-Pernell N, Howlett GJ (2001) Sedimentation analysis of novel DNA structures formed by homo-oligonucleotides. Biophys J 81:371-381. doi:10.1016/S0006-3495(01)75706-2
-
(2001)
Biophys J
, vol.81
, pp. 371-381
-
-
Hatters, D.M.1
Wilson, L.2
Atcliffe, B.W.3
Mulhern, T.D.4
Guzzo-Pernell, N.5
Howlett, G.J.6
-
16
-
-
0023663911
-
Telomeric DNA oligonucleotides form novel intramolecular structures containing guanine-guanine base pairs
-
doi 10.1016/0092-8674(87)90577-0
-
Henderson E, Hardin CC, Walk SK, Tinoco I, Blackburn EH (1987) Telomeric DNA oligonucleotides form novel intramolecular structures containing guanine-guanine base pairs. Cell 51:899-908. doi:10.1016/0092-8674(87)90577-0
-
(1987)
Cell
, vol.51
, pp. 899-908
-
-
Henderson, E.1
Hardin, C.C.2
Walk, S.K.3
Tinoco, I.4
Blackburn, E.H.5
-
17
-
-
0026591751
-
Crystal structure of four-stranded Oxytricha telomeric DNA
-
doi 10.1038/356126a0
-
Kang C, Zhang X, Ratliff R, Moyzis R, Rich A (1992) Crystal structure of four-stranded Oxytricha telomeric DNA. Nature 356:126-131. doi:10.1038/356126a0
-
(1992)
Nature
, vol.356
, pp. 126-131
-
-
Kang, C.1
Zhang, X.2
Ratliff, R.3
Moyzis, R.4
Rich, A.5
-
18
-
-
55249109574
-
Stability and kinetics of G-quadruplex structures
-
doi 10.1093/nar/gkn517
-
Lane AN, Chaires JB, Gray RD, Trent JO (2008) Stability and kinetics of G-quadruplex structures. Nucleic Acids Res 36:5482-5515. doi:10.1093/nar/gkn517
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 5482-5515
-
-
Lane, A.N.1
Chaires, J.B.2
Gray, R.D.3
Trent, J.O.4
-
19
-
-
0029118618
-
Sedimentation equilibrium as thermodynamic tool
-
doi 10.1016/0076-6879(95)59055-2
-
Laue TM (1995) Sedimentation equilibrium as thermodynamic tool. Methods Enzymol 259:427-452. doi:10.1016/0076-6879(95)59055-2
-
(1995)
Methods Enzymol
, vol.259
, pp. 427-452
-
-
Laue, T.M.1
-
20
-
-
0002498995
-
Computeraided interpretation of analytical sedimentation data for proteins
-
Harding SE, Rowe AJ, Harding JC (eds), The Royal Society of Chemistry, Cambridge, England
-
Laue TM, Shah BD, Ridgeway TM, Pelletier SL (1992) Computeraided interpretation of analytical sedimentation data for proteins. In: Harding SE, Rowe AJ, Harding JC (eds) Analytical ultracentrifugation in biochemistry and polymer science. The Royal Society of Chemistry, Cambridge, England, pp 90-125
-
(1992)
Analytical Ultracentrifugation in Biochemistry and Polymer Science
, pp. 90-125
-
-
Laue, T.M.1
Shah, B.D.2
Ridgeway, T.M.3
Pelletier, S.L.4
-
21
-
-
0018400776
-
Measurements of preferential solvent interactions by densimetric techniques
-
doi 10.1016/0076-6879(79)61005-4
-
Lee JC, Gekko K, Timasheff SN (1979) Measurements of preferential solvent interactions by densimetric techniques. Methods Enzymol 61:26-49. doi:10.1016/0076-6879(79)61005-4
-
(1979)
Methods Enzymol
, vol.61
, pp. 26-49
-
-
Lee, J.C.1
Gekko, K.2
Timasheff, S.N.3
-
22
-
-
23844438712
-
Not so crystal clear: The structure of the human telomere G-quadruplex in solution differs from that present in a crystal
-
DOI 10.1093/nar/gki782
-
Li J, Correia JJ, Wang L, Trent JO, Chaires JB (2005) Not so crystal clear: the structure of the human telomere G-quadruplex in solution differs from that present in a crystal. Nucleic Acids Res 33:4649-4659. doi:10.1093/nar/ gki782 (Pubitemid 41222579)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.14
, pp. 4649-4659
-
-
Li, J.1
Correia, J.J.2
Wang, L.3
Trent, J.O.4
Chaires, J.B.5
-
23
-
-
0017895903
-
Molecular theory of polyelectrolyte solutions with application to electrostatic properties of polynucleotides
-
Manning GS (1978) Molecular theory of polyelectrolyte solutions with application to electrostatic properties of polynucleotides. Q Rev Biophys 11:179-246
-
(1978)
Q Rev Biophys
, vol.11
, pp. 179-246
-
-
Manning, G.S.1
-
24
-
-
44349169419
-
6-methylguanine on the stability of G-quadruplex DNA
-
DOI 10.1021/ja801976h
-
Mekmaysy CS, Petraccone L, Garbett NC, Ragazzon PA, Gray R, Trent JO, Chaires JB (2008) Effect of O6-methylguanine on the stability of G-quadruplex DNA. J Am Chem Soc 130:6710-6711. doi:10.1021/ja801976h (Pubitemid 351748399)
-
(2008)
Journal of the American Chemical Society
, vol.130
, Issue.21
, pp. 6710-6711
-
-
Mekmaysy, C.S.1
Petraccone, L.2
Garbett, N.C.3
Ragazzon, P.A.4
Gray, R.5
Trent, J.O.6
Chaires, J.B.7
-
25
-
-
0026319199
-
Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
-
doi 10.1002/prot.340110407
-
Nicholls A, Sharp KA, Honig B (1991) Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons. Proteins 11:281-296. doi:10.1002/prot.340110407
-
(1991)
Proteins
, vol.11
, pp. 281-296
-
-
Nicholls, A.1
Sharp, K.A.2
Honig, B.3
-
26
-
-
0037142071
-
Crystal structure of parallel quadruplexes from human telomeric DNA
-
DOI 10.1038/nature755
-
Parkinson GN, Lee MPH, Neidle S (2002) Crystal structure of parallel quadruplexes from human telomeric DNA. Nature 417:876-880. doi:10.1038/nature755 (Pubitemid 34670337)
-
(2002)
Nature
, vol.417
, Issue.6891
, pp. 876-880
-
-
Parkinson, G.N.1
Lee, M.P.H.2
Neidle, S.3
-
27
-
-
36148991081
-
+ solution
-
DOI 10.1093/nar/gkm706
-
Phan AT, Kyryavyi V, Luu KN, Patel DJ (2007) Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K? solution. Nucleic Acids Res 35:6517-6525. doi:10.1093/nar/gkm706 (Pubitemid 350111619)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.19
, pp. 6517-6525
-
-
Phan, A.T.1
Kuryavyi, V.2
Luu, K.N.3
Patel, D.J.4
-
28
-
-
0036154258
-
Size-distribution analysis of proteins by analytical ultracentrifugation: Strategies and application to model systems
-
doi 10.1016/S0006-3495(02)75469-6
-
Schuck P, Perungini MA, Gonzales NR, Howlett GJ, Schubert D (2002) Size-distribution analysis of proteins by analytical ultracentrifugation: strategies and application to model systems. Biophys J 82:1096-1111. doi:10.1016/S0006-3495(02)75469-6
-
(2002)
Biophys J
, vol.82
, pp. 1096-1111
-
-
Schuck, P.1
Perungini, M.A.2
Gonzales, N.R.3
Howlett, G.J.4
Schubert, D.5
-
29
-
-
0027918585
-
Solution structure of the human telomeric repeat d[AG3(T2AG3)3] G-tetraplex
-
DOI 10.1016/0969-2126(93)90015-9
-
Wang Y, Patel DJ (1993) Solution structure of the human telomeric repeat d[AG3(T2AG3)3] G-tetraplex. Structure 1:263-282. doi: 10.1016/0969-2126(93) 90015-9 (Pubitemid 2031126)
-
(1993)
Structure
, vol.1
, Issue.4
, pp. 263-282
-
-
Wang Yong1
Patel, D.J.2
-
30
-
-
0024787884
-
Monovalent cation-induced structure of telomeric DNA: The G-quartet model
-
DOI 10.1016/0092-8674(89)90610-7
-
Williamson JR, Raghuraman MK, Cech TR (1989) Monovalent cation-induced structure of telomeric DNA: the G-quartet model. Cell 59:871-880. doi:10.1016/0092-8674(89)90610-7 (Pubitemid 20022377)
-
(1989)
Cell
, vol.59
, Issue.5
, pp. 871-880
-
-
Williamson, J.R.1
Raghuraman, M.K.2
Cech, T.R.3
|