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Volumn 26, Issue 2, 2010, Pages 287-289

hPDI: A database of experimental human protein-DNA interactions

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DNA BINDING PROTEIN;

EID: 77950472891     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp631     Document Type: Article
Times cited : (68)

References (13)
  • 1
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
    • Ashburner, M. et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet., 25, 25-29.
    • (2000) Nat. Genet. , vol.25 , pp. 25-29
    • Ashburner, M.1
  • 2
    • 57749121616 scopus 로고    scopus 로고
    • A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters
    • Badis, G. et al. (2008) A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Mol. Cell, 32, 878-887.
    • (2008) Mol. Cell. , vol.32 , pp. 878-887
    • Badis, G.1
  • 3
    • 45449115390 scopus 로고    scopus 로고
    • Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences
    • Berger, M.F. et al. (2008) Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell, 133, 1266-1276.
    • (2008) Cell , vol.133 , pp. 1266-1276
    • Berger, M.F.1
  • 4
    • 2142738304 scopus 로고    scopus 로고
    • WebLogo: a sequence logo generator
    • Crooks, G.E. et al. (2004) WebLogo: a sequence logo generator. Genome Res., 14, 1188-1190.
    • (2004) Genome Res. , vol.14 , pp. 1188-1190
    • Crooks, G.E.1
  • 5
    • 33744972290 scopus 로고    scopus 로고
    • A gene-centered C. elegans protein-DNA interaction network
    • Deplancke, B. et al. (2006) A gene-centered C. elegans protein-DNA interaction network. Cell, 125, 1193-1205.
    • (2006) Cell , vol.125 , pp. 1193-1205
    • Deplancke, B.1
  • 6
    • 67650594823 scopus 로고    scopus 로고
    • A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors
    • Grove, C.A. et al. (2009) A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell, 138, 314-327.
    • (2009) Cell , vol.138 , pp. 314-327
    • Grove, C.A.1
  • 7
    • 70350340058 scopus 로고    scopus 로고
    • Profiling the human protein-DNA interactome reveals ERK2 as a transcriptional repressor of interferon signaling
    • Hu, S. et al. (2009) Profiling the human protein-DNA interactome reveals ERK2 as a transcriptional repressor of interferon signaling. Cell, 139, 610-622.
    • (2009) Cell , vol.139 , pp. 610-622
    • Hu, S.1
  • 8
    • 5444226387 scopus 로고    scopus 로고
    • An ORFeome-based analysis of human transcription factor genes and the construction of a microarray to interrogate their expression
    • Messina, D.N. et al. (2004) An ORFeome-based analysis of human transcription factor genes and the construction of a microarray to interrogate their expression. Genome Res., 14, 2041-2047.
    • (2004) Genome Res. , vol.14 , pp. 2041-2047
    • Messina, D.N.1
  • 9
    • 58149200952 scopus 로고    scopus 로고
    • UniPROBE: an online database of protein binding microarray data on protein-DNA interactions
    • Newburger, D.E. and Bulyk, M.L. (2009) UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic Acids Res., 37, D77-D82.
    • (2009) Nucleic Acids Res. , vol.37
    • Newburger, D.E.1    Bulyk, M.L.2
  • 10
    • 45449111373 scopus 로고    scopus 로고
    • Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites
    • Noyes, M.B. et al. (2008) Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites. Cell, 133, 1277-1289.
    • (2008) Cell , vol.133 , pp. 1277-1289
    • Noyes, M.B.1
  • 11
    • 0347125328 scopus 로고    scopus 로고
    • JASPAR: an open-access database for eukaryotic transcription factor binding profiles
    • Sandelin, A. et al. (2004) JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic Acids Res., 32, D91-D94.
    • (2004) Nucleic Acids Res. , vol.32
    • Sandelin, A.1
  • 12
    • 0029960055 scopus 로고    scopus 로고
    • TRANSFAC: a database on transcription factors and their DNA binding sites
    • Wingender, E. et al. (1996) TRANSFAC: a database on transcription factors and their DNA binding sites. Nucleic Acids Res., 24, 238-241.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 238-241
    • Wingender, E.1
  • 13
    • 63849315606 scopus 로고    scopus 로고
    • High-resolution DNA-binding specificity analysis of yeast transcription factors
    • Zhu, C. et al. (2009) High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res., 19, 556-566.
    • (2009) Genome Res. , vol.19 , pp. 556-566
    • Zhu, C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.