Morphological and molecular characteristics of a poorly known marine ascomycete, Manglicola guatemalensis (Jahnulales: Pezizomycotina; Dothideomycetes, Incertae sedis): New lineage of marine ascomycetes

Mycologia

Volumn 102, Issue 1, 2010, Pages 83-92

  Suetrong, Satinee ^a,b   Sakayaroj, Jariya ^b   Phongpaichit, Souwalak ^a   Jones, Gareth E B ^b  

^a PRINCE OF SONGKLA UNIVERSITY   (Thailand)

^b NATIONAL SCIENCE AND TECHNOLOGY DEVELOPMENT AGENCY   (Thailand)

Author keywords

Hypsostromataceae; Jahnulales; LSU rDNA; Phylogeny; SSU rDNA

Indexed keywords

BOOTSTRAPPING; BRACKISH WATER; FUNGUS; MONOCOTYLEDON; MORPHOLOGY; PHYLOGENETICS; PHYLOGENY;

CENTRAL REGION [THAILAND]; SOUTHERN REGION; THAILAND; TRANG; TRAT;

ALIQUANDOSTIPITE; ALIQUANDOSTIPITE KHAOYAIENSIS; ASCOMYCOTA; BRACHIOSPHAERA; DOTHIDEOMYCETES INCERTAE SEDIS; FUNGI; FUNGI IMPERFECTI; HYPSOSTROMATACEAE; JAHNULA; JAHNULA SIAMENSIAE; JAHNULALES; LOCULOASCOMYCETES; MANGLICOLA; MANGLICOLA GUATEMALENSIS; NYPA FRUTICANS; PATESCOSPORA SEPARANS; PEZIZOMYCOTINA; ROSTRATA; XYLOMYCES;

FUNGAL DNA; RIBOSOME DNA;

ARECACEAE; ARTICLE; ASCOMYCETES; BIOLOGY; CLASSIFICATION; DNA SEQUENCE; FUNGUS SPORE; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGY; PHYLOGENY; PLANT LEAF; SEQUENCE ALIGNMENT; SPECIES DIFFERENCE; THAILAND; ULTRASTRUCTURE;

ARECACEAE; ASCOMYCOTA; DNA, FUNGAL; DNA, RIBOSOMAL; MARINE BIOLOGY; MYCOLOGICAL TYPING TECHNIQUES; PHYLOGENY; PLANT LEAVES; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY; SPORES, FUNGAL; THAILAND;

EID: 77950342352     PISSN: 00275514     EISSN: 15572536     Source Type: Journal    
DOI: 10.3852/07-147     Document Type: Article

References (40)

1. Binder M, Hibbett DS. 2006. Molecular systematics and biological diversification of Boletales. Mycologia 98: 971-981.
2. Binder M, Hibbett DS., Wang Z, Farnham WF. 2006. Evolutionary relationships of Mycaureola dilsea (Agaricales), a basidiomycetes pathogen of a subtidal Rhodophyte. Am J Bot 93:547-556.
3. Bunyard BA, Nicholson MS, Royse DJ. 1994. A systematic assessment of Morchella using RFLP analysis of the 28S ribosomal RNA gene. Mycologia 86:762-772.
4. Campbell J, Ferrer A, Raja HA, Sivichai S, Shearer CA. 2007. Phylogenetic relationships among taxa in the Jahnulales inferred from 18S and 28S nuclear ribosomal DNA sequences. Can J Bot 85:873-888.
5. Campbell J, Shearer CA. 2003. Untangling the confusion in the Aliquandostipitaceae: Aliquandostipite and Jahnula. Inoculum. 14 p.
6. Eriksson OE. 2006. Outline of Ascomycota 2006. Myconet 12:1-82. Available at http://www.fieldmuseum.org/myconet/printed_v12_a.asp
7. Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
8. Hall T. 2004. Bioedit. Version 6.0.7. Raleigh: Department of Microbiology, North Carolina State University. http://www.mbio.ncsu.edu/BioEdit/bioedit.html
9. Hibbett DS, Binder M. 2001. Evolution of marine mushrooms. Biol Bull 201:319-322.
10. Hibbett DS, Binder M., Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, Huhndorf S, James T, Kirk PM, Lü cking R, Lumbsch T, Lutzoni F, Matheny PB, Mclaughlin DJ, Powell MJ, Redhead S, Schoch CL, Spatafora JW, Stalpers JA, Vilgalys R, Aime MC, Aptroot A, Bauer R, Begerow D, Benny GL, Castlebury LA, Crous PW, Dai Y-C, Gams W, Geiser DM, Griffith GW, Gueidan C, Hawksworth DL, Hestmark G, Hosaka K, Humber RA, Hyde K, Ironside JE, Kõ ljalg U, Kurtzman CP, Larsson K-H, Lichtwardt R, Longcore J, Midlikowska J, Miller A, Moncalvo J-M, Mozley-Standridge S, Oberwinkler F, Parmasto E, Reeb V, Rogers JD, Roux C, Ryvarden L, Sampaio JP, Schü ßler A, Sugiyama J, Thorn RG, Tibell L, Untereiner WA, Walker C, Wang Z, Weir A, Weiß M, White MM, Winka K, Yao Y-J, Zhang N. 2007. A higher-level phylogenetic classification of the Fungi. Mycol Res 84:509-547.
11. Hibbett DS, Thorn RG. 2001. Homobasidiomycetes. In: Mclaughlin DJ, McLaughlin EG, Lemke PA, eds. The Mycota VII. Systematics and evolution. Part B. Berlin: Springer-Verlag. p 121-170.
12. Huelsenbeck JP, Ronquist FR. 2001. MrBayes: Bayesian inference of 380 phylogenetic trees. Biometrics 17:754-755.
13. Huhndorf SM. 1992. Neotropical Ascomycetes 2. Hypsostroma, a new genus from the Dominican Republic and Venezuela. Mycologia 84:750-758.
14. Huhndorf SM. 1994. Neotropical Ascomycetes 5. Hypsostromataceae, a new family of Loculoascomycetes and Manglicola samuelsii, a new species from Guyana. Mycologia 86:266-269.
15. Hyde KD. 1988. Studies on the tropical marine fungi of Brunei. Bot J Linnean Soc 98:135-151.
16. Hyde KD. 1993. Tropical australian freshwater fungi V. Bombardia sp., Jahnula australiensis sp. nov., Savoryella aquatica sp. nov. and S. lignicola sp. nov. Aust Syst Bot 6:161-167.
17. Hyde KD., Wong SW. 1999. Tropical Australian freshwater fungi XV. The ascomycete genus Jahnula, with five new species and one new combination. Nov Hedwig 68:489-509.
18. Inderbitzin P, Landvik S, Abdel-Wahab A, Berbee ML. 2001. Aliquandostipitaceae, a new family for two new tropical ascomycetes with unusually wide hyphae and dimorphic ascomata. Am J Bot 88:52-61.
19. Jones EBG. 2000. Marine fungi: some factors influencing biodiversity. Fung Divers 4:53-73.
20. Jones EBG, Pilantanapak A, Chatmala I, Sakayaroj J, Phongpaichit S, Choeyklin R. 2006. Thai marine fungal diversity. Songklanakarin J Sci Technol 28:687-708.
21. Jones EBG, Sakayaroj J, Suetrong S, Somrithipol S, Pang KL. 2009. Classification of marine Ascomycota, anamorphic taxa and Basidiomycota. Fungal Diversity 35:1-187.
22. Kishino H, Hasegawa M. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order of Hominoidea. J Mol Evol 29:170-179.
23. Kohlmeyer J. 1984. Tropical marine fungi. P.S.Z.N.I. Mar Ecol 5:329-378.
24. Kohlmeyer J., Kohlmeyer E. 1971. Marine fungi from tropical America and Africa. Mycologia 63:831-861.
25. Landvik S. 1996. Neolecta, a fruit-body-producing genus of the basal ascomycetes, as shown by SSU and LSU rDNA sequence. Mycol Res 100:199-202.
26. Lumbsch HT, Lindemuth R. 2001. Major lineages of Dothideomycetes (Ascomycota) inferred from SSU and LSU rDNA sequences. Mycol Res 105:901-908.
27. Maekawa N, Suhara H, Kinjo K, Kondo R, Hoshi Y. 2005. Haloaleurodiscus mangrovei gen. sp. nov. (Basidiomycota) from mangrove forests in Japan. Mycol Res 109: 825-832.
28. O'Donnell K, Cigelnik E, Weber NS, Trappe JM. 1997. Phylogenetic relationships among ascomycetous truffles and the true and false morels inferred from 18S and 28S ribosomal DNA sequence analysis. Mycologia 89:48-65.
29. Pang KL, Abdel-Wahab MA, Sivichai S, El-Sharouney HM, Jones EBG. 2002. Jahnulales (Dothideomycetes, Ascomycota): a new order of lignicolous freshwater ascomycetes. Mycol Res 106:1031-1042.
30. Pilantanapak A, Jones EBG, Eaton RA. 2005. Marine fungi on Nypa fruticans in Thailand. Bot Mar 48:365-373.
31. Pinruan U, Jones EBG, Hyde KD. 2002. Aquatic fungi from peat swamp palms: Jahnula appendiculata sp. Nova Sydowia 54:242-247.
32. Raja HA, Ferrer A, Shearer CA. 2005. Aliquandostipite crystallinus, a new ascomycete species from submerged wood in freshwater habitats. Mycotaxon 91:207-215.
33. Raja HA, Shearer CA. 2006. Jahnula species from North and Central America, including three new species. Mycologia 98:319-332.
34. Sakayaroj J, Pang KL, Jones EBG, Phongpaichit S, Vrijmoed LLP, Abdel-Wahab MA. 2005. A systematic reassessment of the marine ascomycetes Torpedospora and Swampomyces. Bot Mar 48:395-406.
35. Schoch CL, Shoemaker RA, Seifert KA, Hambleton S, Spatafora JW, Crous PW. 2006. A multigene phylogeny of the Dothideomycetes using four nuclear loci. Mycologia 98:1041-1052.
36. Shearer CA. 1993. The freshwater ascomycetes. Nova Hedwigia 56:1-33.
37. Spatafora J, Volkmann-Kohlmeyer B, Kohlmeyer J. 1998. Independent terrestrial origins of the Halosphaeriales (marine Ascomycota). Am J Bot 85:1569-1580.
38. Swofford DL. 2002. PAUP*: Phylogenetic analysis using parsimony (*and other methods). Version 4.0b10. Sunderland, Massachusetts: Sinauer Associates.
39. Thompson JD, Higgins DG, Gibson TJ. 1994. Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680.
40. White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JS, White TJ, eds. PCR protocol: a guide to methods and applications. San Diego: Academic Press. p 315-322.