Interaction of an anthracycline disaccharide with ctDNA: Investigation by spectroscopic technique and modeling studies

Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy

Volumn 75, Issue 5, 2010, Pages 1511-1515

  Lu, Yan ^a   Lv, Juan ^a   Zhang, Guisheng ^a   Wang, Gongke ^a   Liu, Qingfeng ^a  

^a HENAN NORMAL UNIVERSITY   (China)

Author keywords

ctDNA; DNR D2; Fluorescence spectroscopy; Interaction; Molecular modeling; UV vis

Indexed keywords

BINDING MODES; BRITTON-ROBINSON BUFFER; CALF THYMUS; COMPUTATIONAL MODELING; CTDNA; DAUNORUBICIN; DEOXYRIBONUCLEIC ACIDS; DNA INTERACTION; DNR-D2; FLUORESCENCE QUENCHING MECHANISM; HYDROGEN BONDINGS; MODELING STUDIES; MOLECULAR MODELING TECHNIQUES; PHYSIOLOGICAL CONDITION; SPECTROSCOPIC INVESTIGATIONS; SPECTROSCOPIC TECHNIQUE; STATIC QUENCHING; THERAPEUTIC EFFICIENCY; UV-VIS AND FLUORESCENCE SPECTRA;

BINDING ENERGY; CHROMOPHORES; DNA; FLUORESCENCE SPECTROSCOPY; HYDROGEN BONDS; KETONES; MOLECULAR MODELING; ORGANIC ACIDS; QUENCHING; SULFUR COMPOUNDS;

FLUORESCENCE;

4' O (OLEANDROSYL)DAUNORUBICIN; 4'-O-(OLEANDROSYL)DAUNORUBICIN; CALF THYMUS DNA; DAUNORUBICIN; DISACCHARIDE; DNA; DRUG DERIVATIVE;

ANIMAL; ARTICLE; BINDING SITE; CATTLE; CHEMICAL STRUCTURE; CHEMISTRY; KINETICS; METABOLISM; SPECTROFLUOROMETRY; TEMPERATURE; ULTRAVIOLET SPECTROPHOTOMETRY;

ANIMALS; BINDING SITES; CATTLE; DAUNORUBICIN; DISACCHARIDES; DNA; KINETICS; MODELS, MOLECULAR; SPECTROMETRY, FLUORESCENCE; SPECTROPHOTOMETRY, ULTRAVIOLET; TEMPERATURE;

EID: 77949915631     PISSN: 13861425     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.saa.2010.02.008     Document Type: Article

References (45)

1. Evstigneev M.P., Rybakova K.A., and Davies D.B. Biophys. Chem. 121 (2006) 84-95
2. Wei C.Y., Han G.Y., Jia G.Q., Zhou J., and Li C. Biophys. Chem. 137 (2008) 19-23
3. Kelly J.M., Murphy M.J., Mcconnell D.J., and Ohuigin C.A. Nucleic Acids Res. 13 (1985) 167-184
4. Yamashita T., Uno T., and Ishikawa Y. Bioorg. Med. Chem. 13 (2005) 2423-2430
5. Singh M.P., Joseph T., Kumar S., Bathini Y., and Lown J.W. Chem. Res. Toxicol. 5 (1992) 597-607
6. Laurie L.P., Fiona M.A., Caroline OHare.C., Stephen M.L., John P.B., David J.R., and John A.H. Bioorg. Med. Chem. 13 (2005) 2389-2395
7. Kamal Rajender A., Rajasekhar D.R., Kashi Reddy M., Balakishan G., Basha Shaik T., Chourasia M., and Narahari Sastry G. Bioorg. Med. Chem. 17 (2009) 1557-1572
8. Ivandini T.A., Honda K., Rao T.N., Fujishima A., and Einaga Y. Talanta 71 (2007) 648-665
9. Pang J.Y., Qin Y., Chen W.H., Luo G.A., and Jiang Z.H. Bioorg. Med. Chem. 13 (2005) 5835-5840
10. Wei C., Jia G., Yuan J., Feng Z., and Li C. Biochemistry 45 (2006) 6681-6691
11. Davies D.B., Evstigneev M.P., Veselkov D.A., and Veselkov A.N. Biophys. Chem. 117 (2005) 111-118
12. Waring M. J. Mol. Biol. 54 (1970) 247-279
13. Chaires J.B. Arch. Biochem. Biophys. 453 (2006) 26-31
14. Weiss R.B., Sarosy G., Clagett-Carr K., and Russo M. Cancer. Chemoth. Pharm. 18 (1986) 185-197
15. Graves D.E., and Velea L.M. Curr. Org. Chem. 4 (2000) 915-928
16. Baker L.H., Frank J., Fine G., Balcerzak S.P., Stephens R.L., Stuckey W.J., Rivkin S., Saiki J., and Ward J.H. J. Clin. Oncol. 5 (1987) 851-861
17. Taylor C.G., Elgie A.W., Williamson C.J., and Sargent J.M. Leukemia 15 (2001) 492
18. Than Htun M. J. Lumin. 129 (2009) 344-348
19. Longley D.B., and Johnston P.G. J. Pathol. 205 (2005) 275-292
20. Cui F.L., Qin L.X., Zhang G.S., Liu Q.F., Yao X.J., and Lei B.L. Pharm. Biomed. Anal. 48 (2008) 1029-1036
21. Fang L.Y., Zhang G.S., Li C.L., Zheng X.C., Zhu L.Z., Xiao J.J., Gergely S., Janos N., Kenneth K., Chan, Wang P.G., and Sun D.X. J. Med. Chem. 49 (2006) 932-941
22. Beraldo H., Garnier-Suillerot A., Tosi L., and Lavelles F. Biochemistry 24 (1985) 284-289
23. Zhang G.S., Fang L.Y., Zhu L.Z., Aimiuwu J.E., Shen J., H C., Muller M.T., Lee G.E., Sun D.X., and Wang P.G. J. Med. Chem. 48 (2005) 5269-5278
24. Robert F.B., Zhong Y.Q., Fang L.Y., Seth G., Jie S., Janos N., Zhang G.S., and Sun D.X. Mol. Pharm. 4 (2007) 140-153
25. Fukuda R., Takenaka S., and Takagi M. J. Chem. Soc. Chem. Commun. (1990) 1028-1030
26. Kapuscinski J., and Darzynkiewicz Z. Biochem. Pharmacol. 34 (1985) 4203-4213
27. Dang X.J., Nie M.Y., Tong J., and Li H.L. J. Electroanal. Chem. 448 (1998) 61-67
28. Li N., Ma Y., Yang C., Guo L., and Yang X.R. Biophys. Chem. 116 (2005) 199-205
29. Li J.F., and Dong C. Spectrochim. Acta Part A 71 (2009) 1938-1943
30. Bera R., Sahoo B.K., Ghosh K.S., and Dasgupta S. Biol. Macromol. 42 (2008) 14-21
31. Lu Y., wang Y.L., Gao S.H., Wang G.K., Yan C.L., and Chen D.J. J. Lumin. 129 (2009) 1048-1054
32. Ashoka S., Seetharamappa J., Kandagal P.B., and Shaikh S.M.T. J. Lumin. 121 (2006) 179-186
33. Lakowicz J.R. Principles of Fluorescence Spectroscopy. third ed. (2006), Spinger pp. 278-282
34. Ware W.R. J. Phys. Chem. 66 (1962) 455-458
35. Yue Y.Y., Zhang Y.H., Zhou L., Qin J., and Chen X.G. J. Photochem. Photobiol., B 90 (2008) 26-32
36. Cui F.L., Qin L.X., Zhang G.S., Yao X.J., and Du J. Biol. Macromol. 42 (2008) 221-228
37. Bi S.Y., Song D.Q., Tian Y., Zhou X., Liu Z.Y., and Zhang H.Q. Spectrochim. Acta A 61 (2005) 629-636
38. Juziro N., and Noriko M. Chem. Pharm. Bull. 33 (1985) 2522-2524
39. Neméthy G., and Scheraga H.A. J. Phys. Chem. 66 (1962) 1773-1789
40. Ross P.D., and Subramanian S. Biochemistry 20 (1981) 3096-3102
41. Takenaka S., Ihara T., and Takagi M. J. Chem. Soc. Chem. Commun. (1990) 1485-1487
42. Xu Y., Jing Y., Cai H., and Fang Y.Z. Anal. Chim. Acta 516 (2004) 19-27
43. Cui F.L., Wang J.L., Cui Y.R., Li J.P., Yao X.J., Lu Y., and Fan J. J. Lumin. 127 (2007) 409-415
44. Eleni E., Alexandra K.K., and George P. Polyhedron 27 (2008) 1729-1738
45. Tan J., Wang B.C., and Zhu L.C. Bioorg. Med. Chem. 17 (2009) 614-620