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Volumn 11, Issue , 2010, Pages

Testing the additional predictive value of high-dimensional molecular data

Author keywords

[No Author keywords available]

Indexed keywords

BIOMEDICAL RESEARCH; COMPUTATIONALLY EFFICIENT; LOGISTIC REGRESSIONS; MICROARRAY GENE EXPRESSION DATA; OUTCOME PREDICTION; PREDICTIVE VALUES; STATISTICAL TOOLS; TESTING PROCEDURE;

EID: 77949911450     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-11-78     Document Type: Article
Times cited : (33)

References (25)
  • 2
    • 3843116922 scopus 로고    scopus 로고
    • "Good old" clinical markers have similar power in breast cancer prognosis as microarray gene expression profilers
    • 10.1016/j.ejca.2004.02.025, 15288284
    • Eden P, Ritz C, Rose C, Fernö M, Peterson C. "Good old" clinical markers have similar power in breast cancer prognosis as microarray gene expression profilers. European Journal of Cancer 2004, 40:1837-1841. 10.1016/j.ejca.2004.02.025, 15288284.
    • (2004) European Journal of Cancer , vol.40 , pp. 1837-1841
    • Eden, P.1    Ritz, C.2    Rose, C.3    Fernö, M.4    Peterson, C.5
  • 3
    • 57049093234 scopus 로고    scopus 로고
    • Comparative optimism in models involving both classical clinical and gene expression information
    • 10.1186/1471-2105-9-434, 2588601, 18854055
    • Truntzer C, Maucort-Boulch D, Roy P. Comparative optimism in models involving both classical clinical and gene expression information. BMC Bioinformatics 2008, 9:434. 10.1186/1471-2105-9-434, 2588601, 18854055.
    • (2008) BMC Bioinformatics , vol.9 , pp. 434
    • Truntzer, C.1    Maucort-Boulch, D.2    Roy, P.3
  • 6
    • 39449093646 scopus 로고    scopus 로고
    • Allowing for mandatory covariates in boosting estimation of sparse high-dimensional survival models
    • 10.1186/1471-2105-9-14, 2245904, 18186927
    • Binder H, Schumacher M. Allowing for mandatory covariates in boosting estimation of sparse high-dimensional survival models. BMC Bioinformatics 2008, 9:14. 10.1186/1471-2105-9-14, 2245904, 18186927.
    • (2008) BMC Bioinformatics , vol.9 , pp. 14
    • Binder, H.1    Schumacher, M.2
  • 7
    • 0345832338 scopus 로고    scopus 로고
    • A global test for groups of genes: testing association with a clinical outcome
    • 10.1093/bioinformatics/btg382, 14693814
    • Goeman J, Geer S, de Kort F, van Houwelingen HC. A global test for groups of genes: testing association with a clinical outcome. Bioinformatics 2004, 20:93-99. 10.1093/bioinformatics/btg382, 14693814.
    • (2004) Bioinformatics , vol.20 , pp. 93-99
    • Goeman, J.1    Geer, S.2    de Kort, F.3    van Houwelingen, H.C.4
  • 8
    • 18744406044 scopus 로고    scopus 로고
    • Testing association of a pathway with survival using gene expression data
    • 10.1093/bioinformatics/bti267, 15657105
    • Goeman JJ, Oosting J, Cleton-Jansen AM, Anninga JK, van Houwelingen HC. Testing association of a pathway with survival using gene expression data. Bioinformatics 2005, 21:1950-1957. 10.1093/bioinformatics/bti267, 15657105.
    • (2005) Bioinformatics , vol.21 , pp. 1950-1957
    • Goeman, J.J.1    Oosting, J.2    Cleton-Jansen, A.M.3    Anninga, J.K.4    van Houwelingen, H.C.5
  • 9
    • 77949881843 scopus 로고    scopus 로고
    • Globaltest (Testing association of groups of genes with a clinical variable)
    • [Bioconductor Package version 4.12.0]
    • Goeman JJ. globaltest (Testing association of groups of genes with a clinical variable). 2008, [Bioconductor Package version 4.12.0].
    • (2008)
    • Goeman, J.J.1
  • 10
    • 48249110665 scopus 로고    scopus 로고
    • Microarray-based classification and clinical predictors: On combined classifiers and additional predictive value
    • 10.1093/bioinformatics/btn262, 18544547
    • Boulesteix AL, Porzelius C, Daumer M. Microarray-based classification and clinical predictors: On combined classifiers and additional predictive value. Bioinformatics 2008, 24:1698-1706. 10.1093/bioinformatics/btn262, 18544547.
    • (2008) Bioinformatics , vol.24 , pp. 1698-1706
    • Boulesteix, A.L.1    Porzelius, C.2    Daumer, M.3
  • 11
    • 33747891871 scopus 로고    scopus 로고
    • Predicting the prognosis of breast cancer by integrating clinical and microarray data with Bayesian networks
    • 10.1093/bioinformatics/btl230, 16873470
    • Gevaert O, de Smet F, Timmermann D, Moreau Y, de Moor B. Predicting the prognosis of breast cancer by integrating clinical and microarray data with Bayesian networks. Bioinformatics 2006, 22:e184-e190. 10.1093/bioinformatics/btl230, 16873470.
    • (2006) Bioinformatics , vol.22
    • Gevaert, O.1    de Smet, F.2    Timmermann, D.3    Moreau, Y.4    de Moor, B.5
  • 12
    • 33845881963 scopus 로고    scopus 로고
    • Improved breast cancer prognosis through the combination of clinical and genetic markers
    • 10.1093/bioinformatics/btl543, 17130137
    • Sun Y, Goodison S, Li J, Liu L, Farmerie W. Improved breast cancer prognosis through the combination of clinical and genetic markers. Bioinformatics 2007, 23:30-37. 10.1093/bioinformatics/btl543, 17130137.
    • (2007) Bioinformatics , vol.23 , pp. 30-37
    • Sun, Y.1    Goodison, S.2    Li, J.3    Liu, L.4    Farmerie, W.5
  • 14
    • 41549141939 scopus 로고    scopus 로고
    • Boosting algorithms: regularization, prediction and model fitting (with discussion)
    • Bühlmann P, Hothorn T. Boosting algorithms: regularization, prediction and model fitting (with discussion). Statistical Science 2007, 22:477-505.
    • (2007) Statistical Science , vol.22 , pp. 477-505
    • Bühlmann, P.1    Hothorn, T.2
  • 16
    • 0034164230 scopus 로고    scopus 로고
    • Additive logistic regression: a statistical view of boosting
    • Friedman J, Hastie T, Tibshirani R. Additive logistic regression: a statistical view of boosting. Annals of Statistics 2000, 28:2000.
    • (2000) Annals of Statistics , vol.28 , pp. 2000
    • Friedman, J.1    Hastie, T.2    Tibshirani, R.3
  • 17
    • 33750397113 scopus 로고    scopus 로고
    • Model-based boosting in high dimensions
    • 10.1093/bioinformatics/btl462, 16940323
    • Hothorn T, Bühlmann P. Model-based boosting in high dimensions. Bioinformatics 2006, 22:2828-2829. 10.1093/bioinformatics/btl462, 16940323.
    • (2006) Bioinformatics , vol.22 , pp. 2828-2829
    • Hothorn, T.1    Bühlmann, P.2
  • 19
    • 84874666992 scopus 로고    scopus 로고
    • [R package version 1.4.4]
    • Li X. ALL 2008, [R package version 1.4.4]., http://www.bioconductor.org/packages/release/data/experiment/html/ALL.html
    • (2008) ALL
    • Li, X.1
  • 20
    • 1642317557 scopus 로고    scopus 로고
    • Gene expression profile of adult T-cell acute lymphocytic leukemia identifies distinct subsets of patients with different response to therapy and survival
    • 10.1182/blood-2003-09-3243, 14684422
    • Chiaretti S, Li X, Gentleman R, Vitale A, Vignetti M, Mandelli F, Ritz J, Foa R. Gene expression profile of adult T-cell acute lymphocytic leukemia identifies distinct subsets of patients with different response to therapy and survival. Blood 2004, 103:2771-2778. 10.1182/blood-2003-09-3243, 14684422.
    • (2004) Blood , vol.103 , pp. 2771-2778
    • Chiaretti, S.1    Li, X.2    Gentleman, R.3    Vitale, A.4    Vignetti, M.5    Mandelli, F.6    Ritz, J.7    Foa, R.8
  • 21
    • 18244409687 scopus 로고    scopus 로고
    • Gene expression profiling predicts clinical outcome of breast cancer
    • 10.1038/415530a, 11823860
    • van't Veer LJ, Dai H, Vijver MJ, et al. Gene expression profiling predicts clinical outcome of breast cancer. Nature 2002, 415:530-536. 10.1038/415530a, 11823860.
    • (2002) Nature , vol.415 , pp. 530-536
    • van't Veer, L.J.1    Dai, H.2    Vijver, M.J.3
  • 22
    • 84874660607 scopus 로고    scopus 로고
    • [R package, Workshop "Advanced microarray data analysis: Class discovery and class prediction"]
    • Fridlyand J, Yang JYH. DENMARKLAB 2004, [R package, Workshop "Advanced microarray data analysis: Class discovery and class prediction"]., http://genome.cbs.dtu.dk/courses/norfa2004/Extras/DENMARKLAB.zip
    • (2004) DENMARKLAB
    • Fridlyand, J.1    Yang, J.Y.H.2
  • 23
    • 77949535610 scopus 로고    scopus 로고
    • Over-optimism in bioinformatics research
    • 10.1093/bioinformatics/btp648, 19942585
    • Boulesteix AL. Over-optimism in bioinformatics research. Bioinformatics 2010, 26:437-439. 10.1093/bioinformatics/btp648, 19942585.
    • (2010) Bioinformatics , vol.26 , pp. 437-439
    • Boulesteix, A.L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.