Genetic diversity among the six varieties of Acacia caven (Leguminosae, Mimosoideae) evaluated at the molecular and phenotypic levels

Plant Systematics and Evolution

Volumn 284, Issue 3, 2010, Pages 187-199

  Pometti, Carolina L ^a   Vilardi, Juan C ^a   Cialdella, Ana M ^b   Saidman, Beatriz O ^a  

^a UNIVERSIDAD DE BUENOS AIRES   (Argentina)

^b INSTITUTO DE BOTÁNICA DARWINION   (Argentina)

Author keywords

Acacia caven; Discriminant analysis; Genetic diversity; Morphological traits; RAPD; Varieties

Indexed keywords

ACACIA; ACACIA CAVEN; FABACEAE; MIMOSOIDEAE;

EID: 77949540115     PISSN: 03782697     EISSN: 16156110     Source Type: Journal    
DOI: 10.1007/s00606-009-0244-y     Document Type: Article

References (51)

1. Aronson J (1992) Evolutionary biology of Acacia caven (Leguminosae, Mimosoideae): infraspecific variation in fruit and seed characters. Ann Missouri Bot Garden 79: 958-968.
2. Artyukova EV, Kozyrenko MM, Reunova GD, Muzarok TI, Zhuravlev YN (2000) RAPD analysis of genome variability of planted ginseng, Panax ginseng. Mol Biol 34: 339-344.
3. Baranelli JL, Cocucci AA, Anton AM (1995) Reproductive Biology in Acacia caven (Mol.) Mol. (Leguminosae) in the central region of Argentina. Bot J Linn Soc 119: 65-76.
4. Bentham G (1842) Notes on Mimosae, with a synopsis of species. Lond J Bot 1(318-392): 494-528.
5. Bentham G (1875) Revision of the suborder Mimosae. Trans Linn Soc Lond 30: 335-664.
6. Black IV WC (1996) FORTRAN programs for the analysis of RAPD-PCR markers in populations. Colorado State University, Fort Collins.
7. Casiva PV, Saidman BO, Vilardi JC, Cialdella AM (2002) First comparative phenetic studies of Argentinean species of Acacia (Fabaceae), using morphometric, isozymal, and RAPD approaches. Am J Bot 89(5): 843-853.
8. Cialdella AM (1984) El género Acacia (Leguminosae) en la Argentina. Darwiniana 25 (1-4): 59-111, f. 1-8.
9. Dyer RJ (2008) GeneticStudio: population genetic software that doesn't suck. http://dyerlab. bio. vcu. edu.
10. Dyer RJ, Westfall RW, Sork VL, Smouse PE (2004) Two-generation analysis of pollen flow across a landscape V: a stepwise approach for extracting factors contributing to pollen structure. Heredity 92(3): 204-211.
11. Ebinger JE, Seigler DS, Clarke HD (2000) Taxonomic revision of South American species of the Genus Acacia Subgenus Acacia (Fabaceae: Mimosoideae). Syst Bot 25(4): 588-617.
12. Excoffier L, Smouse P, Quattro J (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
13. Guinet P, Vassal J (1978) Hypotheses on the differentiation of the major groups in the genus Acacia (Leguminosae). Kew Bull 32: 509-527.
14. Gutierrez JR, Armesto JJ (1981) El rol del ganado en la dispersión de las semillas de Acacia caven (Leguminosae). Ciencia e Investigación Agraria 8: 3-8.
15. Hamrick JC, Godt JW (1990) Allozyme diversity in plant species. In: Brown HD, Clegg MT, Kahler AL, Weir BS (eds) Plant population genetics, breeding, and genetic resources. Sinauer Associates, Sunderland, pp 43-65.
16. Hamrick JL, Loveless MD (1989) The genetic structure of tropical tree population: associations with reproductive biology. In: Bock JH, Linhart YB (eds) The evolutionary ecology of plants. Westview Press, Boulder, pp 129-146.
17. Hamrick JC, Godt JW, Sherman-Broyles SL (1992) Factors influencing levels of genetic diversity in woody plant species. New Forests (Springer) 6: 95-124.
18. Holsinger KE, Lewis PO, Dipak KD (2002) A Bayesian approach to inferring population structure from dominant markers. Mol Ecol 11: 1157-1164.
19. Hothorn T, Hornik K (2007) The exact rank tests package. (http://www. r-project. org).
20. Hothorn T, Hornik K, van De Wiel M, Zeileis A (2007) COIN: conditional inference procedures in a permutation test framework. (http://www. r-project. org).
21. Joly HI, Zeh-Nlo M, Danthu P, Aygalent C (1992) Population genetics of an African acacia, Acacia albida I. Genetic diversity of populations from West Africa. Aust J Bot 40: 59-73.
22. Karlin OU, Coirini RO, Catalan L, Zapata R (1997) Acacia caven. In: Oficina Regional de la FAO para America Latina y el Caribe (ed) Especies arbóreas y arbustivas para las zonas áridas y semiáridas de América Latina. Zonas áridas y semiáridas, vol 12. FAO/PNUMA, Santiago, Chile, pp 157-167.
23. Li F, Xiong ZT, Li FM, Zhu YG (1999) Genetic diversity and divergence between populations of Hemerocallis lilioasphodelus L. from Henan and Hunan Province. Wuhan Daxue Xuebao, Ziran Kexueban 45: 849-851.
24. Li X, Ralphs MH, Gardner DR, Wang RRC (2002) Genetic variation within and among 22 accessions of three tall larkspur species (Delphinium spp.) based on RAPD markers. Biochem Syst Ecol 30: 91-102.
25. Li F, Gan S, Weng Q, Zhao X, Huang S, Li M, Chen S, Wang Q, Shi F (2008) RAPD and morphological diversity among four populations of the tropical tree species Paramichelia baillonii (Pierre) Hu in China. For Ecol Manag 255: 1793-1801.
26. Luckow M (2005) Tribe Mimoseae. In: Lewis G et al (eds) Legumes of the World, pp 163-183.
27. Lynch M, Milligan BG (1994) Analysis of population structure with RAPD markers. Mol Ecol 3: 91-99.
28. McGranahan M, Bell JC, Moran GF, Slee M (1997) High genetic divergence between geographic regions in the highly outcrossing species Acacia aulacocarpa (Cunn. ex Benth.). For Genet 4: 1-13.
29. ® program for the analysis of allozyme and molecular population genetic data. Department of Biological Sciences, Northern Arizona University.
30. Moran GF, Muona O, Bell JC (1989) Breeding systems and genetic diversity in Acacia auriculiformis and Acacia crassicarpa. Biotropica 21: 250-256.
31. Mueller UG, Wolfenbarger LL (1999) AFLP genotyping and fingerprinting. Trends Ecol Evol 14: 389-394.
32. Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590.
33. Nybom H (2004) Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol Ecol 13: 1143-1155.
34. Nybom H, Bartish IV (2000) Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants. Perspect Plant Ecol Evol Syst 3(2): 93-114.
35. Ohta T (1982a) Linkage disequilibrium due to random genetic drift in finite subdivided populations. In: Proceedings of the National Academy of Sciences of the United States of America 79: 1940-1944.
36. Ohta T (1982b) Linkage disequilibrium with the island model. Genetics 101: 139-155.
37. Peralta I, Rodriguez JG, Arroyo MTK (1992) Breeding system and aspects of pollination in Acacia caven (Mol.) Mol. (Leguminosae: Mimosoideae) in the Mediterranean type climate zone of central Chile. Botanische Jahrbucher fur Systematik, Pflanzengeshichte und Pflanzengeographie 114: 297-314.
38. Perriere G, Lobry JR, Thioulouse J (1996) Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences. CABIOS 12: 519-524.
39. Playford J, Bell JC, Moran GF (1993) A major disjunction in genetic diversity over the geographic range of Acacia melanoxylon R. Br. Aust J Bot 41: 355-368.
40. Polhill RM, Raven PH, Stirton CH (1981) Evolution and Systematics of the Leguminosae: In: Polhill RM, Raven PH (eds) Advances in legumes systematics, vol 1. Royal Botanic Gardens, Kew, pp 1-26.
41. Pometti CL, Cialdella AM, Vilardi JC, Saidman BO (2007) Morphometric analysis of varieties of Acacia caven: (Leguminosae, Mimosoideae): Taxonomic inferences in the context of other Argentinean species. Plant Syst Evol 264: 239-249.
42. Ross JH (1981) An analysis of the African Acacia species: their distribution, possible origins and relationships. Bothalia 13: 389-413.
43. R Development Core Team (2009) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, URL http://www. R-project. org.
44. Saidman BO, Vilardi JC (1993) Genetic variability and germplasm conservation in the genus Prosopis. In: Puri S (ed) Nursery technology of forest tree species of arid and semiarid regions. Winrock-Oxford & IBH Publishing Co. PVT. Ltd, New Delhi, Bombay, Calcutta, pp 187-198.
45. Swofford DL, Selander RB (1981) Biosys: a FORTRAN program for the comprehensive analysis for electrophoretic data in population genetics and systematics. Heredity 72: 281-283.
46. Vassal J (1972) Apport des recherches ontogéniques et séminologiques a l'étude morphologique, taxonomique et phylogénique du genre Acacia. Bulletin de la Societé d'Histoire Naturelle de Toulouse 108: 1-115.
47. Vekemans X (2002) AFLP-SURV version 1. 0. Distributed by the author. Laboratoire de Génétique et Ecologie Végétale. Université Libre de Bruxelles, Belgium.
48. Vilardi JC, Saidman BO, Palacios RA (1988) Muestreo según variabilidad. In: Prosopis en Argentina. Documento preliminar elaborado para el I Taller Internacional sobre Recurso genético y conservación de germoplasma en Prosopis. Fac. de Cs. Agropecuarias, UNC-FAO, PIRB, pp 119-124.
49. Wright S (1943) Isolation by distance. Genetics 28(2): 114-138.
50. Wright S (1978) Evolution and the genetics of populations variability within and among natural populations, vol 4. University of Chicago Press, Chicago.
51. Zhivotovsky LA (1999) Estimating population structure in diploids with multilocus dominant DNA markers. Mol Ecol 8: 907-913.