DataPflex: A MATLAB-based tool for the manipulation and visualization of multidimensional datasets

Bioinformatics

Volumn 26, Issue 3, 2009, Pages 432-433

  Hendriks, Bart S ^a   Espelin, Christopher W ^a  

^a PFIZER GLOBAL RESEARCH AND DEVELOPMENT   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 77949495646     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp667     Document Type: Article

References (7)

1. Cosgrove, B.D. et al. (2009a) A multipathway phosphoproteomic signaling network model of idiosyncratic drug- and inflammatory cytokine-induced toxicity in human hepatocytes. Conf Proc IEEE Eng Med Biol Soc., 1, 5452-5455.
2. Cosgrove, B.D. et al. (2009b) Synergistic drug-cytokine induction of hepatocellular death as an in vitro approach for the study of inflammation-associated idiosyncratic drug hepatotoxicity. Toxicol. Appl. Pharmacol., 237, 317-330.
3. Gaudet, S. et al. (2005) A compendium of signals and responses triggered by prodeath and prosurvival cytokines. Mol. Cell Proteomics, 4, 1569-1590.
4. Mitsos, A. et al. (2009) Identifying drug effects via pathway alterations using an integer linear programming optimization formulation on phosphoproteomic data. PLoS Comput Biol., 5, e1000591 [Epub ahead of print 4 December 2009].
5. Pritchard, J.R. et al. (2009) Three-kinase inhibitor combination recreates multipathway effects of a geldanamycin analogue on hepatocellular carcinoma cell death. Mol. Cancer Therap., 8, 2183-2192.
6. Saez-Rodriguez, J. et al. (2008) Flexible informatics for linking experimental data to mathematical models via DataRail. Bioinformatics, 24, 840-847.
7. Samaga, R. et al. (2009) The logic of EGFR/ErbB signaling: theoretical properties and analysis of high-throughput data. PLoS Comput. Biol., 5, e1000438.