메뉴 건너뛰기




Volumn 165, Issue 1, 2010, Pages 97-104

PCR assays for the detection of members of the genus Ilarvirus and family Bromoviridae

Author keywords

Bromoviridae; Ilarviruses; RT PCR; Universal primers

Indexed keywords

RNA HELICASE; RNA POLYMERASE;

EID: 77949265516     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2010.01.011     Document Type: Article
Times cited : (40)

References (34)
  • 1
    • 0032904782 scopus 로고    scopus 로고
    • Alfalfa mosaic virus and Ilarviruses: involvement of coat protein in multiple steps of the replication cycle
    • Bol J.F. Alfalfa mosaic virus and Ilarviruses: involvement of coat protein in multiple steps of the replication cycle. J. Gen. Virol. 80 (1999) 1089-1102
    • (1999) J. Gen. Virol. , vol.80 , pp. 1089-1102
    • Bol, J.F.1
  • 2
    • 0032538794 scopus 로고    scopus 로고
    • Viral pathogenicity determinants are suppressors of transgene silencing in Nicotiana benthamiana
    • Brigneti G., Voinnet O., Li W.X., Ji L.H., Ding S.W., and Baulcombe D.C. Viral pathogenicity determinants are suppressors of transgene silencing in Nicotiana benthamiana. EMBO J. 17 (1998) 6739-6746
    • (1998) EMBO J. , vol.17 , pp. 6739-6746
    • Brigneti, G.1    Voinnet, O.2    Li, W.X.3    Ji, L.H.4    Ding, S.W.5    Baulcombe, D.C.6
  • 3
    • 0032950839 scopus 로고    scopus 로고
    • Transmission and the role of honeybees in field spread of blueberry shock ilarvirus, a pollen-borne virus of highbush blueberry
    • Bristow P.R., and Martin R.R. Transmission and the role of honeybees in field spread of blueberry shock ilarvirus, a pollen-borne virus of highbush blueberry. Phytopathology 89 (1999) 124-130
    • (1999) Phytopathology , vol.89 , pp. 124-130
    • Bristow, P.R.1    Martin, R.R.2
  • 5
    • 67651230567 scopus 로고    scopus 로고
    • Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2008)
    • Carstens E.B., and Ball L.A. Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2008). Arch. Virol. 154 (2009) 1181-1188
    • (2009) Arch. Virol. , vol.154 , pp. 1181-1188
    • Carstens, E.B.1    Ball, L.A.2
  • 6
    • 31144474280 scopus 로고    scopus 로고
    • Evolutionary relationships among members of the Bromoviridae deduced from whole proteome analysis
    • Codoñer F.M., and Elena S.F. Evolutionary relationships among members of the Bromoviridae deduced from whole proteome analysis. Arch. Virol. 151 (2006) 299-307
    • (2006) Arch. Virol. , vol.151 , pp. 299-307
    • Codoñer, F.M.1    Elena, S.F.2
  • 7
    • 0037210977 scopus 로고    scopus 로고
    • A spot nested RT-PCR method for the simultaneous detection of members of the Vitivirus and Foveavirus genera in grapevine
    • Dovas C.I., and Katis N.I. A spot nested RT-PCR method for the simultaneous detection of members of the Vitivirus and Foveavirus genera in grapevine. J. Virol. Meth. 107 (2003) 99-106
    • (2003) J. Virol. Meth. , vol.107 , pp. 99-106
    • Dovas, C.I.1    Katis, N.I.2
  • 9
    • 0000768213 scopus 로고
    • Thrips-facilitated transmission of prune dwarf and prunus necrotic ringspot viruses from cherry pollen to cucumber
    • Greber R.S., Teakle D.S., and Mink G.I. Thrips-facilitated transmission of prune dwarf and prunus necrotic ringspot viruses from cherry pollen to cucumber. Plant Dis. 76 (1992) 1039-1041
    • (1992) Plant Dis. , vol.76 , pp. 1039-1041
    • Greber, R.S.1    Teakle, D.S.2    Mink, G.I.3
  • 10
    • 12344267827 scopus 로고    scopus 로고
    • Simultaneous detection of six stone fruit viruses by non-isotopic molecular hybridization using a unique riboprobe or 'polyprobe'
    • Herranz M.C., Sanchez-Navarro J.A., Aparicio F., and Pallas V. Simultaneous detection of six stone fruit viruses by non-isotopic molecular hybridization using a unique riboprobe or 'polyprobe'. J. Virol. Meth. 124 (2005) 49-55
    • (2005) J. Virol. Meth. , vol.124 , pp. 49-55
    • Herranz, M.C.1    Sanchez-Navarro, J.A.2    Aparicio, F.3    Pallas, V.4
  • 11
    • 0033060554 scopus 로고    scopus 로고
    • Genome activation in alfamo- and ilarviruses
    • Jaspars E.M. Genome activation in alfamo- and ilarviruses. Arch. Virol. 144 (1999) 843-863
    • (1999) Arch. Virol. , vol.144 , pp. 843-863
    • Jaspars, E.M.1
  • 12
    • 0000769225 scopus 로고
    • Natural hosts and vectors of tobacco streak virus in eastern Washington
    • Kaiser W.J., Wyatt S.D., and Pesho G.R. Natural hosts and vectors of tobacco streak virus in eastern Washington. Phytopathology 72 (1982) 1508-1512
    • (1982) Phytopathology , vol.72 , pp. 1508-1512
    • Kaiser, W.J.1    Wyatt, S.D.2    Pesho, G.R.3
  • 13
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S., Tamura K., and Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings Bioinform. 5 (2004) 150-163
    • (2004) Briefings Bioinform. , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 15
    • 0344313134 scopus 로고
    • Characterization of an ilarvirus associated with a necrotic shock reaction in blueberry
    • MacDonald S.G., Martin R.R., and Bristow P.R. Characterization of an ilarvirus associated with a necrotic shock reaction in blueberry. Phytopathology 81 (1991) 210-214
    • (1991) Phytopathology , vol.81 , pp. 210-214
    • MacDonald, S.G.1    Martin, R.R.2    Bristow, P.R.3
  • 17
    • 34548270082 scopus 로고    scopus 로고
    • Demarcation of ilarviruses based on the phylogeny of RNA2-encoded RdRp and a generic ramped annealing RT-PCR
    • Maliogka V.I., Dovas C.I., and Katis N.I. Demarcation of ilarviruses based on the phylogeny of RNA2-encoded RdRp and a generic ramped annealing RT-PCR. Arch. Virol. 152 (2007) 1687-1698
    • (2007) Arch. Virol. , vol.152 , pp. 1687-1698
    • Maliogka, V.I.1    Dovas, C.I.2    Katis, N.I.3
  • 18
    • 0034056944 scopus 로고    scopus 로고
    • Differentiation of Poaceae potyviruses by reverse transcription-polymerase chain reaction and restriction analysis
    • Marie-Jeanne V., Ioos R., Peyre J., Alliot B., and Signoret P. Differentiation of Poaceae potyviruses by reverse transcription-polymerase chain reaction and restriction analysis. J. Phytopathol. 148 (2000) 141-151
    • (2000) J. Phytopathol. , vol.148 , pp. 141-151
    • Marie-Jeanne, V.1    Ioos, R.2    Peyre, J.3    Alliot, B.4    Signoret, P.5
  • 19
    • 77949273048 scopus 로고    scopus 로고
    • Molecular and biological characterization of a novel ilarvirus in bacopa
    • Maroon-Lango C.J., Aebig J., Hammond J., and Hsu H. Molecular and biological characterization of a novel ilarvirus in bacopa. Phytopathology 96 (2006) S73
    • (2006) Phytopathology , vol.96
    • Maroon-Lango, C.J.1    Aebig, J.2    Hammond, J.3    Hsu, H.4
  • 20
    • 1642462833 scopus 로고    scopus 로고
    • Efficient translation of alfamovirus RNAs requires the binding of coat protein dimers to the 3′ termini of the viral RNAs
    • Neeleman L., Linthorst H.J., and Bol J.F. Efficient translation of alfamovirus RNAs requires the binding of coat protein dimers to the 3′ termini of the viral RNAs. J. Gen. Virol. 85 (2004) 231-240
    • (2004) J. Gen. Virol. , vol.85 , pp. 231-240
    • Neeleman, L.1    Linthorst, H.J.2    Bol, J.F.3
  • 21
    • 0032567393 scopus 로고    scopus 로고
    • Analysis of RNA-dependent RNA polymerase structure and function as guided by known polymerase structures and computer predictions of secondary structure
    • O'Reilly E.K., and Kao C.C. Analysis of RNA-dependent RNA polymerase structure and function as guided by known polymerase structures and computer predictions of secondary structure. Virology 252 (1998) 287-303
    • (1998) Virology , vol.252 , pp. 287-303
    • O'Reilly, E.K.1    Kao, C.C.2
  • 22
    • 0033679171 scopus 로고    scopus 로고
    • Simultaneous detection of the three ilarviruses affecting stone fruit trees by nonisotopic molecular hybridisation and multiplex reverse transcription-polymerase chain reaction
    • Saade M., Aparicio F., Sanchez-Navarro J.A., Herranz M.C., Myrta A., Di-Terlizzi B., and Pallas V. Simultaneous detection of the three ilarviruses affecting stone fruit trees by nonisotopic molecular hybridisation and multiplex reverse transcription-polymerase chain reaction. Phytopathology 90 (2000) 1330-1336
    • (2000) Phytopathology , vol.90 , pp. 1330-1336
    • Saade, M.1    Aparicio, F.2    Sanchez-Navarro, J.A.3    Herranz, M.C.4    Myrta, A.5    Di-Terlizzi, B.6    Pallas, V.7
  • 23
    • 0032443889 scopus 로고    scopus 로고
    • Use of degenerate primers in an RT-PCR assay for the identification and analysis of some filamentous viruses, with special reference to clostero- and vitiviruses of the grapevine
    • Saldarelli P., Rowhani A., Routh G., Minafra A., and Digiaro M. Use of degenerate primers in an RT-PCR assay for the identification and analysis of some filamentous viruses, with special reference to clostero- and vitiviruses of the grapevine. Eur. J. Plant Pathol. 104 (1998) 945-950
    • (1998) Eur. J. Plant Pathol. , vol.104 , pp. 945-950
    • Saldarelli, P.1    Rowhani, A.2    Routh, G.3    Minafra, A.4    Digiaro, M.5
  • 25
    • 0142091158 scopus 로고    scopus 로고
    • Viruses in subgroup 2 of the genus Ilarvirus share both serological relationships and characteristics at the molecular level
    • Scott S.W., Zimmerman M.T., and Ge X. Viruses in subgroup 2 of the genus Ilarvirus share both serological relationships and characteristics at the molecular level. Arch. Virol. 148 (2003) 2063-2075
    • (2003) Arch. Virol. , vol.148 , pp. 2063-2075
    • Scott, S.W.1    Zimmerman, M.T.2    Ge, X.3
  • 26
    • 0033968623 scopus 로고    scopus 로고
    • The complete nucleotide sequence of apple mosaic virus (ApMV) RNA 1 and RNA 2: ApMV is more closely related to alfalfa mosaic virus than to other ilarviruses
    • Shiel P.J., and Berger P.H. The complete nucleotide sequence of apple mosaic virus (ApMV) RNA 1 and RNA 2: ApMV is more closely related to alfalfa mosaic virus than to other ilarviruses. J. Gen. Virol. 81 (2000) 273-278
    • (2000) J. Gen. Virol. , vol.81 , pp. 273-278
    • Shiel, P.J.1    Berger, P.H.2
  • 27
    • 7044233323 scopus 로고    scopus 로고
    • Strawberry necrotic shock virus is a distinct virus and not a strain of Tobacco streak virus
    • Tzanetakis I.E., Mackey I.C., and Martin R.R. Strawberry necrotic shock virus is a distinct virus and not a strain of Tobacco streak virus. Arch. Virol. 149 (2004) 2001-2011
    • (2004) Arch. Virol. , vol.149 , pp. 2001-2011
    • Tzanetakis, I.E.1    Mackey, I.C.2    Martin, R.R.3
  • 28
    • 22044455580 scopus 로고    scopus 로고
    • New features in the genus Ilarvirus revealed by the nucleotide sequence of Fragaria chiloensis latent virus
    • Tzanetakis I.E., and Martin R.R. New features in the genus Ilarvirus revealed by the nucleotide sequence of Fragaria chiloensis latent virus. Virus Res. 112 (2005) 32-37
    • (2005) Virus Res. , vol.112 , pp. 32-37
    • Tzanetakis, I.E.1    Martin, R.R.2
  • 29
    • 77949268682 scopus 로고    scopus 로고
    • First report of Blackberry chlorotic ringspot virus in Rubus in the United States
    • Tzanetakis I.E., Postman J.D., and Martin R.R. First report of Blackberry chlorotic ringspot virus in Rubus in the United States. Plant Dis. 91 (2007) 463
    • (2007) Plant Dis. , vol.91 , pp. 463
    • Tzanetakis, I.E.1    Postman, J.D.2    Martin, R.R.3
  • 30
    • 0002091409 scopus 로고
    • Important diseases of Prunus caused by viruses and other graft-transmissible pathogens in California and South Carolina
    • Uyemoto J.K., and Scott S.W. Important diseases of Prunus caused by viruses and other graft-transmissible pathogens in California and South Carolina. Plant Dis. 76 (1992) 5-11
    • (1992) Plant Dis. , vol.76 , pp. 5-11
    • Uyemoto, J.K.1    Scott, S.W.2
  • 31
    • 0034073509 scopus 로고    scopus 로고
    • Variability and molecular typing of the woody-tree infecting prunus necrotic ringspot ilarvirus
    • Vaskova D., Petrzik K., and Karesova R. Variability and molecular typing of the woody-tree infecting prunus necrotic ringspot ilarvirus. Arch. Virol. 145 (2000) 699-709
    • (2000) Arch. Virol. , vol.145 , pp. 699-709
    • Vaskova, D.1    Petrzik, K.2    Karesova, R.3
  • 32
    • 0036282088 scopus 로고    scopus 로고
    • Development of a general potexvirus detection method
    • van der Vlugt R.A.A., and Berendsen M. Development of a general potexvirus detection method. Eur. J. Plant Pathol. 108 (2002) 367-371
    • (2002) Eur. J. Plant Pathol. , vol.108 , pp. 367-371
    • van der Vlugt, R.A.A.1    Berendsen, M.2
  • 33
    • 0031878679 scopus 로고    scopus 로고
    • Ilarviruses encode a cucumovirus-like 2b gene that is absent in other genera within the Bromoviridae
    • Xin H.-W., Ji L.-H., Scott S.W., Symons R.H., and Ding S.-W. Ilarviruses encode a cucumovirus-like 2b gene that is absent in other genera within the Bromoviridae. J. Virol. 72 (1998) 6956-6959
    • (1998) J. Virol. , vol.72 , pp. 6956-6959
    • Xin, H.-W.1    Ji, L.-H.2    Scott, S.W.3    Symons, R.H.4    Ding, S.-W.5
  • 34
    • 0141915241 scopus 로고    scopus 로고
    • American plum line pattern virus is a distinct ilarvirus
    • Zimmerman M.T., and Scott S.W. American plum line pattern virus is a distinct ilarvirus. Acta Hortic. 550 (2001) 221-225
    • (2001) Acta Hortic. , vol.550 , pp. 221-225
    • Zimmerman, M.T.1    Scott, S.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.