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Volumn 145, Issue 4, 2000, Pages 699-709

Variability and molecular typing of the woody-tree infecting prunus necrotic ringspot ilarvirus

Author keywords

[No Author keywords available]

Indexed keywords

COAT PROTEIN GENE; CZECH REPUBLIC; GENE SEQUENCING; GEOGRAPHIC ORIGIN; MOVEMENT PROTEIN; PHYLOGENY; PRUNUS NECROTIC RINGSPOT ILARVIRUS; SEROTYPE; VIRUS GENE; VIRUS INFECTION;

EID: 0034073509     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s007050050664     Document Type: Article
Times cited : (38)

References (28)
  • 1
    • 0032525294 scopus 로고    scopus 로고
    • RNA determinants of a specific RNA-coat protein peptide interaction in alfalfa mosaic virus: Conservation of homologous features in Ilarvirus RNAs
    • 1. Ansel-McKinney P, Gehrke L (1998) RNA determinants of a specific RNA-coat protein peptide interaction in alfalfa mosaic virus: conservation of homologous features in Ilarvirus RNAs. J Mol Biol 278: 767-785.
    • (1998) J Mol Biol , vol.278 , pp. 767-785
    • Ansel-McKinney, P.1    Gehrke, L.2
  • 2
    • 0029811379 scopus 로고    scopus 로고
    • A plant viral coat protein RNA binding consensus sequence contains a crucial arginine
    • 2. Ansel-McKinney P, Scott SW, Swanson M, Ge X, Gehrke L (1996) A plant viral coat protein RNA binding consensus sequence contains a crucial arginine. EMBO J 15: 5077-5084
    • (1996) EMBO J , vol.15 , pp. 5077-5084
    • Ansel-McKinney, P.1    Scott, S.W.2    Swanson, M.3    Ge, X.4    Gehrke, L.5
  • 4
    • 0032904782 scopus 로고    scopus 로고
    • Alfalfa mosaic virus and ilarviruses: Involvement of coat protein in multiple steps of the replication cycle
    • 4. Bol JF (1999) Alfalfa mosaic virus and ilarviruses: involvement of coat protein in multiple steps of the replication cycle. J Gen Virol 80: 1089-1102
    • (1999) J Gen Virol , vol.80 , pp. 1089-1102
    • Bol, J.F.1
  • 5
    • 0001028820 scopus 로고
    • Detection of Prunus necrotic ringspot virus serotypes in herbaceous and Prunus host with a complementary RNA probe
    • 5. Crosslin JM, Hammond RW, Hammerschlag FA (1992) Detection of Prunus necrotic ringspot virus serotypes in herbaceous and Prunus host with a complementary RNA probe. Plant Dis 76: 1132-1136
    • (1992) Plant Dis , vol.76 , pp. 1132-1136
    • Crosslin, J.M.1    Hammond, R.W.2    Hammerschlag, F.A.3
  • 6
    • 0000138153 scopus 로고
    • Biophysical differences among Prunus necrotic ringspot ilarviruses
    • 6. Crosslin JM, Mink GI (1992) Biophysical differences among Prunus necrotic ringspot ilarviruses. Phytopathology 82: 200-206
    • (1992) Phytopathology , vol.82 , pp. 200-206
    • Crosslin, J.M.1    Mink, G.I.2
  • 7
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • 7. Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17: 368-376
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 8
    • 0003437299 scopus 로고
    • Distributed by the author. Department of Genetics, University of Washington, Seattle
    • 8. Felsenstein J (1993) PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle
    • (1993) PHYLIP (Phylogeny Inference Package) Version 3.5c
    • Felsenstein, J.1
  • 9
    • 0029047618 scopus 로고
    • Prunus necrotic ringspot ilavirus: Nucleotide sequence of RNA3 and the relationship to other ilarviruses based on coat protein comparison
    • 9. Guo D, Maiss E, Adam G, Casper R (1995) Prunus necrotic ringspot ilavirus: nucleotide sequence of RNA3 and the relationship to other ilarviruses based on coat protein comparison. J Gen Virol 76: 1073-1079
    • (1995) J Gen Virol , vol.76 , pp. 1073-1079
    • Guo, D.1    Maiss, E.2    Adam, G.3    Casper, R.4
  • 10
    • 0028934763 scopus 로고
    • The complete nucleotide sequence of RNA 3 of a peach isolate of Prunus necrotic ringspot virus
    • 10. Hammond RW, Crosslin JM (1995) The complete nucleotide sequence of RNA 3 of a peach isolate of Prunus necrotic ringspot virus. Virology 208: 349-353
    • (1995) Virology , vol.208 , pp. 349-353
    • Hammond, R.W.1    Crosslin, J.M.2
  • 11
    • 0031871854 scopus 로고    scopus 로고
    • Virulence and molecular polymorphism of Prunus necrotic ringspot virus isolates
    • 11. Hammond RW, Crosslin JM (1998) Virulence and molecular polymorphism of Prunus necrotic ringspot virus isolates. J Gen Virol 79: 1815-1823
    • (1998) J Gen Virol , vol.79 , pp. 1815-1823
    • Hammond, R.W.1    Crosslin, J.M.2
  • 12
    • 0032408320 scopus 로고    scopus 로고
    • A core hairpin is essential for subgenomic RNA synthesis in Alfalfa mosaic alfamovirus and is conserved in other Bromoviridae
    • 12. Jaspars EMJ (1998) A core hairpin is essential for subgenomic RNA synthesis in Alfalfa mosaic alfamovirus and is conserved in other Bromoviridae. Virus Genes 17: 233-242
    • (1998) Virus Genes , vol.17 , pp. 233-242
    • Jaspars, E.M.J.1
  • 13
    • 0029804192 scopus 로고    scopus 로고
    • Identification and application of the concepts important for accurate and reliable protein secondary structure prediction
    • 13. King RD, Sternberg MJ (1998) Identification and application of the concepts important for accurate and reliable protein secondary structure prediction. Protein Sci 5: 2298-2310
    • (1998) Protein Sci , vol.5 , pp. 2298-2310
    • King, R.D.1    Sternberg, M.J.2
  • 15
    • 0033591465 scopus 로고    scopus 로고
    • Expanded sequence dependence of thermodynamic parameters provides robust prediction of RNA secondary structure
    • 15. Mathews DH, Sabina J, Zuker M, Turner DH (1999) Expanded sequence dependence of thermodynamic parameters provides robust prediction of RNA secondary structure. J Mol Biol 288: 911-940
    • (1999) J Mol Biol , vol.288 , pp. 911-940
    • Mathews, D.H.1    Sabina, J.2    Zuker, M.3    Turner, D.H.4
  • 16
    • 0003104142 scopus 로고
    • Three serotypes of Prunus necrotic ringspot virus isolated from rugose mosaic-diseased sweet cherry in Washington
    • 16. Mink GI, Howell WE, Cole A, Regev S (1987) Three serotypes of Prunus necrotic ringspot virus isolated from rugose mosaic-diseased sweet cherry in Washington. Plant Dis 71: 91-93
    • (1987) Plant Dis , vol.71 , pp. 91-93
    • Mink, G.I.1    Howell, W.E.2    Cole, A.3    Regev, S.4
  • 17
    • 0027957393 scopus 로고
    • Fast DNAml: A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood
    • 17. Olsen GJ, Matsuda H, Hagstrom R, Overbeek R (1994) fastDNAml: A tool for construc-tion of phylogenetic trees of DNA sequences using maximum likelihood. Comput Appl Biosci 10: 41-48
    • (1994) Comput Appl Biosci , vol.10 , pp. 41-48
    • Olsen, G.J.1    Matsuda, H.2    Hagstrom, R.3    Overbeek, R.4
  • 18
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: An applications to display phylogenetic trees on personal computers
    • 18. Page RDM (1996) TREEVIEW: An applications to display phylogenetic trees on personal computers. Comput Appl Biosci 12: 357-358
    • (1996) Comput Appl Biosci , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 19
    • 0023055775 scopus 로고
    • New hydrophilicity scale derived from high-performance liquid chromatography peptide retention data: Correlation of predicted surface residues with antigenicity and X-ray-derived accessible sites
    • 19. Parker JM, Guo D, Hodges RS (1986) New hydrophilicity scale derived from high-performance liquid chromatography peptide retention data: correlation of predicted surface residues with antigenicity and X-ray-derived accessible sites. Biochemistry 25: 5425-5432
    • (1986) Biochemistry , vol.25 , pp. 5425-5432
    • Parker, J.M.1    Guo, D.2    Hodges, R.S.3
  • 20
    • 0028229081 scopus 로고
    • Nucleotide sequence of apple mosaic ilarvirus RNA-4
    • 20. Sánchez-Navarro JA, Pallás V (1994) Nucleotide sequence of apple mosaic ilarvirus RNA-4. J Gen Virol 75: 1441-1445
    • (1994) J Gen Virol , vol.75 , pp. 1441-1445
    • Sánchez-Navarro, J.A.1    Pallás, V.2
  • 21
    • 0030938801 scopus 로고    scopus 로고
    • Evolutionary relationships in the ilarviruses: Nucleotide sequence of prunus necrotic ringspot virus RNA 3
    • 21. Sánchez-Navarro JA, Pallás V (1997) Evolutionary relationships in the ilarviruses: nucleotide sequence of prunus necrotic ringspot virus RNA 3. Arch Virol 142: 749-763
    • (1997) Arch Virol , vol.142 , pp. 749-763
    • Sánchez-Navarro, J.A.1    Pallás, V.2
  • 22
    • 0031976228 scopus 로고    scopus 로고
    • The coat proteins and putative movement proteins of isolates of prunus necrotic ringspot virus from different host species and geographic origins are extensively conserved
    • 22. Scott SW, Zimmerman MT, Ge X, Mackenzie DJ (1998) The coat proteins and putative movement proteins of isolates of prunus necrotic ringspot virus from different host species and geographic origins are extensively conserved. Eur J Plant Pathol 104: 155-161
    • (1998) Eur J Plant Pathol , vol.104 , pp. 155-161
    • Scott, S.W.1    Zimmerman, M.T.2    Ge, X.3    Mackenzie, D.J.4
  • 23
    • 0031924399 scopus 로고    scopus 로고
    • Viral coat protein peptides with limited sequence homology bind similar domains of alfalfa mosaic virus and tobacco streak virus RNAs
    • 23. Swanson MM, Ansel-McKinney P, Houser-Scott F, Yusibov V, Loesch-Fries LS, Gehrke L (1998) Viral coat protein peptides with limited sequence homology bind similar domains of alfalfa mosaic virus and tobacco streak virus RNAs. J Virol 72: 3227-3234
    • (1998) J Virol , vol.72 , pp. 3227-3234
    • Swanson, M.M.1    Ansel-McKinney, P.2    Houser-Scott, F.3    Yusibov, V.4    Loesch-Fries, L.S.5    Gehrke, L.6
  • 24
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progessive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • 24. Thomson JD, Higgins DC, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progessive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thomson, J.D.1    Higgins, D.C.2    Gibson, T.J.3
  • 25
    • 0002091409 scopus 로고
    • Important disease of Prunus caused by viroses and other graft-transmissible pathogens in California and South Carolina
    • 25. Uemoto JK, Scott SW (19992) Important disease of Prunus caused by viroses and other graft-transmissible pathogens in California and South Carolina. Plant Dis 76: 5-11
    • (1992) Plant Dis , vol.76 , pp. 5-11
    • Uemoto, J.K.1    Scott, S.W.2
  • 26
    • 0028022045 scopus 로고
    • Early and late functions of alfalfa mosaic virus coat protein can be mutated separately
    • 26. van der Vossen EAG, Neeleman L, Bol JF (1994) Early and late functions of alfalfa mosaic virus coat protein can be mutated separately. Virology 202: 891-903
    • (1994) Virology , vol.202 , pp. 891-903
    • Van Der Vossen, E.A.G.1    Neeleman, L.2    Bol, J.F.3
  • 27
    • 0028834373 scopus 로고
    • Characterisation of sequences con-trolling the synthesis of Alfalfa mosaic virus subgenomic RNA in vivo
    • 27. van der Vossen EAG, Notenboom T, Bol JF (1995) Characterisation of sequences con-trolling the synthesis of Alfalfa mosaic virus subgenomic RNA in vivo. Virology 212: 663-672
    • (1995) Virology , vol.212 , pp. 663-672
    • Van Der Vossen, E.A.G.1    Notenboom, T.2    Bol, J.F.3
  • 28
    • 0002287019 scopus 로고    scopus 로고
    • Algorithms and thermodynamics for RNA secondary structure prediction
    • Barciszewski J, Clark BFC (eds) NATO ASI Series, Kluwer Academic Publishers
    • 28. Zuker M, Mathews DH, Turner DH (1999) Algorithms and thermodynamics for RNA secondary structure prediction. In: Barciszewski J, Clark BFC (eds) A practical guide in RNA biochemistry and biotechnology. NATO ASI Series, Kluwer Academic Publishers
    • (1999) A Practical Guide in RNA Biochemistry and Biotechnology
    • Zuker, M.1    Mathews, D.H.2    Turner, D.H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.