Detection and molecular characterization of gene 3 and 5 of Turkey coronavirus from Turkeys with severe enteritis in Brazil

Avian Diseases

Volumn 53, Issue 3, 2009, Pages 356-362

  Bunger, Amarilis N D'Elboux ^a   Chacón, Jorge Luis ^a   Jones, Richard C ^b   Ferreira, Antonio J Piantino ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b UNIVERSITY OF LIVERPOOL   (United Kingdom)

Author keywords

Gene 3; Gene 5; Molecular characterization; Phylogenetic analysis; RT PCR; Turkey coronavirus

Indexed keywords

VIRUS DNA;

ANIMAL; ANIMAL DISEASE; ARTICLE; BRAZIL; CORONAVIRUS; EPIDEMIC; GENE EXPRESSION REGULATION; GENETICS; PHYLOGENY; PHYSIOLOGY; TRANSMISSIBLE ENTERITIS OF TURKEYS; TURKEY (BIRD); VIROLOGY; VIRUS GENE;

ANIMALS; BRAZIL; CORONAVIRUS, TURKEY; DISEASE OUTBREAKS; DNA, VIRAL; ENTERITIS, TRANSMISSIBLE, OF TURKEYS; GENE EXPRESSION REGULATION, VIRAL; GENES, VIRAL; PHYLOGENY; TURKEYS;

AVIAN INFECTIOUS BRONCHITIS VIRUS; CORONAVIRUS; PHEASANT CORONAVIRUS; TURKEY CORONAVIRUS;

EID: 77649260310     PISSN: 00052086     EISSN: None     Source Type: Journal    
DOI: 10.1637/8507-103108-Reg.1     Document Type: Article

References (36)

1. Bredenbeek, P. J., A. F. Noten, M. C. Horzinek, and W. J. Spaan. Identification and stability of a 30-KDa nonstructural protein encoded by mRNA 2 of mouse hepatitis virus in infected cells. Virology 175:303-306. 1990.
2. Breslin, J. J., L. G. Smith, F. J. Fuller, and J. S. Guy. Sequence analysis of the turkey coronavírus nucleocapsid gene and 39 untranslated region identifies the virus as a close relative of infectious bronchitis virus. Virus Res. 65:187-198. 1999.
3. Brown, P. T., A. P. Garcia, and L. Kelley. Spiking mortality of turkey poults: experimental reproduction in isolation facilities. Avian Dis. 41:604-609. 1997.
4. Carver, D. K., J. P. Vaillancourt, M. Stringham, J. S. Guy, and H. J. Barnes. Mortality patterns associated with poult enteritis mortality syndrome (PEMS) and coronaviral enteritis in turkey flocks raised in PEMS-affected regions. Avian Dis. 45:985-991. 2001.
5. Cavanagh, D. Coronaviruses in poultry and other birds. Avian Pathol. 34:439-448. 2005.
6. Cavanagh, D., K. Mawditt, M. Sharma, S. E. Drury, H. L. Ainsworth, P. Britton, and R. E. Gough. Detection of a coronavirus from turkey poults in Europe genetically relates to infectious bronchitis virus of chickens. Avian Pathol. 30:365-378. 2001.
7. Cavanagh, D., K. Mawditt, D. B. Welchman, P. Britton, and R. E. Gough. Coronavíruses from pheasants (Phasianus colchicus) are genetically closely related to coronaviruses of domestic fowl (infectious bronchitis virus) and turkeys. Avian Pathol. 31:181-193. 2002.
8. Circella, E., A. Camarda, V. Martella, G. Bruni, A. Lavazza, and C. Buonavoglia. Coronavirus associated with an enteric syndrome on a quail farm. Avian Pathol. 36:251-258. 2007.
9. De Haan, C. A., P. S. Masters, X. Shen, S. Weiss, and P. J. Rottier. The group-specific murine coronavirus genes are not essential, but their deletion, by reverse genetics, is attenuating in the natural host. Virology 296:177-189. 2002.
10. Gomaa, M. H., J. R. Barta, D. Ojkic, and D. Yoo. Complete genomic sequence of turkey coronavirus. Virus Res. 135:237-246. 2008.
11. Goodwin, M. A., J. Brown, E. C. Player, W. L. Steffens, D. Hermes, and M. A. Dekich. Fringed membranous particles and viruses in faeces from healthy turkey poults and from poults with putative poult enteritis complex/spiking mortality. Avian Pathol. 24:497-505. 1995.
12. Guy, J. S. Turkey coronavirus is more closely related to avian infectious bronchitis virus than mammalian coronavirus: a review. Avian Dis. 41:583-590. 1997.
13. Guy, J. S. Turkey coronavirus enteritis. In: Diseases of poultry, 12th ed. Saif, Y. M., A. M. Fadly, J. R. Glisson, L. R. McDougald, L. K. Nolan, and D. E. Swayne, eds. Blackwell Publishing, Ames, IA. pp. 330-338. 2008.
14. Guy, J. S., J. Barnes, L. G. Smith, and J. Breslin. Antigenic characterization of a turkey coronavírus identified in poult enteritis and mortality syndrome affected turkeys. Avian Pathol. 29:207-212. 2000.
15. Guy, J. S., L. G. Smith, J. J. Breslin, J. P. Vaillancourt, and H. J. Barnes. High mortality and growth depression experimentally produced in young turkeys by dual infection with enteropathogenic Escherichia coli and turkey coronavirus. Avian Dis. 44:105-113. 2000.
16. Herrewegh, A. A., H. Vennema, M. C. Horzinek, P. J. Rottier, and R. J. De Groot. The molecular genetics of feline coronaviruses: comparative sequence analysis of the ORF 7a/7b transcription unit of different biotypes. Virology 212:622-631. 1995.
17. Hodgson, T., P. Britton, and D. Cavanagh. Neither the RNA nor proteins of open reading frames 3a and 3b of the coronavirus infectious bronchitis virus are essential for replication. J. Virol. 80:296-305. 2006.
18. Ito, N., E. C. Mossel, K. Narayanan, V. L. Popov, C. Huang, T. Inoue, C. J. Peters, and S. Makino. Severe acute respiratory syndrome coronavirus 3a protein is a viral structural protein. J. Virol. 79:3182-3186. 2005.
19. Jia, W., and S. A. Naqi. Sequence analysis of gene 3, gene 4 and gene 5 of avian infectious bronchitis virus strain CU-T2. Gene 189:189-193. 1997.
20. Koci, M. D., B. S. Seal, and S. Schultz-Cherry. Molecular characterization of an avian astrovirus. J. Virol. 74:6173-6177. 2000.
21. Lin, T. L., C. C. Loa, and C. C. Wu. Existence of gene 5 indicates close genomic relationship of turkey coronavirus to infectious bronchitis virus. Acta Virol. 46:1107-1116. 2002.
22. Lin, T. L., C. C. Loa, and C. C. Wu. Complete sequences of 3′-end coding region for structural protein genes of turkey coronavirus. Virus Res. 106:61-70. 2004.
23. Loa, C. C., T. L. Lin, C. C. Wu, T. A. Bryan, T. A. Hooper, and D. L. Schrader. Differential detection of turkey coronavirus, infectious bronchitis virus, and bovine coronavius by a multiplex polymerase chain reaction. J. Virol. Methods 131:86-91. 2006.
24. Loa, C. C., C. C. Wu, and T. L. Lin. Comparison of 3′-end encoding regions of turkey coronavirus isolates from Indiana, North Carolina, and Minnesota with chicken infectious bronchitis coronavius strains. Intervirol. 49:230-238. 2006.
25. Möstl, K. Coronaviridae, pathogenetic and clinical aspects: an update. Comp. Immunol. Microbiol. Infect. Dis. 13:169-180. 1990.
26. Pantin-Jackwood, M. J., J. M. Day, M. W. Jackwood, and E. Spackman. Enteric viruses detected by molecular methods in commercial chicken and turkey flocks in the United States between 2005 and 2006. Avian Dis. 52:235-244. 2008.
27. Pantin-Jackwood, M. J., E. Spackman, J. M. Day, and D. Rives. Periodic monitoring of commercial turkeys for enteric viruses indicates continuous presence of astrovirus and rotavirus on the farms. Avian Dis. 51:674-680. 2007.
28. Schultz-Cherry, S., D. R. Kapczynski, V. M. Simmons, M. D. Koci, C. Brown, and H. J. Barnes. Identifying agent(s) associated with poult enteritis mortality syndrome: importance of the thymus. Avian Dis. 44:256-265. 2000.
29. Shen, S., Z. L. Wen, and D. X. Liu. Emergence of a coronavirus infectious bronchitis virus mutant with a truncated 3b gene: functional characterization of the 3b protein in pathogenesis and replication. Virology 311:16-27. 2003.
30. Spackman, E., D. Kapczynski, and H. Sellers. Multiplex real-time reverse transcription-polymerase chain reaction for the detection of three viruses associated with poult enteritis complex: turkey astrovirus, turkey coronavirus, and turkey reovirus. Avian Dis. 49:86-91. 2005.
31. Teixeira, M. C. B., M. C. R. Luvizotto, H. F. Ferrari, A. R. Mendes, S. E. L. Silva, and T. C. Cardoso. Detection of turkey coronavirus in commercial turkey poults in Brasil. Avian Pathol. 36:29-33. 2007.
32. Villarreal, L. Y. B., M. S. Assayag, P. E. Brandõo, J. L. V. Chacón, A. N. D. Bunger, C. S. A. Ferreira, C. R. Gomes, R. C. Jones, and A. J. P. Ferreira. Identification of turkey astrovirus and turkey coronavirus in an outbreak of poultry enteritis and mortality syndrome. Braz. J. Poult. Sci. 8:131-135. 2006.
33. Wesley, R. D., R. D. Woods, and A. K. Cheung. Genetic basis for the pathogenesis of transmissible gastroenteritis virus. J. Virol. 64:4761-4766. 1990.
34. Worthington, K. J., R. J. Currie, and R. C. Jones. A reverse transcriptase-polymerase chain reaction survey of infectious bronchitis virus genotypes in Western Europe from 2002 to 2006. Avian Pathol. 37:247-257. 2008.
35. Yu, M., M. M. Ismail, M. A. Qureshi, R. N. Dearth, H. J. Barnes, and Y. M. Saif. Viral agents associated with poult enteritis and mortality syndrome: the role of a small round virus and a turkey coronavirus. Avian Dis. 44:297-304. 2000.
36. Zanella, A., A. Lavazza, R. Marchi, A. M. Martin, and F. Paganelli. Avian infectious bronchitis: characterization of new isolates from Italy. Avian Dis. 47:180-185. 2003.