A prototype forecasting system for bird-borne disease spread in North America based on migratory bird movements

Epidemics

Volumn 1, Issue 4, 2009, Pages 240-249

  Peterson, A Townsend ^a   Andersen, Michael J ^a   Bodbyl Roels, Sarah ^a   Hosner, Pete ^a   Nyári, Árpád ^a   Oliveros, Carl ^a   Papeş, Monica ^a  

^a UNIVERSITY OF KANSAS   (United States)

Author keywords

Birds; Forecasting; Influenza; Japanese encephalitis; Migration; West Nile Virus

Indexed keywords

ARTICLE; BIRD DISEASE; BREEDING; ECOLOGICAL NICHE; FLAVIVIRUS; GEOGRAPHIC DISTRIBUTION; INFLUENZA VIRUS A; INFLUENZA VIRUS A H5N1; MIGRATING BIRD; MIGRATORY SPECIES; NONHUMAN; NORTH AMERICA; PRIORITY JOURNAL; RISK ASSESSMENT; SEASONAL VARIATION; SIMULATION; SPECIES DIVERSITY;

ALGORITHMS; ANIMAL MIGRATION; ANIMALS; BIRD DISEASES; BIRDS; DATABASES, FACTUAL; ECOLOGY; GEOGRAPHIC INFORMATION SYSTEMS; NORTH AMERICA; SEASONS; WEST NILE FEVER; WEST NILE VIRUS;

EID: 77649193081     PISSN: 17554365     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.epidem.2009.11.003     Document Type: Article

References (60)

1. Alerstam T., Bäckman J., Gudmundsson G.A., Hedenstöm A., Henningsson S.S., Karlsson H., Rosén M., and Strandberg R. A polar system of intercontinental bird migration. Proc. R. Soc. B 274 (2007) 2523-2530
2. Anderson R.P., Lew D., and Peterson A.T. Evaluating predictive models of species' distributions: criteria for selecting optimal models. Ecol. Mod. 162 (2003) 211-232
3. AOU. Check-list of North American Birds. 7th ed (1998), American Ornithologists' Union, Washington, D.C
4. Avise J.C. Phylogeography: The History and Formation of Species. 3rd Ed (2000), Harvard University Press, Cambridge, Mass
5. Barrowclough G.F. Biochemical studies of microevolutionary processes. In: Brush A.H., and Clark G.A.J. (Eds). Perspectives in Ornithology (1983), Cambridge University Press, Cambridge 223-270
6. BBS, 2006. North American Breeding Bird Survey. U.S. Geological Survey, http://www.mp2-pwrc.usgs.gov/bbs/, Washington, D.C.
7. Betancourt E.F. West Nile virus-is Castro's bioterrorism threat being ignored?. Med. Sentin. 6 (2001) 121-122
8. Bird Banding Laboratory, 2009. The North American Bird Banding Program; http://www.pwrc.usgs.gov/bbl/. Patuxent Wildlife Research Center, Laurel, Maryland.
9. Chen H., Smith G.J.D., Zhang S.Y., Qin K., Wang J., Li K.S., Webster R.G., Peiris J.S.M., and Guan Y. H5N1 virus outbreak in migratory waterfowl. Nature 436 (2005) 191-192
10. Cornell Laboratory of Ornithology, and National Audubon Society, 2009. eBird: An Online Database of Bird Distribution and Abundance; http://www.avianknowledge.net. Avian Knowledge Network, Ithaca, New York.
11. Diaz L.A., Komar N., Visintin A., Juri M.J.D., Stein M., Allende R.L., Spinsanti L., Konigheim B., Aguilar J., Laurito M., Almirón W., and Contigiani M. West Nile virus in birds. Argentina Emerg. Inf. Dis. 14 (2008) 689-691
12. Elith J., Graham C.H., Anderson R.P., Dudik M., Ferrier S., Guisan A., Hijmans R.J., Huettman F., Leathwick J.R., Lehmann A., Li J., Lohmann L.G., Loiselle B.A., Manion G., Moritz C., Nakamura M., Nakazawa Y., Overton J.M., Peterson A.T., Phillips S.J., Richardson K., Scachetti-Pereira R., Schapire R.E., Soberón J., Williams S.E., Wisz M.S., and Zimmermann N.E. Novel methods improve prediction of species' distributions from occurrence data. Ecography 29 (2006) 129-151
13. Fielding A.H., and Bell J.F. A review of methods for the assessment of prediction errors in conservation presence/absence models. Env. Cons. 24 (1997) 38-49
14. Flint P.L. Applying the scientific method when assessing the influence of migratory birds on the dispersal of H5N1. Virol. J. 4 (2007) 132-134
15. Gilbert M., Xiao X.M., Domenech J., Lubroth J., Martin V., and Slingenbergh J. Anatidae migration in the Western Palearctic and spread of highly pathogenic avian influenza H5N1 virus. Emerg. Inf. Dis. 12 (2006) 1650-1656
16. Gómez-Díaz E., and González-Solís J. Geographic assignment of seabirds to their origin: combining morphologic, genetic, and biogeochemical analyses. Ecol. Appl. 17 (2007) 1484-1498
17. Gubler D.J. Emerging infections: the continuing spread of West Nile Virus in the Western Hemisphere. Clin. Inf. Dis. 45 (2007) 1039-1046
18. Guisan A., and Zimmermann N.E. Predictive habitat distribution models in ecology. Ecol. Model. 135 (2000) 147-186
19. Henningsson S.S., and Alerstam T. Barriers and distances as determinants for the evolution of bird migration links: the arctic shorebird system. Proc. Roy. Soc. B 272 (2005) 2251-2258
20. Hobson K.A. Tracing origins and migration of wildlife using stable isotopes: a review. Oecologia 120 (1999) 314-326
21. Hobson K.A., and Robbins M.B. Origins of late-breeding nomadic Sedge Wrens in North America: limitations and potential of hydrogen-isotope analyses of soft tissue. Condor 111 (2009) 188-192
22. Howell S.N.G., and Webb S. A Guide to the Birds of Mexico and Northern Central America (1995), Oxford University Press, Oxford
23. Kelly J.F., Ruegg K.C., and Smith T.B. Combining isotopic and genetic markers to identify breeding origins of migrant birds. Ecol. Appl. 15 (2005) 1487-1494
24. Kilpatrick A.M., Chmura A.A., Gibbons D.W., Fleischer R.C., Marra P.P., and Daszak P. Predicting the global spread of H5N1 avian influenza. Proc. Natl. Acad. Sci. U. S. A. 103 (2006) 19368-19373
25. Koehler A.V., Pearce J.M., Flint P.L., and Franson C. Genetic evidence of intercontinental movement of avian influenza in a migratory bird: the Northern Pintail (Anas acuta). Mol. Ecol. 17 (2008) 4754-4762
26. Komar O., Robbins M.B., Guzmán-Contreras G., Benz B.W., Klenk K., Blitvich B.J., Marlenee N.L., Burkhalter K.L., Beckett S., Gonzálvez G., Peña C.J., Peterson A.T., and Komar N. West Nile virus survey of birds and mosquitoes in the Dominican Republic. Vect. Borne Zoon. Dis. 5 (2005) 120-126
27. Krauss S., Obert C.A., Franks J., Walker D., Jones K., Seller P., Niles L., Pryor S.P., Obenaur J.C., Naeve C.W., Widjaja L., Webby R.J., and Webster R.G. Influenza in migratory birds and evidence of limited intercontinental virus exchange. PLoS Path. 3 (2007) e167
28. Langin K., Reudink M., Marra P., Norris D., Kyser T., and Ratcliffe L. Hydrogen isotopic variation in migratory bird tissues of known origin: implications for geographic assignment. Oecologia 152 (2007) 449-457
29. Lovette I.J., Clegg S.M., and Smith T.B. Limited utility of mtDNA markers for determining connectivity among breeding and overwintering locations in three Neotropical migrant birds. Cons. Biol. 18 (2004) 156-166
30. Marra P.P., Hobson K.A., and Holmes R.T. Linking winter and summer events in a migratory bird by using stable-carbon isotopes. Science 282 (1998) 1884-1886
31. Martell M.S., Henny C.J., Nye P.E., and Solensky M.J. Fall migration routes, timing, and wintering sites of North American ospreys as determined by satellite telemetry. Condor 103 (2001) 715-724
32. McCallum H.I., Roshier D.A., Tracey J.P., Joseph L., and Heinsohn R. Will Wallace's Line save Australia from avian influenza?. Ecol. Soc. 13 (2008) 41
33. McNyset K.M., and Blackburn J.K. Does GARP really fail miserably? A response to Stockman et al. (2006). Div. Distr. 12 (2006) 782-786
34. National Audubon Society, 2002. The Christmas Bird Count Historical Results [online]. http://www.audubon.org/bird/cbc [accessed August 2003].
35. Navarro-Sigüenza A.G., Peterson A.T., and Gordillo-Martínez A. Museums working together: the atlas of the birds of Mexico. Bull. Br. Ornithol. Club 123A (2003) 207-225
36. Nelson M.I., Simonsen L., Viboud C., Miller M.A., and Holmes E.C. Phylogenetic analysis reveals the global migration of seasonal influenza A viruses. PLoS Path. 3 (2007) e131
37. Nett R.J., Campbell G.L., and Reisen W.K. Potential for the emergence of Japanese Encephalitis Virus in California. Vector-Borne Zoon. Dis. 9 (2009) 511-517
38. Oppel S., Powell A.N., and Dickson D.L. Timing and distance of King Eider migration and winter movements. Condor 110 (2008) 296-305
39. Peterson, A.T., in press. Prototype system for tracking and forecasting highly pathogenic H5N1 avian influenza spread in North America. Stud. Av. Biol.
40. Peterson A.T., and Navarro-Sigüenza A.G. Computerizing bird collections and sharing collection data openly: why bother?. Bonn. Zool. Beitr. 51 (2003) 205-212
41. Peterson A.T., and Williams R. Risk mapping of highly pathogenic avian influenza distribution and spread. Ecol. Soc. 13 (2008) 15
42. Peterson A.T., Papeş M., and Kluza D.A. Predicting the potential invasive distributions of four alien plant species in North America. Weed Sci. 51 (2003) 863-868
43. Peterson A.T., Vieglais D.A., and Andreasen J.K. Migratory birds modeled as critical transport agents for West Nile Virus in North America. Vector-Borne Zoon. Dis. 3 (2003) 27-37
44. Peterson A.T., Benz B.W., and Papeş M. Highly pathogenic H5N1 avian influenza: entry pathways into North America via bird migration. PLoS ONE 2 (2007) e261
45. Peterson A.T., Papeş M., and Eaton M. Transferability and model evaluation in ecological niche modeling: a comparison of GARP and Maxent. Ecography 30 (2007) 550-560
46. Peterson A.T., Papeş M., and Soberón J. Rethinking receiver operating characteristic analysis applications in ecological niche modelling. Ecol. Model. 213 (2008) 63-72
47. Peterson A.T., Bush S.E., Spackman E., Swayne D.E., and Ip H.S. Influenza A virus infections in Chinese landbirds. Emerg. Inf. Dis. 14 (2009) 1644-1646
48. Post D., Layman C., Arrington D., Takimoto G., Quattrochi J., and Montaña C. Getting to the fat of the matter: models, methods and assumptions for dealing with lipids in stable isotope analyses. Oecologia 152 (2007) 179-189
49. Reddy S., and Dávalos L.M. Geographical sampling bias and its implications for conservation priorities in Africa. J. Biogeogr. 30 (2003) 1719-1727
50. Reed K.D., Meece J.K., Henkel J.S., and Shukla S.K. Birds, migration and emerging zoonoses: West Nile Virus, Lyme disease, influenza A and enteropathogens. Clin. Med. Res. 1 (2003) 5-12
51. Ridgely, R.S., Allnutt, T.F., Brooks, T., McNichol, D.K., Mehlman, D.W., Young, B.E., Zook, J.R., 2005. Digital Distribution Maps of the Birds of the Western Hemisphere, version 2.1. NatureServe, Arlington, Virginia.
52. Soberón J., and Peterson A.T. Biodiversity informatics: managing and applying primary biodiversity data. Philos. Trans. R. Soc. Lond. B 359 (2004) 689-698
53. Soberón J., and Peterson A.T. Interpretation of models of fundamental ecological niches and species' distributional areas. Biodiv. Inf. 2 (2005) 1-10
54. Stockwell D.R.B., and Peters D.P. The GARP modelling system: problems and solutions to automated spatial prediction. Int. J. Geogr. Inf. Sci. 13 (1999) 143-158
55. Vijayanand P., Wilkins E., and Woodhead M. Severe acute respiratory syndrome (SARS): a review. Clin. Med. 4 (2004) 152-160
56. Weber T.P., and Stilianakis N.I. Ecologic immunology of avian influenza (H5N1) in migratory birds. Emerg. Inf. Dis. 13 (2007) 1139-1143
57. Webster M.S., Marra P.P., Haig S.M., Bensch S., and Holmes R.T. Links between worlds: unraveling migratory connectivity. Trends Ecol. Evol. 17 (2002) 76-83
58. Webster R.G., Bean W.J., Gorman O.T., Chambers T.M., and Kawaoka Y. Evolution and ecology of influenza A viruses. Microbiol. Rev. 56 (1992) 152-179
59. Wink M. Use of DNA markers to study bird migration. J. Ornithol. 147 (2006) 234-244
60. Wright S. Evolution and the Genetics of Populations. Variability Within and Among Natural Populations Volume 4 (1978), University of Chicago Press, Chicago