Comparison of dengue-1 virus envelope glycoprotein gene sequences from French Polynesia

American Journal of Tropical Medicine and Hygiene

Volumn 71, Issue 4, 2004, Pages 478-484

  Laille, Manola ^a   Roche, Claudine ^a  

^a INSTITUT LOUIS MALARDÉ   (French Polynesia)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOTIDE; VIRUS ENVELOPE PROTEIN; VIRUS GLYCOPROTEIN;

ARTICLE; COMPARATIVE STUDY; DENGUE VIRUS; ENVELOPE GENE; EPIDEMIC; FRENCH POLYNESIA; GENE SEQUENCE; GENETIC VARIABILITY; GENOTYPE; INDONESIA; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; SEQUENCE ANALYSIS; SOUTHEAST ASIA; VIRUS GENE; VIRUS GENOME; VIRUS ISOLATION; VIRUS STRAIN;

DENGUE VIRUS; RNA VIRUSES;

EID: 7644225029     PISSN: 00029637     EISSN: None     Source Type: Journal    
DOI: 10.4269/ajtmh.2004.71.478     Document Type: Article

References (35)

1. Monath TP, 1994. Dengue: the risk to developed and developing countries. Proc Natl Acad Sci USA 91: 2395-2400.
2. Gubler DJ, 1997. Its history and resurgence as a global public health problem. Gubler DJ, Kuno G, eds. Dengue and Dengue Hemorrhagic Fever. London: CAB International, 1-22.
3. McBride WJ, Bielefeldt-Ohmann H, 2000. Dengue viral infections: pathogenesis and epidemiology. Microbes Infect 2: 1041-1050.
4. Gubler DJ, Meltzer M, 1999. Impact of dengue/dengue hemorragic fever on the developing world. Adv Virus Res 53: 35-70.
5. Moreau JP, Rosen L, Saugrain J, Laigret J, 1973. An epidemic of dengue on Tahiti associated with haemorrhagic manifestations. Am J Trop Med Hyg 22: 237-241.
6. Chungue E, Laudon F, Glaziou P, 1993. Dengue and dengue haemorrhagic fever in French Polynesia. Current situation. Trop Med (Mars): 35: 209-214.
7. Deparis X, Murgue B, Roche C, Cassar O, Chungue E, 1998. Changing clinical and biological manifestations of dengue during the dengue-2 epidemic in French Polynesia in 1996/97-description and analysis in a prospective study. Trop Med Int Health 3: 859-865.
8. Farfan JA, Olson KE, Black IV, Gubler DJ, Beaty BJ, 1997. Rapid characterization of genetic diversity among twelve dengue-2 virus isolates by single-strand conformation polymorphism analysis. Am J Trop Med Hyg 57: 416-422.
9. Diaz FJ, Farfan-Ale JA, Olson KE, Loroño-Pino MA, Gubler DJ, Blair CD, Black WC IV, Beaty BJ, 2002. Genetic variation within the premembrane coding region of dengue viruses from the Yucatan peninsula of Mexico. Am J Trop Med Hyg 67: 93-101.
10. Rico-Hesse R, 1990. Molecular evolution and distribution of dengue viruses type 1 and 2 in nature. Virology 174: 337-343.
11. Chungue E, Cassar O, Drouet MT, Guzman MG, Laille M, Rosen L, Deubel V, 1995. Molecular epidemiology of dengue-1 and dengue-4 viruses. J Gen Virol 76: 1877-1884.
12. Goncalvez AP, Escalante AA, Pujol FH, Ludert JE, Tovar D, Salas RA, Liprandi F, 2002. Diversity and evolution of the envelope gene of dengue virus type 1. Virology 303: 110-119.
13. Anderson R, King AD, Innis BL, 1992. Correlation of the E protein binding with cell susceptibility to dengue 4 virus infection. J Gen Virol 73: 2155-2159.
14. Chen Y, Maguire T, Marks RM, 1996. Demonstration of binding of dengue virus envelope protein to target cells. J Virol 70: 8765-8772.
15. Chungue E, Burucoa C, Boutin JP, Philippon G, Laudon F, Plichart R, Barbazan P, Cardines R, Roux J, 1992. Dengue 1 epidemic in French Polynesia. 1988-1989: surveillance and clinical, epidemiological, virological and serological findings in 1752 documented clinical cases. Trans R Soc Trop Med Hyg 86: 193-197.
16. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG, 1994. The Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrice choice. Nucleic Acids Res 22: 4673-4680.
17. Saitou N, Nei M, 1987. The neighbor joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
18. Kumar S, Tamura K, Jakobsen IB, Nei M, 2001. MEGA2: Molecular Evolutionary Genetics Analysis software. Bioinformatics 17: 1244-1245.
19. Ishak H, Takegami T, Kamimura K, Funada H, 2001. Comparative sequences of two type 1 dengue virus strains possessing different growth characteristics in vitro. Microbiol Immunol 45: 327-331.
20. Heinz FX, Roehrig JT, 1990. Flaviviruses. Regenmortel MHV, Neurath AR, eds. Immunochemistry of Viruses. Volume 11. The Basis for Serodiagnosis and Vaccines. Amsterdam: Elsevier Science Publishers BV (Biomedical Division), 289-305.
21. Lewis JA, Chang GJ, Lanciotti RS, Kinney RM, Mayer LW, Trent DW, 1993. Phylogenetic relationships of dengue-2 viruses. Virology 197: 216-224.
22. Hillis DM, Bull JJ, 1993. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst Biol 42: 182-192.
23. Fujita N, Hotta S, Konishi E, Esaki H, Sumarmo, Sujudi, 1997. Dengue hemorrhagic fever in Jakarta, Indonesia in 1988: isolation of dengue virus from patient whole blood using cell cultures. Am J Trop Med Hyg 56: 318-321.
24. Tolou HJG, Durand JP, Mercier V, de Pina JJ, de Mico P, Billoir F, Charrel RN, de Lamballerie X, 2001. Evidence for recombination in natural populations of dengue virus type-1 based on the analysis of complete genome sequences. J Gen Virol 82: 1283-1290.
25. Rico-Hesse R, Harrison LM, Salas R, Tovar D, Nisalak A, Ramons C, Boshell JR, de Mesa MT, Nogueira RMR, Travassos da Rosa A, 1997. Origins of dengue type 2 viruses associated with increased pathogenicity in the Americas. Virology 230: 244-251.
26. Watts DM, Porter KR, Putvatana P, Vasquez B, Calampa C, Hayes CG, Halstead SB, 1999. Failure of secondary infection with American genotype dengue 2 to cause dengue haemorrhagic fever. Lancet 354: 1431-1434.
27. Sasaki M, Tammy T, 2002. Dengue Fever Update. Communicable Disease Report. Honolulu, HI: Department of Health. Communicable Disease Division.
28. Leitmeyer KC, Vaughn DW, Watts DM, Salas R, Chacon IV, Ramos C, Rico-Hesse R, 1999. Dengue virus structural differences that correlate with pathogenesis. J Virol 73: 4738-4747.
29. Pandey BD, Igarashi A, 2000. Severity-related molecular differences among nineteen strains of dengue type 2 viruses. Microbiol Immunol 44: 179-188.
30. Aviles G, Rowe J, Meissner J, Manzur Caffarena JC, Enria D, St Jeor S, 2002. Phylogenetic relationships of dengue-1 viruses from Argentina and Paraguay. Arch Virol 147: 2075-2087.
31. Duarte dos Santos CN, Rocha CFS, Cordeiro M, Fragoso SP, Rey F, Deubel V, Desprès P, 2002. Genome analysis of dengue type -1 virus isolated between 1990 and 2001 in Brazil reveals a remarkable conservation of the structural proteins but amino acid differences in the non-structural proteins. Virus Res 90: 197-205.
32. Puri B, Nelson W, Porter KR, Henchal EA, Hayes CG, 1998. Complete nucleotide sequence analysis of a Western Pacific dengue type-1 virus strain. Virus Genes 17: 85-88.
33. Chu MC, O'Rourke EJ, Trent DW, 1989. Genetic relatedness among structural protein genes of dengue 1 virus strains. J Gen Virol 70: 1701-1712.
34. Fu J, Tan BH, Yap EH, Chan YC, Tan YH, 1992. Full-length cDNA sequence of dengue type 1 virus (Singapore strain S275/90). Virology 188: 953-958.
35. Shiu SY, Jiang WR, Porterfield JS, Gould EA, 1992. Envelope protein sequences of dengue virus isolates TH-36 and TH-Sman, and identification of a type specific genetic marker for dengue and tick-borne flaviviruses. J Gen Virol 73: 207-212.