-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215: 403-410
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
55949093712
-
Metal ions in biological catalysis: From enzyme databases to general principles
-
Andreini C, Bertini I, Cavallaro G, Holliday GL, Thornton JM (2008) Metal ions in biological catalysis: from enzyme databases to general principles. J Biol Inorg Chem 13: 1205-1218
-
(2008)
J Biol Inorg Chem
, vol.13
, pp. 1205-1218
-
-
Andreini, C.1
Bertini, I.2
Cavallaro, G.3
Holliday, G.L.4
Thornton, J.M.5
-
3
-
-
68549113108
-
Metal-MACiE: A database of metals involved in biological catalysis
-
Andreini C, Bertini I, Cavallaro G, Holliday GM, Thornton JM (2009a) Metal-MACiE: a database of metals involved in biological catalysis. Bioinformatics 25: 2088-2089
-
(2009)
Bioinformatics
, vol.25
, pp. 2088-2089
-
-
Andreini, C.1
Bertini, I.2
Cavallaro, G.3
Holliday, G.M.4
Thornton, J.M.5
-
4
-
-
64449083858
-
Structural analysis of metal sites in proteins: Non-heme iron sites as a case study
-
Andreini C, Bertini I, Cavallaro G, Najmanovich RJ, Thornton JM (2009b) Structural analysis of metal sites in proteins: non-heme iron sites as a case study. J Mol Biol 388: 356-380
-
(2009)
J Mol Biol
, vol.388
, pp. 356-380
-
-
Andreini, C.1
Bertini, I.2
Cavallaro, G.3
Najmanovich, R.J.4
Thornton, J.M.5
-
5
-
-
37349120036
-
Prediction of transition metal-binding sites from apo protein structures
-
Babor M, Gerzon S, Raveh B, Sobolev V, Edelman M (2008) Prediction of transition metal-binding sites from apo protein structures. Proteins 370: 208-217
-
(2008)
Proteins
, vol.370
, pp. 208-217
-
-
Babor, M.1
Gerzon, S.2
Raveh, B.3
Sobolev, V.4
Edelman, M.5
-
6
-
-
0036084699
-
MDB: The Metalloprotein Database and Browser at the Scripps Research Institute
-
Castagnetto JM, Hennessy SW, Roberts VA, Getzoff ED, Tainer JA, Pique ME (2002) MDB: the Metalloprotein Database and Browser at the Scripps Research Institute. Nucl Acids Res 30: 379-382
-
(2002)
Nucl Acids Res
, vol.30
, pp. 379-382
-
-
Castagnetto, J.M.1
Hennessy, S.W.2
Roberts, V.A.3
Getzoff, E.D.4
Tainer, J.A.5
Pique, M.E.6
-
7
-
-
0026409452
-
Structural biology of zinc
-
Christianson DW (1991) Structural biology of zinc. Adv Protein Chem 42: 281-355
-
(1991)
Adv Protein Chem
, vol.42
, pp. 281-355
-
-
Christianson, D.W.1
-
8
-
-
0036635468
-
A long way ahead: Understanding and engineering plant metal accumulation
-
Clemens S, Palmgren MG, Kramer U (2002) A long way ahead: understanding and engineering plant metal accumulation. Trends Plant Sci 7: 309-315
-
(2002)
Trends Plant Sci
, vol.7
, pp. 309-315
-
-
Clemens, S.1
Palmgren, M.G.2
Kramer, U.3
-
11
-
-
0043122944
-
ExPASy: The proteomics server for in-depth protein knowledge and analysis
-
Gasteiger E, Gattiker A, Hoogland C, Ivanyi I, Appel RD, Bairoch A (2003) ExPASy: the proteomics server for in-depth protein knowledge and analysis. Nucl Acids Res 31: 3784-3788
-
(2003)
Nucl Acids Res
, vol.31
, pp. 3784-3788
-
-
Gasteiger, E.1
Gattiker, A.2
Hoogland, C.3
Ivanyi, I.4
Appel, R.D.5
Bairoch, A.6
-
12
-
-
39749099893
-
Exploiting 3D structural templates for detection of metal-binding sites in protein structures
-
Goyal K, Mande SC (2008) Exploiting 3D structural templates for detection of metal-binding sites in protein structures. Proteins 70: 1206-1218
-
(2008)
Proteins
, vol.70
, pp. 1206-1218
-
-
Goyal, K.1
Mande, S.C.2
-
13
-
-
33746124556
-
Biomolecules in the computer. Jmol to the rescue
-
Herraez A (2006) Biomolecules in the computer. Jmol to the rescue. Biochem Mol Biol Educ 34: 255-261
-
(2006)
Biochem Mol Biol Educ
, vol.34
, pp. 255-261
-
-
Herraez, A.1
-
14
-
-
38549107891
-
The 20 years of PROSITE
-
Hulo N, Bairoch A, Bulliard V, Cerutti L, Cunche B, De Castro E, Lachaize C, Langendijk-Genevaux PS, Sigrist CJA (2007) The 20 years of PROSITE. Nucl Acids Res 36: D245-D249
-
(2007)
Nucl Acids Res
, vol.36
-
-
Hulo, N.1
Bairoch, A.2
Bulliard, V.3
Cerutti, L.4
Cunche, B.5
de Castro, E.6
Lachaize, C.7
Langendijk-Genevaux, P.S.8
Sigrist, C.J.A.9
-
15
-
-
0028330140
-
Characterization of interactions and metal-binding sites in proteins
-
Jernigan R, Raghunathan G, Bahor I (1994) Characterization of interactions and metal-binding sites in proteins. Curr Opin Struct Biol 4: 256-263
-
(1994)
Curr Opin Struct Biol
, vol.4
, pp. 256-263
-
-
Jernigan, R.1
Raghunathan, G.2
Bahor, I.3
-
16
-
-
51749116964
-
MetalDetector: A web server for predicting metal-binding sites and disulfide bridges in proteins from sequence
-
Lippi M, Passerini A, Punta M, Rost B, Frasconi P (2008) MetalDetector: a web server for predicting metal-binding sites and disulfide bridges in proteins from sequence. Bioinformatics 24: 2094-2095
-
(2008)
Bioinformatics
, vol.24
, pp. 2094-2095
-
-
Lippi, M.1
Passerini, A.2
Punta, M.3
Rost, B.4
Frasconi, P.5
-
18
-
-
33748540615
-
-
John Wiley and Sons Ltd, West Sussex
-
Messerschmidt A, Huber R, Poulos T, Wieghard K (2001) Handbook of Metalloproteins Vol 1 and 2, John Wiley and Sons Ltd, West Sussex
-
(2001)
Handbook of Metalloproteins Vol 1 and 2
-
-
Messerschmidt, A.1
Huber, R.2
Poulos, T.3
Wieghard, K.4
-
20
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
Murzin AG, Brenner SE, Hubbard T, Chothia C (1995) SCOP: a structural classification of proteins database for the investigation of sequences and structures. J Mol Biol 247: 536-540
-
(1995)
J Mol Biol
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
21
-
-
24744433115
-
Function and molecular evolution of multicopper blue proteins
-
Nakamura K, Go N (2005) Function and molecular evolution of multicopper blue proteins. Cell Mol Life Sci 62: 2050-2066
-
(2005)
Cell Mol Life Sci
, vol.62
, pp. 2050-2066
-
-
Nakamura, K.1
Go, N.2
-
22
-
-
0027183546
-
Transition metals in control of gene expression
-
O'Halloran TV (1993) Transition metals in control of gene expression. Science 261: 715-725
-
(1993)
Science
, vol.261
, pp. 715-725
-
-
O'Halloran, T.V.1
-
23
-
-
0027312612
-
Roles of urease in plant cells
-
In: Jeon KW, Jarvik J (eds), Academic Press, San Diego
-
Polacco JC, Holland MA (1993) Roles of urease in plant cells. In: Jeon KW, Jarvik J (eds) International Review of Cytology. Vol 145, Academic Press, San Diego, pp 65-102
-
(1993)
International Review of Cytology
, vol.145
, pp. 65-102
-
-
Polacco, J.C.1
Holland, M.A.2
-
24
-
-
55449125498
-
The rough guide to in silico functional prediction, or how to use sequence and structure information to predict protein funciton
-
doi: 10.1371/journal.pcbi.1000160
-
Punta M, Ofran Y (2008) The rough guide to in silico functional prediction, or how to use sequence and structure information to predict protein funciton. PLoS Comput Biol 4(10): e1000160. doi: 10.1371/journal.pcbi.1000160
-
(2008)
Plos Comput Biol
, vol.4
, Issue.10
-
-
Punta, M.1
Ofran, Y.2
-
25
-
-
0033617578
-
Undetectable intraellular free copper: The requirement of a copper chaperone for superoxide dismutase
-
Rae TD, Schmidt PJ, Pufahl RA, Culotta VC, O'Halloran TV (1999) Undetectable intraellular free copper: the requirement of a copper chaperone for superoxide dismutase. Science 284: 805-808
-
(1999)
Science
, vol.284
, pp. 805-808
-
-
Rae, T.D.1
Schmidt, P.J.2
Pufahl, R.A.3
Culotta, V.C.4
O'Halloran, T.V.5
-
26
-
-
0032548142
-
Three-dimensional structure of the plant photosystem II reaction center at 8Å resolution
-
Rhee K-H, Morris EP, Barber J, Kuhlbrandt W (1998) Three-dimensional structure of the plant photosystem II reaction center at 8Å resolution. Nature 396: 283-286
-
(1998)
Nature
, vol.396
, pp. 283-286
-
-
Rhee, K.-H.1
Morris, E.P.2
Barber, J.3
Kuhlbrandt, W.4
-
27
-
-
0029007917
-
Phytoremediation: A novel strategy for the removal of toxic metals from the environment using plants
-
Salt DE, Blaylock M, Kumar NPBA, Dushenkov V, Ensley BD, Chet I, Raskin I (1995) Phytoremediation: a novel strategy for the removal of toxic metals from the environment using plants. Nat Biotechnol 13: 468-272
-
(1995)
Nat Biotechnol
, vol.13
, pp. 468-272
-
-
Salt, D.E.1
Blaylock, M.2
Kumar, N.P.B.A.3
Dushenkov, V.4
Ensley, B.D.5
Chet, I.6
Raskin, I.7
-
28
-
-
22544450150
-
Prediction of water and metal binding sites and their affinities by using the Fold-X force field
-
Schymkowitz JWH, Rousseau F, Martins IC, Ferkinghoff-Borg J, Stricher F, Serrano L (2005) Prediction of water and metal binding sites and their affinities by using the Fold-X force field. Proc Natl Acad Sci USA 102: 10147-10152
-
(2005)
Proc Natl Acad Sci Usa
, vol.102
, pp. 10147-10152
-
-
Schymkowitz, J.W.H.1
Rousseau, F.2
Martins, I.C.3
Ferkinghoff-Borg, J.4
Stricher, F.5
Serrano, L.6
-
29
-
-
4143055915
-
Predicting metal-binding site residues in low-resolution structural models
-
Sodhi JS, Bryson K, McGuffin LJ, Ward JJ, Wernisch L, Jones DT (2004) Predicting metal-binding site residues in low-resolution structural models. J Mol Biol 342: 307-320
-
(2004)
J Mol Biol
, vol.342
, pp. 307-320
-
-
Sodhi, J.S.1
Bryson, K.2
McGuffin, L.J.3
Ward, J.J.4
Wernisch, L.5
Jones, D.T.6
-
30
-
-
33748650790
-
Biochemical characterization of MmoS, a sensor protein involved in copper-dependent regulation of soluble methane monooxygenase
-
Ukaegbu UE, Henery S, Rosenzweig AC (2006) Biochemical characterization of MmoS, a sensor protein involved in copper-dependent regulation of soluble methane monooxygenase. Biochem 45: 10191-10198
-
(2006)
Biochem
, vol.45
, pp. 10191-10198
-
-
Ukaegbu, U.E.1
Henery, S.2
Rosenzweig, A.C.3
-
31
-
-
0034951646
-
Chemical selection of elements by cells
-
Williams RJP (2001) Chemical selection of elements by cells. Coord Chem Rev 216-217: 583-595
-
(2001)
Coord Chem Rev
, vol.216-217
, pp. 583-595
-
-
Williams, R.J.P.1
-
32
-
-
44949145113
-
Progress and challenges in protein structure prediction
-
Zhang Y (2008) Progress and challenges in protein structure prediction. Curr Opin Struct Biol 18: 342-348
-
(2008)
Curr Opin Struct Biol
, vol.18
, pp. 342-348
-
-
Zhang, Y.1
|