Automatic beam path analysis of laser wakefield particle acceleration data

Computational Science and Discovery

Volumn 2, Issue 1, 2009, Pages

  Rübel, Oliver ^a,b,c   Geddes, Cameron G R ^a   Cormier Michel, Estelle ^a   Wu, Kesheng ^a   Prabhat, ^a   Weber, Gunther H ^a   Ushizima, Daniela M ^a   Messmer, Peter ^d   Hagen, Hans ^b   Hamann, Bernd ^a,b,c   Bethel, Wes ^a,c  

^a LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^b Rheinland Pfälzische Technische Universität Kaiserslautern Landau   (Germany)

^c University of California   (United States)

^d TECH X CORPORATION   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 76249122619     PISSN: 17494680     EISSN: 17494699     Source Type: Journal    
DOI: 10.1088/1749-4699/2/1/015005     Document Type: Article

References (56)

1. Tajima T and Dawson J M 1979 Laser electron accelerator Phys. Rev. Lett. 43 267-70
2. LOASIS, http://loasis.lbl.gov/
3. Geddes C, Toth C, van Tilborg J, Esarey E, Schroeder C, Bruhwiler D, Nieter C, Cary J and Leemans W 2004 High-quality electron beams from a laser wakefield accelerator using plasma-channel guiding Nature 438 538-41 LBNL-55732
4. Leemans W P, Nagler B, Gonsalves A J, Toth C, Nakamura K, Geddes C G R, Esarey E, Schroeder C B and Hooker S M 2006 GeV electron beams from a centimetre-scale accelerator Nat. Phys. 2 696-9
5. Geddes C G R 2005 Plasma channel guided laser wakefield accelerator PhD Dissertation University of California, Berkeley
6. Tsung F S, Narang R, Mori W B, Joshi C, Fonseca R A and Silva L O 2004 Near-GeV-energy laser-wakefield acceleration of self-injected electrons in a centimeter-scale plasma channel Phys. Rev. Lett. 93 185002
7. Rübel O et al 2008 High performance multivariate visual data exploration for extemely large data SuperComputing 2008 (SC08) (Austin, TX, November 2008) LBNL-716E
8. Ushizima D et al 2008 Automated analysis for detecting beams in laser wakefield simulations Proc. 7th Int. Conf. on Machine Learning and Applications 2008 (ICMLA 08) (Los Alamitos, CA: IEEE Computer Society Press) p382387 LBNL-960E
9. FastBit is available from http://codeforge.lbl.gov/projects/fastbit/
10. VisIt is available from http://wci.llnl.gov/codes/visit/
11. Root is available from http://root.cern.ch/drupal/
12. AIDA is available from http://aida.freehep.org/
13. R is available from http://www.r-project.org/
14. IDL is available from http://www.ittvis.com/ProductServices/IDL.aspx
15. OpenDX is available from http://www.opendx.org/
16. VorpalView is availble from http://www.txcorp.com/products/VORPAL/ vorpalview.php
17. ParaView is available from http://www.paraview.org/
18. Fonseca R A, Martins S F, Silva L O, Tonge J W, Tsung F S and Mori W B 2008 One-to-one direct modeling of experiments and astrophysical scenarios: pushing the envelope on kinetic plasma simulations Plasma Phys. Control. Fusion 50 124034
19. Fonseca R A et al 2002 OSIRIS: a three-dimensional, fully relativistic particle in cell code for modeling plasma based accelerators Lecture Notes in Computer Science, Computational Science ICCS 2002 vol 2331/2002 pp342-51
20. Martins S F, Fonseca R A, Silva L O and Mori W B 2009 On dynamics and acceleration in relativistic shocks Astrophys. J. Lett. 695 L189-93
21. Bagherjeiran A and Kamath C 2006 Graph-based methods for orbit classification SDM
22. Love N S and Kamath C 2007 Image analysis for the identification of coherent structures in plasma Applications of Digital Image Processing (Proc. SPIE) vol 6696 ed A G Tescher (Bellingham, WA: SPIE)
23. Hlína J, Nwnicka V and Sonsky J 2004 Identification of dynamic patterns and their velocities in thermal plasma jets Czech. J. Phys. 54 199-210
24. Gonzalez R C and Woods R E 2007 Digital Image Processing vol 3 (Englewood, Cliffs, NJ: Prentice-Hall)
25. Zucker S W 1976 Region growing: childhood and adolescence Comput. Graph. Image Process. 5 382-99
26. Strehl A and Ghosh J 2002 Cluster ensembles-a knowledge reuse framework for combining multiple partitions J.Mach. Learn. Res. 3 583-617
27. Kittler J, Hatef M, Duin R P and Matas J 1998 On combining classifiers IEEE Trans. Pattern Anal. Mach. Intell. 20 226-39
28. Fred A and Jain A 2005 Combining multiple clustering using evidence accumulation IEEE Trans. Pattern Anal. Mach. Intell. 27 835-50
29. Dietterich T G 2000 Ensemble methods in machine learning Lecture Notes in Computer Science vol 1857/2000 (Berlin: Springer) pp 1-15
30. Comer D 1979 The ubiquitous B-Tree Comput. Surveys 11 121-37
31. Chaudhuri S and Dayal U 1997 An overview of data warehousing and OLAP technology ACM SIGMOD Rec. 26 65-74 (Pubitemid 127458202)
32. O'Neil P 1987 Model 204 Architecture and performance Proc. 2nd Int. Workshop in High Performance Transaction Systems (Asilomar, CA) (Lecture Notes in Computer Science) vol 359 (Berlin: Springer) pp 40-59
33. Stockinger K, Wu K and Shoshani A 2002 Strategies for processing ad hoc queries on large data warehouses DOLAP'02 (McLean, VI) pp 72-9
34. Wu K, Stockinger K and Shosani A 2008 Breaking the curse of cardinality on Bitmap Indexes Proc. SSDBM, 2008 pp 348-65
35. Chan C-Y and Ioannidis Y E 1998 Bitmap Index design and evaluation SIGMOD, 1998 pp 355-66
36. Wu K, Otoo E and Shoshani A 2004 On the performance of bitmap indices for high cardinality attributes VLDB pp24-35
37. Wu K, Otoo E and Shoshani A 2002 Compressing Bitmap Indexes for faster search operations SSDBM'02 (Edinburgh, Scotland, 2002) pp 99-108
38. Wu K, Otoo E and Shoshani A 2006 Optimizing Bitmap Indices with efficient compression ACM Trans. Database Syst. 31 1-38
39. Bethel E W, Campbell S, Dart E, Stockinger K and Wu K 2006 Accelerating network traffic analysis using query-driven visualization Proc. 2006 IEEE Symp. on Visual Analytics Science and Technology (October 2006) (Los Alamitos, CA: IEEE Computer Society Press) pp 115-22
40. Wu K, Koegler W, Chen J and Shoshani A 2003 Using bitmap index for interactive exploration of large datasets Proc. SSDBM'2003 (Washington, DC: IEEE Computer Society) pp 65-74
41. Stockinger K, Bethel E W, Campbell S, Dart E and Wu K 2006 Detecting distributed scans using high-performance query-driven visualization SC '06: Proc. 2006 ACM/IEEE Conf. on High Performance Computing, Networking, Storage and Analysis (Oct. 2006) (New York: IEEE Computer Society Press) LBNL-60053
42. Childs H, Brugger E S, Bonnell K S, Meredith J S, Miller M, Whitlock B J and Max N 2005 A contract-based system for large data visualization Proc. IEEE Visualization 2005 (October 2005) pp 190-8
43. EnSight Gold is available from http://www.ensight.com/ensight-gold.html
44. Stockinger K, Shalf J, Wu K and Bethel E W 2005 Query-driven visualization of large data sets Proc. IEEE Visualization 2005 (Oct. 2005) (Los Alamitos, CA: IEEE Computer Society Press) pp 167-74 LBNL-57511
45. Hansen C D and Johnson C R 2005 The Visualization Handbook (Amsterdam: Elsevier)
46. Birdsall C K and Langdon A 2004 Plasma Physics via Computer Simulation Series in Plasma Physics (October 2004) 1st edn (London: Taylor and Francis)
47. Geddes C G R et al 2008 Computational studies and optimization of wakefield accelerators J. Phys. Conf. Ser. 125 012002 LBNL-2245E
48. Michel E, Shadwick B A, Schroeder C B, Geddes C G R, Esarey E, Leemans W P, Ruhl H and Cowan T 2006 Accurate modeling of laser-plasma accelerators with particle-in-cell codes Proc. Advanced Accelerator Concepts: 12th Advanced Accelerator Concepts Workshop (American Institute of Physics Conference Series) vol 877 ed M Conde and C Eyberger (New York: AIP) pp 213-9
49. Nieter C and Cary J R 2004 VORPAL: a versatile plasma simulation code J. Comput. Phys. 196 448-73
50. Wang J, Liewer P and Decyk V 1995 3D electromagnetic plasma particle simulations on a MIMD parallel computer Comput. Phys. Commun. 87 35-53
51. Vizschema is available from http://ice.txcorp.com/trac/vizschema
52. Gosink L, Shalf J, Stockinger K, Wu K and Bethel E W 2006 HDF5-FastQuery: accelerating complex queries on HDF datasets using fast Bitmap Indices Proc. 18th Int. Conf. on Scientific and Statistical Database Management (Los Alamitos, CA: IEEE Computer Society Press)
53. HDF5 is available from http://www.hdfgroup.org/HDF5/index.html
54. Adelmann A, Ryne R, Shalf J and Siegerist C 2005 H5Part: a portable high performance parallel data interface for particle simulations Proc. Particle Accelerator Conf. (PAC05) (16-20 May 2005)
55. Adelmann A, Gsell A, Oswald B, Schietinger T, Bethel E W, Shalf J, Siegerist C and Stockinger K 2007 Progress on H5Part: a portable high performance parallel data interface for electromagnetic simulations Particle Accelerator Conf. PAC07 (June 2007)
56. VTK User's Guide. Kitware, Inc. 5th ed, September 2006