Genes and functions controlled by floral organ identity genes

Seminars in Cell and Developmental Biology

Volumn 21, Issue 1, 2010, Pages 94-99

  Sablowski, Robert ^a  

^a NORWICH RESEARCH PARK   (United Kingdom)

Author keywords

Floral homeotic genes; Flower development; Target genes

Indexed keywords

HORMONE; MADS DOMAIN PROTEIN; PHYTOHORMONE; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR SEP 3; UNCLASSIFIED DRUG;

ANTIBODY SPECIFICITY; ARABIDOPSIS; DNA RECOMBINATION; FLOWER; GENE; GENE EXPRESSION; GENE FUNCTION; GENE IDENTIFICATION; GENE REPRESSION; GENE SEQUENCE; GENE TARGETING; GENETIC SCREENING; NONHUMAN; ORGANOGENESIS; PLANT DEVELOPMENT; PLANT LEAF; PROTEIN LOCALIZATION; PROTEIN MODIFICATION; REPRODUCTION; REVIEW; SPECIES DIFFERENTIATION; TRANSCRIPTION REGULATION;

ANIMALIA;

EID: 75849116362     PISSN: 10849521     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.semcdb.2009.08.008     Document Type: Review

References (49)

1. Krizek B.A., and Fletcher J.C. Molecular mechanisms of flower development: an armchair guide. Nat Rev Genet 6 (2005) 688-698
2. Smyth D.R. Morphogenesis of flowers-our evolving view. Plant Cell 17 (2005) 330-341
3. Honma T., and Goto K. Complexes of MADS-box proteins are sufficient to convert leaves into floral organs. Nature 409 (2001) 525-529
4. Pelaz S., Tapia-Lopez R., Alvarez-Buylla E.R., and Yanofsky M.F. Conversion of leaves into petals in Arabidopsis. Curr Biol 11 (2001) 182-184
5. Bowman J.L., Smyth D.R., and Meyerowitz E.M. Genetic interactions among floral homeotic genes of Arabidopsis. Development 112 (1991) 1-20
6. Ditta G., Pinyopich A., Robles P., Pelaz S., and Yanofsky M.F. The SEP4 gene of Arabidopsis thaliana functions in floral organ and meristem identity. Curr Biol 14 (2004) 1935-1940
7. Hombria J.C.G., and Lovegrove B. Beyond homeosis-HOX function in morphogenesis and organogenesis. Differentiation 71 (2003) 461-476
8. Hueber S.D., and Lohmann I. Shaping segments: Hox gene function in the genomic age. Bioessays 30 (2008) 965-979
9. Bowman J.L., Smyth D.R., and Meyerowitz E.M. Genes directing flower development in Arabidopsis. Plant Cell 1 (1989) 37-52
10. Carpenter R., and Coen E.S. Floral homeotic mutations produced by transposon-mutagenesis in Antirrhinum majus. Genes Dev 4 (1990) 1483-1493
11. Meyerowitz E.M. Plants compared to animals: the broadest comparative study of development. Science 295 (2002) 1482-1485
12. Egea-Cortines M., Saedler H., and Sommer H. Ternary complex formation between the MADS-box proteins SQUAMOSA DEFICIENS and GLOBOSA is involved in the control of floral architecture in Antirrhinum majus. EMBO J 18 (1999) 5370-5379
13. Theissen G. Development of floral organ identity: stories from the MADS house. Curr Opin Plant Biol 4 (2001) 75
14. Savidge B., Rounsley S.D., and Yanofsky M.F. Temporal relationship between the transcription of two Arabidopsis MADS box genes and the floral organ identity genes. Plant Cell 7 (1995) 721-733
15. Sablowski R.W., Meyerowitz E.M., and Yanofsky M.F. A homolog of NO APICAL ERISTEM is an immediate target of the floral homeotic genes APETALA3/PISTILLATA [published erratum appears in Cell 1998;Feb 20;92(4):following 585]. Cell 92 (1998) 93-103
16. Zik M., and Irish V.F. Global identification of target genes regulated by APETALA3 and PISTILLATA floral homeotic gene action. Plant Cell 15 (2003) 207-222
17. Wellmer F., Riechmann J.L., Alves-Ferreira M., and Meyerowitz E.M. Genome-wide analysis of spatial gene expression in Arabidopsis flowers. Plant Cell 16 (2004) 1314-1326
18. Alves-Ferreira M., Wellmer F., Banhara A., Kumar V., Riechmann J.L., and Meyerowitz E.M. Global expression profiling applied to the analysis of Arabidopsis stamen development. Plant Physiol 145 (2007) 747-762
19. Peiffer J.A., Kaushik S., Sakai H., Arteaga-Vazquez M., Sanchez-Leon N., Ghazal H., et al. A spatial dissection of the Arabidopsis floral transcriptome by MPSS. BMC Plant Biol (2008) 8
20. Bey M., Stuber K., Fellenberg K., Schwarz-Sommera Z., Sommer H., Saedler H., et al. Characterization of Antirrhinum petal development and identification of target genes of the class B MADS box gene DEFICIENS. Plant Cell 16 (2004) 3197-3215
21. Gomez-Mena C., de Folter S., Costa M.M.R., Angenent G.C., and Sablowski R. Transcriptional program controlled by the floral homeotic gene AGAMOUS during early organogenesis. Development 132 (2005) 429-438
22. Zhang X., Feng B., Zhang Q., Zhang D., Altman N., and Ma H. Genome-wide expression profiling and identification of gene activities during early flower development in Arabidopsis. Plant Mol Biol 58 (2005) 401
23. Wellmer F., Alves-Ferreira M., Dubois A., Riechmann J.L., and Meyerowitz E.M. Genome-wide analysis of gene expression during early Arabidopsis flower development. PLoS Genet 2 (2006) 1012-1024
24. Furutani I., Sukegawa S., and Kyozuka J. Genome-wide analysis of spatial and temporal gene expression in rice panicle development. Plant J 46 (2006) 503-511
25. Kaufmann K., Mui J.M., o R., Jauregui C.A., Airoldi C., Smaczniak P., et al. Target genes of the MADS transcription factor SEPALLATA3: integration of developmental and hormonal pathways in the Arabidopsis flower. PLoS Biol 7 (2009) e90
26. Liljegren S.J., Ditta G.S., Eshed H.Y., Savidge B., Bowman J.L., and Yanofsky M.F. SHATTERPROOF MADS-box genes control seed dispersal in Arabidopsis. Nature 404 (2000) 766-770
27. Yang W.C., Ye D., Xu J., and Sundaresan V. The SPOROCYTELESS gene of Arabidopsis is required for initiation of sporogenesis and encodes a novel nuclear protein. Genes Dev 13 (1999) 2108-2117
28. Ito T., Wellmer F., Yu H., Das P., Ito N., Alves-Ferreira M., et al. The homeotic protein AGAMOUS controls microsporogenesis by regulation of SPOROCYTELESS. Nature 430 (2004) 356-360
29. Kuusk S., Sohlberg J.J., Long J.A., Fridborg I., Sundberg E., and STY1. STY2 promote the formation of apical tissues during Arabidopsis gynoecium development. Development 129 (2002) 4707-4717
30. Dinneny J.R., Yadegari R., Fischer R.L., Yanofsky M.F., and Weigel D. The role of JAGGED in shaping lateral organs. Development 131 (2004) 1101-1110
31. Dinneny J.R., Weigel D., Yanofsky M.F., and NUBBIN. JAGGED define stamen and carpel shape in Arabidopsis. Development 133 (2006) 1645-1655
32. Ohno C.K., Reddy G.V., Heisler M.G.B., and Meyerowitz E.M. The Arabidopsis JAGGED gene encodes a zinc finger protein that promotes leaf tissue development. Development 131 (2004) 1111-1122
33. Gomez-Mena C., and Sablowski R. ARABIDOPSIS THALIANA HOMEOBOX GENE1 establishes the basal boundaries of shoot organs and controls stem growth. Plant Cell 20 (2008) 2059-2072
34. Bi Y.-M., Zhang Y., Signorelli T., Zhao R., Zhu T., and Rothstein S. Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. Plant J 44 (2005) 680-692
35. Mara C.D., and Irish V.F. Two GATA transcription factors are downstream effectors of floral homeotic gene action in Arabidopsis. Plant Physiol 147 (2008) 707-718
36. Mandaokar A., Thines B., Shin B., Lange B.M., Choi G., Koo Y.J., et al. Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. Plant J 46 (2006) 984-1008
37. Ito T., Ng K.H., Lim T.S., Yu H., and Meyerowitz E.M. The homeotic protein AGAMOUS controls late stamen development by regulating a jasmonate biosynthetic gene in Arabidopsis. Plant Cell 19 (2007) 3516-3529
38. Yu H., Ito T., Zhao Y.X., Peng J.R., Kumar P., and Meyerowitz E.M. Floral homeotic genes are targets of gibberellin signaling in flower development. Proc Natl Acad Sci USA 101 (2004) 7827-7832
39. de Folter S., and Angenent G.C. trans meets cis in MADS science. Trends Plant Sci 11 (2006) 224-231
40. Akam M. Hox genes: from master genes to micromanagers. Curr Biol 8 (1998) R676
41. Davidson E.H., and Levine M.S. Properties of developmental gene regulatory networks. Proc Natl Acad Sci USA 105 (2008) 20063-20066
42. Birnbaum K., Shasha D.E., Wang J.Y., Jung J.W., Lambert G.M., Galbraith D.W., et al. A gene expression map of the Arabidopsis root. Science 302 (2003) 1956-1960
43. Yadav R.K., Girke T., Pasala S., Xie M., and Reddy G.V. Gene expression map of the Arabidopsis shoot apical meristem stem cell niche. Proc Natl Acad Sci 106 (2009) 4941
44. Gaudet J., and Mango S.E. Regulation of organogenesis by the Caenorhabditis elegans, FoxA protein PHA-41. Science 295 (2002) 821-825
45. Gaudet J., Muttumu S., Horner M., and Mango S.E. Whole-genome analysis of temporal gene expression during foregut development. PLoS Biol 2 (2004) e352
46. Saleh A., Alvarez-Venegas R., Yilmaz M., Le O., Hou G.C., Sadder M., et al. The highly similar Arabidopsis homologs of trithorax ATX1 and ATX2 encode proteins with divergent biochemical functions. Plant Cell 20 (2008) 568-579
47. Jiao Y.L., Riechmann J.L., and Meyerowitz E.M. Transcriptome-wide analysis of uncapped mRNAs in Arabidopsis reveals regulation of mRNA degradation. Plant Cell 20 (2008) 2571-2585
48. Espinosa-Soto C., Padilla-Longoria P., and Alvarez-Buylla E.R. A gene regulatory network model for cell-fate determination during Arabidopsis thaliana flower development that is robust and recovers experimental gene expression profiles. Plant Cell 16 (2004) 2923-2939
49. Sun B., Xu Y.F., Ng K.H., and Ito T. A timing mechanism for stem cell maintenance and differentiation in the Arabidopsis floral meristem. Genes Dev 23 (2009) 1791-1804