-
1
-
-
33846102842
-
DOMINO:Adatabase of domain-peptide interactions
-
Ceol, A., Chatr-aryamontri, A., Santonico, E., Sacco, R., Castagnoli, L., and Cesareni, G. (2007)DOMINO:Adatabase of domain-peptide interactions. Nucleic Acids Res. 35, D557-D560.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Ceol, A.1
Chatr-aryamontri, A.2
Santonico, E.3
Sacco, R.4
Castagnoli, L.5
Cesareni, G.6
-
2
-
-
2542463049
-
Selectivity and promiscuity in the interaction network mediated by protein recognition modules
-
Castagnoli, L., Costantini, A., Dall'Armi, C., Gonfloni, S., Montecchi-Palazzi, L., Panni, S., Paoluzi, S., Santonico, E., and Cesareni, G. (2004) Selectivity and promiscuity in the interaction network mediated by protein recognition modules. FEBS Lett. 567, 74-79.
-
(2004)
FEBS Lett
, vol.567
, pp. 74-79
-
-
Castagnoli, L.1
Costantini, A.2
Dall'Armi, C.3
Gonfloni, S.4
Montecchi-Palazzi, L.5
Panni, S.6
Paoluzi, S.7
Santonico, E.8
Cesareni, G.9
-
3
-
-
0029374716
-
Origin of PDZ (DHR, GLGF) domains
-
Kennedy, M. B. (1995) Origin of PDZ (DHR, GLGF) domains. Trends Biochem. Sci. 20, 350.
-
(1995)
Trends Biochem. Sci
, vol.20
, pp. 350
-
-
Kennedy, M.B.1
-
4
-
-
0033617473
-
Unexpectedmodes of PDZ domain scaffolding revealed by structure of nNOS-syntrophin complex
-
Hillier, B. J., Christopherson, K. S., Prehoda, K. E., Bredt, D. S., and Lim,W.A. (1999)Unexpectedmodes of PDZ domain scaffolding revealed by structure of nNOS-syntrophin complex. Science 284, 812-815.
-
(1999)
Science
, vol.284
, pp. 812-815
-
-
Hillier, B.J.1
Christopherson, K.S.2
Prehoda, K.E.3
Bredt, D.S.4
Lim, W.A.5
-
5
-
-
7544232779
-
Internal recognition through PDZ domain plasticity in the Par-6-Pals1 complex
-
Penkert, R. R., DiVittorio, H. M., and Prehoda, K. E. (2004) Internal recognition through PDZ domain plasticity in the Par-6-Pals1 complex. Nat. Struct. Mol. Biol. 11, 1122-1127.
-
(2004)
Nat. Struct. Mol. Biol
, vol.11
, pp. 1122-1127
-
-
Penkert, R.R.1
DiVittorio, H.M.2
Prehoda, K.E.3
-
6
-
-
0036289460
-
PIP(2)-PDZ domain binding controls the association of syntenin with the plasma membrane
-
Zimmermann, P., Meerschaert, K., Reekmans, G., Leenaerts, I., Small, J. V., Vandekerckhove, J., David, G., and Gettemans, J. (2002) PIP(2)-PDZ domain binding controls the association of syntenin with the plasma membrane. Mol. Cell 9, 1215-1225.
-
(2002)
Mol. Cell
, vol.9
, pp. 1215-1225
-
-
Zimmermann, P.1
Meerschaert, K.2
Reekmans, G.3
Leenaerts, I.4
Small, J.V.5
Vandekerckhove, J.6
David, G.7
Gettemans, J.8
-
7
-
-
2342531574
-
PDZ domains: Common players in the cell signaling
-
Jelen, F., Oleksy, A., Smietana, K., and Otlewski, J. (2003) PDZ domains: Common players in the cell signaling. Acta Biochim. Pol. 50, 985-1017.
-
(2003)
Acta Biochim. Pol
, vol.50
, pp. 985-1017
-
-
Jelen, F.1
Oleksy, A.2
Smietana, K.3
Otlewski, J.4
-
8
-
-
0030604722
-
Crystal structures of a complexed and peptide-free membrane protein-binding domain: Molecular basis of peptide recognition by PDZ
-
Doyle, D. A., Lee, A., Lewis, J., Kim, E., Sheng, M., and MacKinnon, R. (1996) Crystal structures of a complexed and peptide-free membrane protein-binding domain: Molecular basis of peptide recognition by PDZ. Cell 85, 1067-1076.
-
(1996)
Cell
, vol.85
, pp. 1067-1076
-
-
Doyle, D.A.1
Lee, A.2
Lewis, J.3
Kim, E.4
Sheng, M.5
MacKinnon, R.6
-
9
-
-
0037070149
-
PDZ domains: Troubles in classification
-
Vaccaro, P., and Dente, L. (2002) PDZ domains: Troubles in classification. FEBS Lett. 512, 345-349.
-
(2002)
FEBS Lett
, vol.512
, pp. 345-349
-
-
Vaccaro, P.1
Dente, L.2
-
10
-
-
0033776145
-
ERBIN: AA basolateral PDZ protein that interacts with the mammalian ERBB2/HER2 receptor
-
Borg, J. P., Marchetto, S., Le Bivic, A., Ollendorff, V., Jaulin-Bastard, F., Saito, H., Fournier, E., Adelaide, J., Margolis, B., and Birnbaum, D. (2000) ERBIN: aA basolateral PDZ protein that interacts with the mammalian ERBB2/HER2 receptor. Nat. Cell Biol. 2, 407-414.
-
(2000)
Nat. Cell Biol
, vol.2
, pp. 407-414
-
-
Borg, J.P.1
Marchetto, S.2
Le Bivic, A.3
Ollendorff, V.4
Jaulin-Bastard, F.5
Saito, H.6
Fournier, E.7
Adelaide, J.8
Margolis, B.9
Birnbaum, D.10
-
11
-
-
0031861717
-
CIPP, a novel multivalent PDZ domain protein, selectively interacts with Kir4.0 family members,NMDAreceptor subunits, neurexins, and neuroligins
-
Kurschner, C., Mermelstein, P. G., Holden, W. T., and Surmeier, D. J. (1998) CIPP, a novel multivalent PDZ domain protein, selectively interacts with Kir4.0 family members,NMDAreceptor subunits, neurexins, and neuroligins. Mol. Cell. Neurosci. 11, 161-172.
-
(1998)
Mol. Cell. Neurosci
, vol.11
, pp. 161-172
-
-
Kurschner, C.1
Mermelstein, P.G.2
Holden, W.T.3
Surmeier, D.J.4
-
12
-
-
0037816293
-
Molecular roots of degenerate specificity in syntenin's PDZ2 domain: Reassessment of the PDZ recognition paradigm
-
Kang, B. S., Cooper, D. R., Devedjiev, Y., Derewenda, U., and Derewenda, Z. S. (2003) Molecular roots of degenerate specificity in syntenin's PDZ2 domain: Reassessment of the PDZ recognition paradigm. Structure 11, 845-853.
-
(2003)
Structure
, vol.11
, pp. 845-853
-
-
Kang, B.S.1
Cooper, D.R.2
Devedjiev, Y.3
Derewenda, U.4
Derewenda, Z.S.5
-
13
-
-
15644379801
-
Recognition of unique carboxyl-terminal motifs by distinct PDZ domains
-
Songyang, Z., Fanning,A. S., Fu, C., Xu, J., Marfatia, S. M., Chishti, A. H., Crompton, A., Chan, A. C., Anderson, J. M., and Cantley, L. C. (1997) Recognition of unique carboxyl-terminal motifs by distinct PDZ domains. Science 275, 73-77.
-
(1997)
Science
, vol.275
, pp. 73-77
-
-
Songyang, Z.1
Fanning, A.S.2
Fu, C.3
Xu, J.4
Marfatia, S.M.5
Chishti, A.H.6
Crompton, A.7
Chan, A.C.8
Anderson, J.M.9
Cantley, L.C.10
-
14
-
-
0036301446
-
Solution structure of the PDZ2 domain from cytosolic human phosphatase hPTP1E complexed with a peptide reveals contribution of the β2-β3 loop to PDZ domain-ligand interactions
-
Kozlov, G., Banville, D., Gehring, K., and Ekiel, I. (2002) Solution structure of the PDZ2 domain from cytosolic human phosphatase hPTP1E complexed with a peptide reveals contribution of the β2-β3 loop to PDZ domain-ligand interactions. J. Mol. Biol. 320, 813-820.
-
(2002)
J. Mol. Biol
, vol.320
, pp. 813-820
-
-
Kozlov, G.1
Banville, D.2
Gehring, K.3
Ekiel, I.4
-
15
-
-
0037449799
-
Novel mode of ligand recognition by the Erbin PDZ domain
-
Birrane, G., Chung, J., and Ladias, J. A. (2003) Novel mode of ligand recognition by the Erbin PDZ domain. J. Biol. Chem. 278, 1399-1402.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 1399-1402
-
-
Birrane, G.1
Chung, J.2
Ladias, J.A.3
-
16
-
-
53149149836
-
Par-3-mediated junctional localization of the lipid phosphatase PTEN is required for cell polarity establishment
-
Feng, W., Wu, H., Chan, L. N., and Zhang,M. (2008) Par-3-mediated junctional localization of the lipid phosphatase PTEN is required for cell polarity establishment. J. Biol. Chem. 283, 23440-23449.
-
(2008)
J. Biol. Chem
, vol.283
, pp. 23440-23449
-
-
Feng, W.1
Wu, H.2
Chan, L.N.3
Zhang, M.4
-
17
-
-
0035898658
-
The cell polarity protein ASIP/PAR-3 directly associates with junctional adhesion molecule (JAM)
-
Ebnet, K., Suzuki, A., Horikoshi, Y., Hirose, T., Meyer Zu Brickwedde, M. K., Ohno, S., and Vestweber, D. (2001) The cell polarity protein ASIP/PAR-3 directly associates with junctional adhesion molecule (JAM). EMBO J. 20, 3738-3748.
-
(2001)
EMBO J
, vol.20
, pp. 3738-3748
-
-
Ebnet, K.1
Suzuki, A.2
Horikoshi, Y.3
Hirose, T.4
Meyer Zu Brickwedde, M.K.5
Ohno, S.6
Vestweber, D.7
-
18
-
-
0037458707
-
Direct binding of cell polarity protein PAR-3 to cell-cell adhesion molecule nectin at neuroepithelial cells of developing mouse
-
Takekuni, K., Ikeda, W., Fujito, T., Morimoto, K., Takeuchi, M., Monden, M., and Takai, Y. (2003) Direct binding of cell polarity protein PAR-3 to cell-cell adhesion molecule nectin at neuroepithelial cells of developing mouse. J. Biol. Chem. 278, 5497-5500.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 5497-5500
-
-
Takekuni, K.1
Ikeda, W.2
Fujito, T.3
Morimoto, K.4
Takeuchi, M.5
Monden, M.6
Takai, Y.7
-
19
-
-
20544462579
-
G-protein-activated phospholipase C-β, new partners for cell polarity proteins Par3 and Par6
-
Cai, Y., Stafford, L. J., Bryan, B. A., Mitchell, D., and Liu, M. (2005) G-protein-activated phospholipase C-β, new partners for cell polarity proteins Par3 and Par6. Oncogene 24, 4293-4300.
-
(2005)
Oncogene
, vol.24
, pp. 4293-4300
-
-
Cai, Y.1
Stafford, L.J.2
Bryan, B.A.3
Mitchell, D.4
Liu, M.5
-
20
-
-
36749070993
-
PDZ domains of Par-3 as potential phosphoinositide signaling integrators
-
Wu, H., Feng, W., Chen, J., Chan, L. N., Huang, S., and Zhang, M. (2007) PDZ domains of Par-3 as potential phosphoinositide signaling integrators. Mol. Cell 28, 886-898.
-
(2007)
Mol. Cell
, vol.28
, pp. 886-898
-
-
Wu, H.1
Feng, W.2
Chen, J.3
Chan, L.N.4
Huang, S.5
Zhang, M.6
-
21
-
-
12444336848
-
The junctional adhesion molecule (JAM) family members JAM-2 and JAM-3 associate with the cell polarity protein PAR-3: A possible role for JAMs in endothelial cell polarity
-
Ebnet, K., Aurrand-Lions, M., Kuhn, A., Kiefer, F., Butz, S., Zander, K., Meyer zu Brickwedde, M. K., Suzuki, A., Imhof, B. A., and Vestweber, D. (2003) The junctional adhesion molecule (JAM) family members JAM-2 and JAM-3 associate with the cell polarity protein PAR-3: A possible role for JAMs in endothelial cell polarity. J. Cell Sci. 116, 3879-3891.
-
(2003)
J. Cell Sci
, vol.116
, pp. 3879-3891
-
-
Ebnet, K.1
Aurrand-Lions, M.2
Kuhn, A.3
Kiefer, F.4
Butz, S.5
Zander, K.6
Meyer zu Brickwedde, M.K.7
Suzuki, A.8
Imhof, B.A.9
Vestweber, D.10
-
22
-
-
33751502144
-
A distinct PAR complex associates physically with VE-cadherin in vertebrate endothelial cells
-
7
-
Iden, S., Rehder, D., August, B., Suzuki, A., Wolburg-Buchholz, K., Wolburg, H., Ohno, S., Behrens, J., Vestweber, D., and Ebnet, K. (2006) A distinct PAR complex associates physically with VE-cadherin in vertebrate endothelial cells. EMBO Rep. 7, 1239-1246.
-
(2006)
EMBO Rep
, pp. 1239-1246
-
-
Iden, S.1
Rehder, D.2
August, B.3
Suzuki, A.4
Wolburg-Buchholz, K.5
Wolburg, H.6
Ohno, S.7
Behrens, J.8
Vestweber, D.9
Ebnet, K.10
-
23
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) NMRPipe: A multidimensional spectral processing system based on UNIX pipes. J. Biomol. NMR 6, 277-293.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
24
-
-
0343459675
-
The program XEASY for Computer-Supported NMR Spectral Analysis of Biological Molecules
-
Bartels, C., Xia, T., Billeter, M.,G̈untert, P., and Ẅuthrich, K. (1995) The program XEASY for Computer-Supported NMR Spectral Analysis of Biological Molecules. J. Biomol. NMR 6, 277-293.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Bartels, C.1
Xia, T.2
Billeter, M.3
G̈untert, P.4
Ẅuthrich, K.5
-
26
-
-
0033003335
-
Protein backbone angle restraints from searching a database for chemical shift and sequence homology
-
Cornilescu, G., Delaglio, F., and Bax, A. (1999) Protein backbone angle restraints from searching a database for chemical shift and sequence homology. J. Biomol. NMR 13, 289-302.
-
(1999)
J. Biomol. NMR
, vol.13
, pp. 289-302
-
-
Cornilescu, G.1
Delaglio, F.2
Bax, A.3
-
27
-
-
4644340524
-
Automated NMR structure calculation with CYANA
-
Guntert, P. (2004) Automated NMR structure calculation with CYANA. Methods Mol. Biol. 278, 353-378.
-
(2004)
Methods Mol. Biol
, vol.278
, pp. 353-378
-
-
Guntert, P.1
-
28
-
-
0037441524
-
Refinement of protein structures in explicit solvent
-
Linge, J. P., Williams, M. A., Spronk, C. A., Bonvin, A. M., and Nilges, M. (2003) Refinement of protein structures in explicit solvent. Proteins 50, 496-506.
-
(2003)
Proteins
, vol.50
, pp. 496-506
-
-
Linge, J.P.1
Williams, M.A.2
Spronk, C.A.3
Bonvin, A.M.4
Nilges, M.5
-
29
-
-
0013293280
-
The Xplor-NIH NMR molecular structure determination package
-
Schwieters, C. D., Kuszewski, J. J., Tjandra, N., and Clore, G. M. (2003) The Xplor-NIH NMR molecular structure determination package. J. Magn. Reson. 160, 65-73.
-
(2003)
J. Magn. Reson
, vol.160
, pp. 65-73
-
-
Schwieters, C.D.1
Kuszewski, J.J.2
Tjandra, N.3
Clore, G.M.4
-
30
-
-
2942564430
-
Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence
-
Blom, N., Sicheritz-Ponten, T., Gupta, R., Gammeltoft, S., and Brunak, S. (2004) Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence. Proteomics 4, 1633-1649.
-
(2004)
Proteomics
, vol.4
, pp. 1633-1649
-
-
Blom, N.1
Sicheritz-Ponten, T.2
Gupta, R.3
Gammeltoft, S.4
Brunak, S.5
-
31
-
-
0035861856
-
Classification of PDZ domains
-
Bezprozvanny, I., and Maximov, A. (2001) Classification of PDZ domains. FEBS Lett. 509, 457-462.
-
(2001)
FEBS Lett
, vol.509
, pp. 457-462
-
-
Bezprozvanny, I.1
Maximov, A.2
|