-
1
-
-
53849093455
-
Cell biology of HIV-1 infection of macrophages
-
Carter, C. A., Ehrlich, L. S., Cell biology of HIV-1 infection of macrophages. Annu. Rev. Microbiol. 2008, 62, 425-443.
-
(2008)
Annu. Rev. Microbiol
, vol.62
, pp. 425-443
-
-
Carter, C.A.1
Ehrlich, L.S.2
-
2
-
-
44649139364
-
HIV-1 accessory proteins - Ensuring viral survival in a hostile environment
-
Malim, M. H., Emerman, M., HIV-1 accessory proteins - Ensuring viral survival in a hostile environment. Cell Host Microbe 2008, 3, 388-398.
-
(2008)
Cell Host Microbe
, vol.3
, pp. 388-398
-
-
Malim, M.H.1
Emerman, M.2
-
3
-
-
65549143688
-
Cell-to-cell HIV-1 spread and its implications for immune evasion
-
Martin, N., Sattentau, Q., Cell-to-cell HIV-1 spread and its implications for immune evasion. Curr. Opin. HIV AIDS 2009, 4, 143-149.
-
(2009)
Curr. Opin. HIV AIDS
, vol.4
, pp. 143-149
-
-
Martin, N.1
Sattentau, Q.2
-
4
-
-
39349097864
-
Identification of host proteins required for HIV infection through a functional genomic screen
-
Brass, A. L., Dykxhoorn, D. M., Benita, Y., Yan, N. et al., Identification of host proteins required for HIV infection through a functional genomic screen. Science 2008, 319, 921-926.
-
(2008)
Science
, vol.319
, pp. 921-926
-
-
Brass, A.L.1
Dykxhoorn, D.M.2
Benita, Y.3
Yan, N.4
-
5
-
-
52949130695
-
Global analysis of host-pathogen interactions that regulate earlystage HIV-1 replication
-
Konig, R., Zhou, Y., Elleder, D., Diamond, T. L. et al., Global analysis of host-pathogen interactions that regulate earlystage HIV-1 replication. Cell 2008, 135, 49-60.
-
(2008)
Cell
, vol.135
, pp. 49-60
-
-
Konig, R.1
Zhou, Y.2
Elleder, D.3
Diamond, T.L.4
-
6
-
-
55249088255
-
Genome-scale RNAi screen for host factors required for HIV replication
-
Zhou, H., Xu, M., Huang, Q., Gates, A.T. et al., Genome-scale RNAi screen for host factors required for HIV replication. Cell Host Microbe 2008, 4, 495-504.
-
(2008)
Cell Host Microbe
, vol.4
, pp. 495-504
-
-
Zhou, H.1
Xu, M.2
Huang, Q.3
Gates, A.T.4
-
7
-
-
67249143012
-
-
Bushman, F. D., Malani, N., Fernandes, J., D'Orso, I. et al., Host cell factors in HIV replication: meta-analysis of genome-wide studies. PLoS Pathog. 2009, 5, e1000437.
-
Bushman, F. D., Malani, N., Fernandes, J., D'Orso, I. et al., Host cell factors in HIV replication: meta-analysis of genome-wide studies. PLoS Pathog. 2009, 5, e1000437.
-
-
-
-
8
-
-
54549091050
-
Knockdown screens to knockout HIV-1
-
Goff, S.P., Knockdown screens to knockout HIV-1. Cell 2008, 135, 417-420.
-
(2008)
Cell
, vol.135
, pp. 417-420
-
-
Goff, S.P.1
-
9
-
-
68049093863
-
Illuminating the host - How RNAi screens shed light on host-pathogen interactions
-
Prudencio, M., Lehmann, M. J., Illuminating the host - How RNAi screens shed light on host-pathogen interactions. Biotechnol. J. 2009, 4, 826-837.
-
(2009)
Biotechnol. J
, vol.4
, pp. 826-837
-
-
Prudencio, M.1
Lehmann, M.J.2
-
10
-
-
34347220153
-
Reverse transfection on cell arrays for high content screening microscopy
-
Erfle, H., Neumann, B., Liebel, U., Rogers, P. et al., Reverse transfection on cell arrays for high content screening microscopy. Nat. Protoc. 2007, 2, 392-399.
-
(2007)
Nat. Protoc
, vol.2
, pp. 392-399
-
-
Erfle, H.1
Neumann, B.2
Liebel, U.3
Rogers, P.4
-
11
-
-
49249126411
-
Work flow for multiplexing siRNA assays by solid-phase reverse transfection in multiwell plates
-
Erfle, H., Neumann, B., Rogers, P., Bulkescher, J. et al., Work flow for multiplexing siRNA assays by solid-phase reverse transfection in multiwell plates. J. Biomol. Screen. 2008, 13, 575-580.
-
(2008)
J. Biomol. Screen
, vol.13
, pp. 575-580
-
-
Erfle, H.1
Neumann, B.2
Rogers, P.3
Bulkescher, J.4
-
12
-
-
0036066508
-
siRNA-directed inhibition of HIV-1 infection
-
Novina, C. D., Murray, M. F., Dykxhoorn, D. M., Beresford, P. J. et al., siRNA-directed inhibition of HIV-1 infection. Nat. Med. 2002, 8, 681-686.
-
(2002)
Nat. Med
, vol.8
, pp. 681-686
-
-
Novina, C.D.1
Murray, M.F.2
Dykxhoorn, D.M.3
Beresford, P.J.4
-
13
-
-
0031716336
-
Virion incorporation of human immunodeficiency virus type 1 Nef is mediated by a bipartite membrane-targeting signal: Analysis of its role in enhancement of viral infectivity
-
Welker, R., Harris, M., Cardel, B., Krausslich, H.G., Virion incorporation of human immunodeficiency virus type 1 Nef is mediated by a bipartite membrane-targeting signal: Analysis of its role in enhancement of viral infectivity. J. Virol. 1998, 72, 8833-8840.
-
(1998)
J. Virol
, vol.72
, pp. 8833-8840
-
-
Welker, R.1
Harris, M.2
Cardel, B.3
Krausslich, H.G.4
-
15
-
-
0018306059
-
A threshold selection method from grey level histograms
-
Otsu, N., A threshold selection method from grey level histograms. IEEE Trans. Systems Man Cybernetics 1979, 9, 62-66.
-
(1979)
IEEE Trans. Systems Man Cybernetics
, vol.9
, pp. 62-66
-
-
Otsu, N.1
-
16
-
-
0011384911
-
A comparison of methods for estimation of intensity nonuniformities in 2D and 3D microscope images of fluorescence stained cells
-
Lindblad, J., Bengtsson, E., A comparison of methods for estimation of intensity nonuniformities in 2D and 3D microscope images of fluorescence stained cells. Proceedings of the 12th Scandinavian Conference on Image Analysis (SCIA) 2001, 264-271.
-
(2001)
Proceedings of the 12th Scandinavian Conference on Image Analysis (SCIA)
, pp. 264-271
-
-
Lindblad, J.1
Bengtsson, E.2
-
17
-
-
84936916896
-
Robust locally weighted regression and smoothing scatterplots
-
Cleveland, W. S., Robust locally weighted regression and smoothing scatterplots. J. Am. Stat. Assoc. 1979, 829-836.
-
(1979)
J. Am. Stat. Assoc
, pp. 829-836
-
-
Cleveland, W.S.1
-
18
-
-
3242669872
-
Improved statistical methods for hit selection in high-throughput screening
-
Brideau, C., Gunter, B., Pikounis, B., Liaw, A., Improved statistical methods for hit selection in high-throughput screening. J. Biomol. Screen. 2003, 8, 634-647.
-
(2003)
J. Biomol. Screen
, vol.8
, pp. 634-647
-
-
Brideau, C.1
Gunter, B.2
Pikounis, B.3
Liaw, A.4
-
19
-
-
33749381471
-
Analysis of cell-based RNAi screens
-
Boutros, M., Bras, L. P., Huber, W., Analysis of cell-based RNAi screens. Genome Biol. 2006, 7, R66.
-
(2006)
Genome Biol
, vol.7
-
-
Boutros, M.1
Bras, L.P.2
Huber, W.3
-
20
-
-
32344448950
-
Statistical practice in high-throughput screening data analysis
-
Malo, N., Hanley, J. A., Cerquozzi, S., Pelletier, J., Nadon, R., Statistical practice in high-throughput screening data analysis. Nat. Biotechnol. 2006, 24, 167-175.
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 167-175
-
-
Malo, N.1
Hanley, J.A.2
Cerquozzi, S.3
Pelletier, J.4
Nadon, R.5
-
21
-
-
61449164033
-
RNAither, an automated pipeline for the statistical analysis of highthroughput RNAi screens
-
Rieber, N., Knapp, B., Eils, R., Kaderali, L., RNAither, an automated pipeline for the statistical analysis of highthroughput RNAi screens. Bioinformatics 2009, 25, 678-679.
-
(2009)
Bioinformatics
, vol.25
, pp. 678-679
-
-
Rieber, N.1
Knapp, B.2
Eils, R.3
Kaderali, L.4
-
22
-
-
13444272087
-
Gene-centered information at NCBI
-
Maglott, D., Ostell, J., Pruitt, K. D., Tatusova, T., Entrez Gene: Gene-centered information at NCBI. Nucleic Acids Res. 2005, 33, D54-58.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Maglott, D.1
Ostell, J.2
Pruitt, K.3
Tatusova, D.4
Entrez Gene, T.5
-
23
-
-
33846057724
-
A curated non-redundant sequence database of genomes, transcripts and proteins
-
NCBI reference sequences RefSeq
-
Pruitt, K. D., Tatusova, T., Maglott, D. R., NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res. 2007, 35, D61-65.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Pruitt, K.D.1
Tatusova, T.2
Maglott, D.R.3
-
24
-
-
58149185123
-
-
Ensembl
-
Hubbard, T. J., Aken, B. L., Ayling, S., Ballester, B. et al., Ensembl 2009. Nucleic Acids Res. 2009, 37, D690-697.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Hubbard, T.J.1
Aken, B.L.2
Ayling, S.3
Ballester, B.4
-
25
-
-
33644875050
-
The HUGO Gene Nomenclature Database, 2006 updates
-
Eyre, T. A., Ducluzeau, F., Sneddon, T. P., Povey, S. et al., The HUGO Gene Nomenclature Database, 2006 updates. Nucleic Acids Res. 2006, 34, D319-321.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Eyre, T.A.1
Ducluzeau, F.2
Sneddon, T.P.3
Povey, S.4
-
26
-
-
38549097071
-
The universal protein resource (UniProt)
-
The universal protein resource (UniProt). Nucleic Acids Res. 2008, 36, D190-195.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
-
27
-
-
0033982936
-
Kyoto encyclopedia of genes and genomes
-
KEGG
-
Kanehisa, M., Goto, S., KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000, 28, 27-30.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
28
-
-
33745626459
-
Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
-
Alexa, A., Rahnenfuhrer, J., Lengauer, T., Improved scoring of functional groups from gene expression data by decorrelating GO graph structure. Bioinformatics 2006, 22, 1600-1607.
-
(2006)
Bioinformatics
, vol.22
, pp. 1600-1607
-
-
Alexa, A.1
Rahnenfuhrer, J.2
Lengauer, T.3
-
29
-
-
0141742293
-
A library of protein families and subfamilies indexed by function
-
PANTHER
-
Thomas, P. D., Campbell, M. J., Kejariwal, A., Mi, H. et al., PANTHER:A library of protein families and subfamilies indexed by function. Genome Res. 2003, 13, 2129-2141.
-
(2003)
Genome Res
, vol.13
, pp. 2129-2141
-
-
Thomas, P.D.1
Campbell, M.J.2
Kejariwal, A.3
Mi, H.4
-
30
-
-
33947419351
-
An evaluation of human protein-protein interaction data in the public domain
-
Mathivanan, S., Periaswamy, B., Gandhi, T. K., Kandasamy, K. et al., An evaluation of human protein-protein interaction data in the public domain. BMC Bioinformatics 2006, 7 Suppl 5, S19.
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.SUPPL. 5
-
-
Mathivanan, S.1
Periaswamy, B.2
Gandhi, T.K.3
Kandasamy, K.4
-
31
-
-
33644877439
-
Human protein reference database - 2006 update
-
Mishra, G. R., Suresh, M., Kumaran, K., Kannabiran, N. et al., Human protein reference database - 2006 update. Nucleic Acids Res. 2006, 34, D411-414.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Mishra, G.R.1
Suresh, M.2
Kumaran, K.3
Kannabiran, N.4
-
32
-
-
58149193234
-
STRING 8 - A global view on proteins and their functional interactions in 630 organisms
-
Jensen, L. J., Kuhn, M., Stark, M., Chaffron, S. et al., STRING 8 - A global view on proteins and their functional interactions in 630 organisms. Nucleic Acids Res. 2009, 37, D412-416.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Jensen, L.J.1
Kuhn, M.2
Stark, M.3
Chaffron, S.4
-
33
-
-
0242490780
-
Cytoscape: A software environment for integrated models of biomolecular interaction networks
-
Shannon, P., Markiel, A., Ozier, O., Baliga, N. S. et al., Cytoscape: A software environment for integrated models of biomolecular interaction networks. Genome Res. 2003, 13, 2498-2504.
-
(2003)
Genome Res
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
-
34
-
-
58149107292
-
Cataloguing the HIV type 1 human protein interaction network
-
Ptak, R.G., Fu, W., Sanders-Beer, B. E., Dickerson, J. E. et al., Cataloguing the HIV type 1 human protein interaction network. AIDS Res. Hum. Retroviruses 2008, 24, 1497-1502.
-
(2008)
AIDS Res. Hum. Retroviruses
, vol.24
, pp. 1497-1502
-
-
Ptak, R.G.1
Fu, W.2
Sanders-Beer, B.E.3
Dickerson, J.E.4
|