메뉴 건너뛰기




Volumn 76, Issue 1, 2010, Pages 37-42

Haplotype diversity and molecular evolution of the rice Pikm locus for blast resistance

Author keywords

Allele variation; Evolution; Resistance gene Pikm; Rice blast

Indexed keywords


EID: 75549087747     PISSN: 13452630     EISSN: 1610739X     Source Type: Journal    
DOI: 10.1007/s10327-009-0213-x     Document Type: Article
Times cited : (8)

References (33)
  • 1
    • 61849179574 scopus 로고    scopus 로고
    • Two adjacent nucleotide-binding site-leucine-rich repeat class genes are required to confer Pikm-specific rice blast resistance
    • Ashikawa I, Hayashi N, Yamane H, Kanamori H, Wu J, Matsumoto T, Ono K, Yano M (2008) Two adjacent nucleotide-binding site-leucine-rich repeat class genes are required to confer Pikm-specific rice blast resistance. Genetics 180: 2267-2276.
    • (2008) Genetics , vol.180 , pp. 2267-2276
    • Ashikawa, I.1    Hayashi, N.2    Yamane, H.3    Kanamori, H.4    Wu, J.5    Matsumoto, T.6    Ono, K.7    Yano, M.8
  • 4
    • 0033524389 scopus 로고    scopus 로고
    • Diversity and molecular evolution of the Rps2 resistance gene in Arabidopsis thaliana
    • Caicedo AL, Schaal BA, Kunkel BN (1999) Diversity and molecular evolution of the Rps2 resistance gene in Arabidopsis thaliana. Proc Natl Acad Sci USA 96: 302-306.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 302-306
    • Caicedo, A.L.1    Schaal, B.A.2    Kunkel, B.N.3
  • 5
    • 33846272114 scopus 로고    scopus 로고
    • Plant NBS-LRR proteins in pathogen sensing and host defense
    • DeYoung BJ, Innes RW (2006) Plant NBS-LRR proteins in pathogen sensing and host defense. Nat Immunol 7: 1243-1249.
    • (2006) Nat Immunol , vol.7 , pp. 1243-1249
    • Deyoung, B.J.1    Innes, R.W.2
  • 6
    • 58849123176 scopus 로고    scopus 로고
    • Refunctionalization of the ancient rice blast disease resistance gene Pit by the recruitment of a retrotransposon as a promoter
    • Hayashi K, Yoshida H (2008) Refunctionalization of the ancient rice blast disease resistance gene Pit by the recruitment of a retrotransposon as a promoter. Plant J 57: 413-425.
    • (2008) Plant J , vol.57 , pp. 413-425
    • Hayashi, K.1    Yoshida, H.2
  • 7
    • 2442557312 scopus 로고    scopus 로고
    • Development of PCR-based SNP markers for rice blast resistance genes at the Piz locus
    • Hayashi K, Hashimoto N, Daigen M, Ashikawa I (2004) Development of PCR-based SNP markers for rice blast resistance genes at the Piz locus. Theor Appl Genet 108: 1212-1220.
    • (2004) Theor Appl Genet , vol.108 , pp. 1212-1220
    • Hayashi, K.1    Hashimoto, N.2    Daigen, M.3    Ashikawa, I.4
  • 8
    • 33745508915 scopus 로고    scopus 로고
    • Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes
    • Hayashi K, Yoshida H, Ashikawa I (2006) Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes. Theor Appl Genet 113: 251-260.
    • (2006) Theor Appl Genet , vol.113 , pp. 251-260
    • Hayashi, K.1    Yoshida, H.2    Ashikawa, I.3
  • 9
    • 52049095460 scopus 로고    scopus 로고
    • Molecular evolution of the Pi-ta gene resistant to rice blast in wild rice (Oryza rufipogon)
    • Huang C-L, Hwang S-Y, Chiang Y-C, Lin T-P (2008) Molecular evolution of the Pi-ta gene resistant to rice blast in wild rice (Oryza rufipogon). Genetics 179: 1527-1538.
    • (2008) Genetics , vol.179 , pp. 1527-1538
    • Huang, C.-L.1    Hwang, S.-Y.2    Chiang, Y.-C.3    Lin, T.-P.4
  • 11
    • 0000603853 scopus 로고
    • Classification of Japanese rice varieties into Indica and Japonica types by using isozyme genotypes (in Japanese with English summary)
    • Ishikawa R, Maeda K, Harada T, Niizeki M, Saito K (1991) Classification of Japanese rice varieties into Indica and Japonica types by using isozyme genotypes (in Japanese with English summary). Jpn J Breed 41: 605-622.
    • (1991) Jpn J Breed , vol.41 , pp. 605-622
    • Ishikawa, R.1    Maeda, K.2    Harada, T.3    Niizeki, M.4    Saito, K.5
  • 12
    • 33751100626 scopus 로고    scopus 로고
    • The plant immune system
    • Jones JDG, Dangl JL (2006) The plant immune system. Nature 444: 323-329.
    • (2006) Nature , vol.444 , pp. 323-329
    • Jones, J.D.G.1    Dangl, J.L.2
  • 13
    • 75549085959 scopus 로고    scopus 로고
    • Developing rice blast differential lines and evaluating partial resistance for the breeding of durable rice varieties in the tropics
    • In: Nozoe T, Fukuta Y, Hardy B (eds), Proceedings No. 10. IRRI Limited, Los Baños, Philippines
    • Kato H, Imbe T, Tsunematsu H, Fukuta Y (2004) Developing rice blast differential lines and evaluating partial resistance for the breeding of durable rice varieties in the tropics. In: Nozoe T, Fukuta Y, Hardy B (eds) Blessings from nature and science for the future. Proceedings No. 10. IRRI Limited, Los Baños, Philippines, pp 31-44.
    • (2004) Blessings from Nature and Science for the Future , pp. 31-44
    • Kato, H.1    Imbe, T.2    Tsunematsu, H.3    Fukuta, Y.4
  • 14
    • 61849147262 scopus 로고
    • Inheritance of blast-resistance in some Chinese rice varieties and their derivatives
    • Kiyosawa S (1968) Inheritance of blast-resistance in some Chinese rice varieties and their derivatives. Jpn J Breed 18: 193-204.
    • (1968) Jpn J Breed , vol.18 , pp. 193-204
    • Kiyosawa, S.1
  • 15
    • 0002473022 scopus 로고
    • Inheritance of resistance of rice varieties to a Philippine fungus strain of Pyricularia oryzae
    • Kiyosawa S (1969a) Inheritance of resistance of rice varieties to a Philippine fungus strain of Pyricularia oryzae. Jpn J Breed 19: 61-73.
    • (1969) Jpn J Breed , vol.19 , pp. 61-73
    • Kiyosawa, S.1
  • 16
    • 0007933906 scopus 로고
    • Inheritance of blast-resistance in west Pakistani rice variety, Pusur
    • Kiyosawa S (1969b) Inheritance of blast-resistance in west Pakistani rice variety, Pusur. Jpn J Breed 19: 121-128.
    • (1969) Jpn J Breed , vol.19 , pp. 121-128
    • Kiyosawa, S.1
  • 17
    • 0007986081 scopus 로고
    • Identification of blast-resistance genes in some rice varieties
    • Kiyosawa S (1978) Identification of blast-resistance genes in some rice varieties. Jpn J Breed 28: 287-296.
    • (1978) Jpn J Breed , vol.28 , pp. 287-296
    • Kiyosawa, S.1
  • 19
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
    • Librado P, Rozas J (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451-1452.
    • (2009) Bioinformatics , vol.25 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 20
    • 0142057020 scopus 로고    scopus 로고
    • Understanding the functions of plant disease resistance proteins
    • Martin GB, Bogdanove AJ, Sessa G (2003) Understanding the functions of plant disease resistance proteins. Annu Rev Plant Biol 54: 23-61.
    • (2003) Annu Rev Plant Biol , vol.54 , pp. 23-61
    • Martin, G.B.1    Bogdanove, A.J.2    Sessa, G.3
  • 21
    • 0037297577 scopus 로고    scopus 로고
    • Natural selection for polymorphism in the disease resistance gene Rps2 of Arabidopsis thaliana
    • Mauricio R, Stahl EA, Korves T, Tian D, Kreitman M, Bergelson J (2003) Natural selection for polymorphism in the disease resistance gene Rps2 of Arabidopsis thaliana. Genetics 163: 735-746.
    • (2003) Genetics , vol.163 , pp. 735-746
    • Mauricio, R.1    Stahl, E.A.2    Korves, T.3    Tian, D.4    Kreitman, M.5    Bergelson, J.6
  • 23
    • 0002482380 scopus 로고
    • Intervarietal variation and classification of cultivated rice
    • Oka HI (1958) Intervarietal variation and classification of cultivated rice. Indian J Genet Plant Breed 18: 79-89.
    • (1958) Indian J Genet Plant Breed , vol.18 , pp. 79-89
    • Oka, H.I.1
  • 24
    • 33645316491 scopus 로고    scopus 로고
    • The broad-spectrum blast gene Pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice
    • Qu S, Liu G, Zhou B, Bellizzi M, Zeng L, Dai L, Han B, Wang G-L (2006) The broad-spectrum blast gene Pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice. Genetics 172: 1901-1914.
    • (2006) Genetics , vol.172 , pp. 1901-1914
    • Qu, S.1    Liu, G.2    Zhou, B.3    Bellizzi, M.4    Zeng, L.5    Dai, L.6    Han, B.7    Wang, G.-L.8
  • 25
    • 1942485896 scopus 로고    scopus 로고
    • The maintenance of extreme amino acid diversity at the disease resistance gene, Rpp13, in Arabidopsis thaliana
    • Rose LE, Bittner-Eddy PD, Langley CH, Holub EB, Michelmore RW, Beynon JL (2004) The maintenance of extreme amino acid diversity at the disease resistance gene, Rpp13, in Arabidopsis thaliana. Genetics 166: 1517-1527.
    • (2004) Genetics , vol.166 , pp. 1517-1527
    • Rose, L.E.1    Bittner-Eddy, P.D.2    Langley, C.H.3    Holub, E.B.4    Michelmore, R.W.5    Beynon, J.L.6
  • 26
    • 4644361662 scopus 로고    scopus 로고
    • Allelic and haplotypic diversity at the Rp1 rust resistance locus of maize
    • Smith SM, Pryor AJ, Hulbert SH (2004) Allelic and haplotypic diversity at the Rp1 rust resistance locus of maize. Genetics 167: 1939-1947.
    • (2004) Genetics , vol.167 , pp. 1939-1947
    • Smith, S.M.1    Pryor, A.J.2    Hulbert, S.H.3
  • 28
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 29
    • 0027968068 scopus 로고
    • CLUSTALW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 30
    • 57449100710 scopus 로고    scopus 로고
    • Haplotype diversity at the Pi-ta locus in cultivated rice and its wild relatives
    • Wang X, Jia Y, Shu QY, Wu D (2008) Haplotype diversity at the Pi-ta locus in cultivated rice and its wild relatives. Phytopathology 98: 1305-1311.
    • (2008) Phytopathology , vol.98 , pp. 1305-1311
    • Wang, X.1    Jia, Y.2    Shu, Q.Y.3    Wu, D.4
  • 31
    • 48349118180 scopus 로고    scopus 로고
    • Efficient authentic fine mapping of the rice blast resistance gene Pik-h in the Pik cluster, using new Pik-h-differentiating isolates
    • Xu X, Hayashi N, Wang CT, Kato H, Fujimura T, Kawasaki S (2008) Efficient authentic fine mapping of the rice blast resistance gene Pik-h in the Pik cluster, using new Pik-h-differentiating isolates. Mol Breed 22: 289-299.
    • (2008) Mol Breed , vol.22 , pp. 289-299
    • Xu, X.1    Hayashi, N.2    Wang, C.T.3    Kato, H.4    Fujimura, T.5    Kawasaki, S.6
  • 33
    • 33845644131 scopus 로고    scopus 로고
    • The genomic dynamics and evolutionary mechanism of the Pi2/9 locus in rice
    • Zhou B, Dolan M, Sakai H, Wang G-L (2007) The genomic dynamics and evolutionary mechanism of the Pi2/9 locus in rice. Mol Plant Microbe Interact 20: 63-71.
    • (2007) Mol Plant Microbe Interact , vol.20 , pp. 63-71
    • Zhou, B.1    Dolan, M.2    Sakai, H.3    Wang, G.-L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.