메뉴 건너뛰기




Volumn 19, Issue SUPPL. 1, 2010, Pages 91-98

The distribution of microsatellites in the Nasonia parasitoid wasp genome

Author keywords

Arthropods; Comparative analysis; Evolutionary genomics; Microsatellites; Nasonia

Indexed keywords

MICROSATELLITE DNA;

EID: 74549206771     PISSN: 09621075     EISSN: 13652583     Source Type: Journal    
DOI: 10.1111/j.1365-2583.2009.00915.x     Document Type: Article
Times cited : (38)

References (56)
  • 1
    • 46949086201 scopus 로고    scopus 로고
    • Body temperature predicts maximum microsatellite length in mammals
    • Amos, W. and Clarke, A. (2008) Body temperature predicts maximum microsatellite length in mammals. Biol Lett 4: 399-401.
    • (2008) Biol Lett , vol.4 , pp. 399-401
    • Amos, W.1    Clarke, A.2
  • 2
    • 33846074290 scopus 로고    scopus 로고
    • InSatDb: A microsatellite database of fully sequenced insect genomes
    • Archak, S., Meduri, E., Kumar, P.S. and Nagaraju, J. (2007) InSatDb: A microsatellite database of fully sequenced insect genomes. Nucleic Acids Res 35: D36-D39.
    • (2007) Nucleic Acids Res , vol.35
    • Archak, S.1    Meduri, E.2    Kumar, P.S.3    Nagaraju, J.4
  • 3
    • 0029584496 scopus 로고
    • Trinucleotide repeat expansion and human disease
    • Ashley, C. and Warren, S. (1995) Trinucleotide repeat expansion and human disease. Annu Rev Genet 29: 703-728.
    • (1995) Annu Rev Genet , vol.29 , pp. 703-728
    • Ashley, C.1    Warren, S.2
  • 5
    • 40549102169 scopus 로고    scopus 로고
    • High frequency of microsatellites in S. cerevisiae meiotic recombination hotspots
    • Bagshaw, A., Pitt, J. Gemmell, N. (2008) High frequency of microsatellites in S. cerevisiae meiotic recombination hotspots. BMC Genomics 9 : 49.
    • (2008) BMC Genomics , vol.9 , pp. 49
    • Bagshaw, A.1    Pitt, J.2    Gemmell, N.3
  • 8
    • 0000316105 scopus 로고
    • Hybrid breakdown between two haplodiploid species: The role of nuclear and cytoplasmic genes
    • Breeuwer, J.A.J. Werren, J.H. (1995) Hybrid breakdown between two haplodiploid species: the role of nuclear and cytoplasmic genes. Evolution 49 : 705 717.
    • (1995) Evolution , vol.49 , pp. 705-717
    • Breeuwer, J.A.J.1    Werren, J.H.2
  • 9
    • 34147102774 scopus 로고    scopus 로고
    • Permissive and instructive anterior patterning rely on mRNA localization in the wasp embryo
    • Brent, A.E., Yucel, G., Small, S. Desplan, C. (2007) Permissive and instructive anterior patterning rely on mRNA localization in the wasp embryo. Science 315 : 1841 1843.
    • (2007) Science , vol.315 , pp. 1841-1843
    • Brent, A.E.1    Yucel, G.2    Small, S.3    Desplan, C.4
  • 10
    • 44849096328 scopus 로고    scopus 로고
    • Facultative sex ratio adjustment in natural populations of wasps: Cues of local mate competition and the precision of adaptation
    • Burton-Chellew, M.N., Koevoets, T., Grillenberger, B.K., Sykes, E.M., Underwood, S.L., Bijlsma, K. et al. (2008) Facultative sex ratio adjustment in natural populations of wasps: cues of local mate competition and the precision of adaptation. Am Nat 172 : 393 404.
    • (2008) Am Nat , vol.172 , pp. 393-404
    • Burton-Chellew, M.N.1    Koevoets, T.2    Grillenberger, B.K.3    Sykes, E.M.4    Underwood, S.L.5    Bijlsma, K.6
  • 11
    • 33749991391 scopus 로고    scopus 로고
    • The rise, fall and renaissance of microsatellites in eukaryotic genomes
    • Buschiazzo, E. Gemmell, N. (2006) The rise, fall and renaissance of microsatellites in eukaryotic genomes. Bioessays 28 : 1040 1050.
    • (2006) Bioessays , vol.28 , pp. 1040-1050
    • Buschiazzo, E.1    Gemmell, N.2
  • 12
    • 0027145271 scopus 로고
    • Phylogeny of the Nasonia species complex (Hymenoptera: Pteromalidae) inferred from an internal transcribed spacer (ITS2) and 28S rDNA sequences
    • Campbell, B.C., Steffen-Campbell, J.D. Werren, J.H. (1993) Phylogeny of the Nasonia species complex (Hymenoptera: Pteromalidae) inferred from an internal transcribed spacer (ITS2) and 28S rDNA sequences. Insect Mol Biol 2 : 225 237.
    • (1993) Insect Mol Biol , vol.2 , pp. 225-237
    • Campbell, B.C.1    Steffen-Campbell, J.D.2    Werren, J.H.3
  • 13
    • 84966165296 scopus 로고
    • Sex determination in the Hymenoptera - a review of models and evidence
    • Cook, J.M. (1993) Sex determination in the Hymenoptera - a review of models and evidence. Heredity 71 : 421 435.
    • (1993) Heredity , vol.71 , pp. 421-435
    • Cook, J.M.1
  • 14
    • 0001354734 scopus 로고
    • Evolutionary genetics of hymenoptera
    • Crozier, R.H. (1977) Evolutionary genetics of hymenoptera. Annu Rev Entomol 22 : 263 288.
    • (1977) Annu Rev Entomol , vol.22 , pp. 263-288
    • Crozier, R.H.1
  • 15
    • 0002473233 scopus 로고
    • Adaptive consequences of male-haploidy
    • In. Helle, W. Sabelis, M.W. eds), pp.-201. Elsevier. Amsterdam.
    • Crozier, R.H. (1985) Adaptive consequences of male-haploidy. In Spider Mites. Their Biology, Natural Enemies and Control (Helle, W. Sabelis, M.W., eds), pp. 201 222. Elsevier, Amsterdam.
    • (1985) Spider Mites. Their Biology, Natural Enemies and Control , pp. 222
    • Crozier, R.H.1
  • 16
    • 3042782819 scopus 로고    scopus 로고
    • Microsatellites: Simple sequences with complex evolution
    • Ellegren, H. (2004) Microsatellites: simple sequences with complex evolution. Nat Rev Genet 5 : 435 445.
    • (2004) Nat Rev Genet , vol.5 , pp. 435-445
    • Ellegren, H.1
  • 17
    • 54049123388 scopus 로고    scopus 로고
    • Hybrid breakdown and mitochondrial dysfunction in hybrids of Nasonia parasitoid wasps
    • Ellison, C.K., Niehuis, O. Gadau, J. (2008) Hybrid breakdown and mitochondrial dysfunction in hybrids of Nasonia parasitoid wasps. J Evol Biol 21 : 1844 1851.
    • (2008) J Evol Biol , vol.21 , pp. 1844-1851
    • Ellison, C.K.1    Niehuis, O.2    Gadau, J.3
  • 18
    • 4344582028 scopus 로고    scopus 로고
    • Quantitative trait locus analyses and the study of evolutionary process
    • Erickson, D.L., Fenster, C.B., Stenoien, H.K. Price, D. (2004) Quantitative trait locus analyses and the study of evolutionary process. Mol Ecol 13 : 2505 2522.
    • (2004) Mol Ecol , vol.13 , pp. 2505-2522
    • Erickson, D.L.1    Fenster, C.B.2    Stenoien, H.K.3    Price, D.4
  • 19
    • 0032754042 scopus 로고    scopus 로고
    • Mapping of hybrid incompatibility loci in Nasonia
    • Gadau, J., Werren, J.H. Page, R.E. Jr. (1999) Mapping of hybrid incompatibility loci in Nasonia. Genetics 153 : 1731 1741.
    • (1999) Genetics , vol.153 , pp. 1731-1741
    • Gadau, J.1    Werren, J.H.2    Page, Jr.R.E.3
  • 20
    • 0035989396 scopus 로고    scopus 로고
    • The genetic basis of the interspecific differences in wing size in Nasonia (Hymenoptera; Pteromalidae): Major quantitative trait loci and epistasis
    • Gadau, J., Page, R.E. Werren, J.H. (2002) The genetic basis of the interspecific differences in wing size in Nasonia (Hymenoptera; Pteromalidae): major quantitative trait loci and epistasis. Genet 161 : 673 684.
    • (2002) Genet , vol.161 , pp. 673-684
    • Gadau, J.1    Page, R.E.2    Werren, J.H.3
  • 21
    • 77149171150 scopus 로고    scopus 로고
    • Contrasting patterns of selective constraints in nuclear encoded genes of the oxidative phosphorylation pathway in holometabolous insects and their possible role in hybrid breakdown in Nasonia
    • doi:10.1038/hdy.2009.172.
    • Gibson, J.D., Niehuis, O., Verrelli, B.C. Gadau, J. (2010) Contrasting patterns of selective constraints in nuclear encoded genes of the oxidative phosphorylation pathway in holometabolous insects and their possible role in hybrid breakdown in Nasonia. Heredity, doi:10.1038/hdy.2009.172.
    • (2010) Heredity
    • Gibson, J.D.1    Niehuis, O.2    Verrelli, B.C.3    Gadau, J.4
  • 23
    • 57649165463 scopus 로고    scopus 로고
    • Green, P. (1999) Phrap. http://phrap.org.
    • (1999) Phrap
    • Green, P.1
  • 25
    • 44849105489 scopus 로고    scopus 로고
    • Genetic structure of natural Nasonia vitripennis populations: Validating assumptions of sex-ratio theory
    • Grillenberger, B.K., Koevoets, T., Burton-Chellew, M.N., Sykes, E.M., Shuker, D.M., De Zande, L. et al. (2008) Genetic structure of natural Nasonia vitripennis populations: validating assumptions of sex-ratio theory. Mol Ecol 17 : 2854 2864.
    • (2008) Mol Ecol , vol.17 , pp. 2854-2864
    • Grillenberger, B.K.1    Koevoets, T.2    Burton-Chellew, M.N.3    Sykes, E.M.4    Shuker, D.M.5    De Zande, L.6
  • 26
    • 0043286737 scopus 로고    scopus 로고
    • Inbreeding depression and haplodiploidy: Experimental measures in a parasitoid and comparisons across diploid and haplodiploid insect taxa
    • Henter, H.J. (2003) Inbreeding depression and haplodiploidy: experimental measures in a parasitoid and comparisons across diploid and haplodiploid insect taxa. Evology 57 : 1793 1803.
    • (2003) Evology , vol.57 , pp. 1793-1803
    • Henter, H.J.1
  • 27
    • 13144306071 scopus 로고    scopus 로고
    • Genome-wide association studies for common diseases and complex traits
    • DOI 10.1038/nrg1521
    • Hirschhorn, J. Daly, M. (2005) Genome-wide association studies for common diseases and complex traits. Nat Rev Genet 6 : 95 108. (Pubitemid 40179532)
    • (2005) Nature Reviews Genetics , vol.6 , Issue.2 , pp. 95-108
    • Hirschhorn, J.N.1    Daly, M.J.2
  • 28
    • 0030305457 scopus 로고    scopus 로고
    • R: A language for data analysis and graphics
    • Ihaka, R. Gentleman, R. (1996) R: A language for data analysis and graphics. J Comput Graph Stat 5 : 299 314.
    • (1996) J Comput Graph Stat , vol.5 , pp. 299-314
    • Ihaka, R.1    Gentleman, R.2
  • 29
    • 40649127173 scopus 로고    scopus 로고
    • Distribution and evolution of short tandem repeats in closely related bacterial genomes
    • Kassai-Jager, E., Ortutay, C., Toth, G., Vellai, T. Gaspari, Z. (2008) Distribution and evolution of short tandem repeats in closely related bacterial genomes. Gene 410 : 18 25.
    • (2008) Gene , vol.410 , pp. 18-25
    • Kassai-Jager, E.1    Ortutay, C.2    Toth, G.3    Vellai, T.4    Gaspari, Z.5
  • 30
    • 31344453990 scopus 로고    scopus 로고
    • Regression-based quantitative trait loci mapping: Robust, efficient and effective
    • DOI 10.1098/rstb.2005.1671
    • Knott, S. (2005) Regression-based quantitative trait loci mapping: robust, efficient and effective. Philos Trans R Soc Lond B Biol Sci 360 : 1435 1442. (Pubitemid 43138546)
    • (2005) Philosophical Transactions of the Royal Society B: Biological Sciences , vol.360 , Issue.1459 , pp. 1435-1442
    • Knott, S.A.1
  • 31
    • 25444467752 scopus 로고    scopus 로고
    • Nonrandom distribution and frequencies of genomic and EST-derived microsatellite markers in rice, wheat, and barley
    • La Rota, M., Kantety, R.V., Yu, J.K. Sorrells, M.E. (2005) Nonrandom distribution and frequencies of genomic and EST-derived microsatellite markers in rice, wheat, and barley. BMC Genomics 6 : 23.
    • (2005) BMC Genomics , vol.6 , pp. 23
    • La Rota, M.1    Kantety, R.V.2    Yu, J.K.3    Sorrells, M.E.4
  • 32
    • 32544442896 scopus 로고    scopus 로고
    • Localized maternal orthodenticle patterns anterior and posterior in the long germ wasp Nasonia
    • Lynch, J.A., Brent, A.E., Leaf, D.S., Pultz, M.A. Desplan, C. (2006) Localized maternal orthodenticle patterns anterior and posterior in the long germ wasp Nasonia. Nature 439 : 728 732.
    • (2006) Nature , vol.439 , pp. 728-732
    • Lynch, J.A.1    Brent, A.E.2    Leaf, D.S.3    Pultz, M.A.4    Desplan, C.5
  • 33
    • 0035671407 scopus 로고    scopus 로고
    • The genetic architecture of quantitative traits
    • Mackay, T.F.C. (2001) The genetic architecture of quantitative traits. Annu Rev Genet 35 : 303 339.
    • (2001) Annu Rev Genet , vol.35 , pp. 303-339
    • Mackay, T.F.C.1
  • 35
    • 40849106880 scopus 로고    scopus 로고
    • Cytonuclear genic incompatibilities cause increase mortality in male F2 hybrids of Nasonia giraulti and Nasonia vitripennis
    • Niehuis, O., Judson, A. Gadau, J. (2008) Cytonuclear genic incompatibilities cause increase mortality in male F2 hybrids of Nasonia giraulti and Nasonia vitripennis. Genet 178 : 413 426.
    • (2008) Genet , vol.178 , pp. 413-426
    • Niehuis, O.1    Judson, A.2    Gadau, J.3
  • 37
    • 20144376089 scopus 로고    scopus 로고
    • Two modes of microsatellite instability in human cancer: Differential connection of defective DNA mismatch repair to dinucleotide repeat instability
    • Oda, S., Maehara, Y., Ikeda, Y., Oki, E., Egashira, A., Okamura, Y. et al. (2005) Two modes of microsatellite instability in human cancer: differential connection of defective DNA mismatch repair to dinucleotide repeat instability. Nucleic Acids Res 33 : 1628 1636.
    • (2005) Nucleic Acids Res , vol.33 , pp. 1628-1636
    • Oda, S.1    Maehara, Y.2    Ikeda, Y.3    Oki, E.4    Egashira, A.5    Okamura, Y.6
  • 38
    • 34249328836 scopus 로고    scopus 로고
    • Distinct mechanisms for mRNA localization during embryonic axis specification in the wasp Nasonia
    • Olesnicky, E.C. Desplan, C. (2007) Distinct mechanisms for mRNA localization during embryonic axis specification in the wasp Nasonia. Dev Biol 306 : 134 142.
    • (2007) Dev Biol , vol.306 , pp. 134-142
    • Olesnicky, E.C.1    Desplan, C.2
  • 40
    • 25844438495 scopus 로고    scopus 로고
    • Repeat instability: Mechanisms of dynamic mutations
    • Pearson, C.E., Edamura, K.N. Cleary, J.D. (2005) Repeat instability: mechanisms of dynamic mutations. Nat Rev Genet 6 : 729 742.
    • (2005) Nat Rev Genet , vol.6 , pp. 729-742
    • Pearson, C.E.1    Edamura, K.N.2    Cleary, J.D.3
  • 41
    • 1342309813 scopus 로고    scopus 로고
    • Eleven microsatellite markers in Nasonia, ASHMEAD 1904 (Hymenoptera; Pteromalidae)
    • Pietsch, C., Rutten, K. Gadau, J. (2004) Eleven microsatellite markers in Nasonia, ASHMEAD 1904 (Hymenoptera; Pteromalidae). Mol Ecol Notes 4 : 43 45.
    • (2004) Mol Ecol Notes , vol.4 , pp. 43-45
    • Pietsch, C.1    Rutten, K.2    Gadau, J.3
  • 42
    • 0037352919 scopus 로고    scopus 로고
    • The jewel wasp Nasonia: Querying the genome with haplo-diploid genetics
    • Pultz, M.A. Leaf, D.S. (2003) The jewel wasp Nasonia: querying the genome with haplo-diploid genetics. Genesis 35 : 185 191.
    • (2003) Genesis , vol.35 , pp. 185-191
    • Pultz, M.A.1    Leaf, D.S.2
  • 43
    • 24944437186 scopus 로고    scopus 로고
    • A major role for zygotic hunchback in patterning the Nasonia embryo
    • Pultz, M.A., Westendorf, L., Gale, S.D., Hawkins, K., Lynch, J., Pitt, J.N. et al. (2005) A major role for zygotic hunchback in patterning the Nasonia embryo. Development 132 : 3705 3715.
    • (2005) Development , vol.132 , pp. 3705-3715
    • Pultz, M.A.1    Westendorf, L.2    Gale, S.D.3    Hawkins, K.4    Lynch, J.5    Pitt, J.N.6
  • 44
    • 5344244656 scopus 로고    scopus 로고
    • R Development Core Team. R Foundation for Statistical Computing. Vienna, Austria.
    • R Development Core Team (2008) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org.
    • (2008) R: A Language and Environment for Statistical Computing.
  • 45
    • 0038081260 scopus 로고    scopus 로고
    • Rapid divergence of microsatellite abundance among species of Drosophila
    • Ross, C., Dyer, K., Erez, T., Miller, S., Jaenike, J. Markow, T. (2003) Rapid divergence of microsatellite abundance among species of Drosophila. Mol Biol Evol 20 : 1143 1157.
    • (2003) Mol Biol Evol , vol.20 , pp. 1143-1157
    • Ross, C.1    Dyer, K.2    Erez, T.3    Miller, S.4    Jaenike, J.5    Markow, T.6
  • 46
    • 0008585169 scopus 로고
    • Mutants and linkage in Mormoniella
    • Saul, G.B. Kayhart, M. (1956) Mutants and linkage in Mormoniella. Genet 41 : 930 937.
    • (1956) Genet , vol.41 , pp. 930-937
    • Saul, G.B.1    Kayhart, M.2
  • 47
    • 0347358913 scopus 로고    scopus 로고
    • The evolution of molecular markers - just a matter of fashion?
    • Schlötterer, C. (2004) The evolution of molecular markers - just a matter of fashion? Nat Rev Genet 5 : 63 69.
    • (2004) Nat Rev Genet , vol.5 , pp. 63-69
    • Schlötterer, C.1
  • 48
    • 33645894192 scopus 로고    scopus 로고
    • Microsatellites for ecologists: A practical guide to using and evaluating microsatellite markers
    • Selkoe, K. Toonen, R. (2006) Microsatellites for ecologists: A practical guide to using and evaluating microsatellite markers. Ecol Lett 9 : 615 629.
    • (2006) Ecol Lett , vol.9 , pp. 615-629
    • Selkoe, K.1    Toonen, R.2
  • 49
    • 35648929376 scopus 로고    scopus 로고
    • Mining microsatellites in eukaryotic genomes
    • Sharma, P.C., Grover, A. Kahl, G. (2007) Mining microsatellites in eukaryotic genomes. Trends Biotechnol 25 : 490 498.
    • (2007) Trends Biotechnol , vol.25 , pp. 490-498
    • Sharma, P.C.1    Grover, A.2    Kahl, G.3
  • 50
    • 0027306173 scopus 로고
    • Destabilization of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repair
    • Strand, M., Prolla, T., Liskay, R. Petes, T. (1993) Destabilization of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repair. Nature 365 : 274 276.
    • (1993) Nature , vol.365 , pp. 274-276
    • Strand, M.1    Prolla, T.2    Liskay, R.3    Petes, T.4
  • 52
    • 50049109703 scopus 로고    scopus 로고
    • To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations?
    • Väli, U., Einarsson, A., Waits, L. Ellegren, H. (2008) To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations? Mol Ecol 17 : 3808 3817.
    • (2008) Mol Ecol , vol.17 , pp. 3808-3817
    • Väli, U.1    Einarsson, A.2    Waits, L.3    Ellegren, H.4
  • 53
    • 17844375691 scopus 로고    scopus 로고
    • Genetics of female mate discrimination of heterospecific males in Nasonia (Hymenoptera, Pteromalidae)
    • Velthuis, B.J., Yang, W.C., van Opijnen, T. Werren, J.H. (2005) Genetics of female mate discrimination of heterospecific males in Nasonia (Hymenoptera, Pteromalidae). Anim Behav 69 : 1107 1120.
    • (2005) Anim Behav , vol.69 , pp. 1107-1120
    • Velthuis, B.J.1    Yang, W.C.2    Van Opijnen, T.3    Werren, J.H.4
  • 55
    • 74549184089 scopus 로고    scopus 로고
    • Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    • doi:10.1126/science.1178028.
    • Werren, J.H., Richards, S., Desjardins, C.A., Niehuis, O., Gadau, J., Colbourne, J.K., et al 2010) Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Science, doi:10.1126/science. 1178028.
    • (2010) Science
    • Werren, J.H.1    Richards, S.2    Desjardins, C.A.3    Niehuis, O.4    Gadau, J.5    Colbourne, J.K.6
  • 56
    • 0001181875 scopus 로고
    • The biology of the parasitic wasp Mormoniella vitripennis
    • Whiting, A.R. (1967) The biology of the parasitic wasp Mormoniella vitripennis. Q Rev Biol 42 : 333 406.
    • (1967) Q Rev Biol , vol.42 , pp. 333-406
    • Whiting, A.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.