메뉴 건너뛰기




Volumn 23, Issue 2, 2010, Pages 302-310

Degeneration patterns of the olfactory receptor genes in sea snakes

Author keywords

Environmental adaptation; Olfactory receptor; Pseudogene; Sea snake; Serpent

Indexed keywords

ADAPTATION; GENE; MARINE ECOSYSTEM; OLFACTORY CUE; SNAKE; TERRESTRIAL ECOSYSTEM;

EID: 74349129193     PISSN: 1010061X     EISSN: 14209101     Source Type: Journal    
DOI: 10.1111/j.1420-9101.2009.01899.x     Document Type: Article
Times cited : (22)

References (40)
  • 1
    • 27644437576 scopus 로고    scopus 로고
    • Olfaction: Diverse species, conserved principles
    • Ache, B.W. Young, J.M. 2005. Olfaction: diverse species, conserved principles. Neuron 48 : 417 430.
    • (2005) Neuron , vol.48 , pp. 417-430
    • Ache, B.W.1    Young, J.M.2
  • 2
    • 33750802977 scopus 로고    scopus 로고
    • Ancient genomic architecture for mammalian olfactory receptor cluster
    • Aloni, R., Olender, T. Lancet, D. 2006. Ancient genomic architecture for mammalian olfactory receptor cluster. Genome Biol. 7 : R88.
    • (2006) Genome Biol. , vol.7 , pp. 88
    • Aloni, R.1    Olender, T.2    Lancet, D.3
  • 5
    • 0025825726 scopus 로고
    • A novel multigene family may encode odorant receptors: A molecular basis of odor recognition
    • Buck, L. Axel, R. 1991. A novel multigene family may encode odorant receptors: a molecular basis of odor recognition. Cell 65 : 175 187.
    • (1991) Cell , vol.65 , pp. 175-187
    • Buck, L.1    Axel, R.2
  • 6
    • 0001589303 scopus 로고    scopus 로고
    • Preliminary reconstructions of nasal chemosensory evolution in squamata
    • Cooper, W.E. Jr. 1996. Preliminary reconstructions of nasal chemosensory evolution in squamata. Amphib-reptil. 17 : 395 415.
    • (1996) Amphib-reptil. , vol.17 , pp. 395-415
    • Cooper Jr., W.E.1
  • 7
    • 0000461280 scopus 로고
    • Confidence limits on phylogenetics: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenetics: an approach using the bootstrap. Evolution 39 : 783 791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 8
    • 0035855833 scopus 로고    scopus 로고
    • How the olfactory system makes sense of scents
    • Firestein, S. 2001. How the olfactory system makes sense of scents. Nature 413 : 211 218.
    • (2001) Nature , vol.413 , pp. 211-218
    • Firestein, S.1
  • 10
    • 19344370697 scopus 로고    scopus 로고
    • Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates
    • Gilad, Y., Wiebe, V., Przeworski, M., Lancet, D. Pääbo, S. 2004. Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates. PLoS Biol. 2 : 120 125.
    • (2004) PLoS Biol. , vol.2 , pp. 120-125
    • Gilad, Y.1    Wiebe, V.2    Przeworski, M.3    Lancet, D.4    Pääbo, S.5
  • 11
    • 34250349648 scopus 로고    scopus 로고
    • Correction: Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates
    • Gilad, Y., Przeworski, M. Lancet, D. 2007. Correction: Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates. PLoS Biol. 5 : e148.
    • (2007) PLoS Biol. , vol.5 , pp. 148
    • Gilad, Y.1    Przeworski, M.2    Lancet, D.3
  • 12
    • 0033777499 scopus 로고    scopus 로고
    • The olfactory receptor gene superfamily: Data mining, classification, and nomenclature
    • Glusman, G., Bahar, A., Sharon, D., Pilpel, Y., White, J. Lancet, D. 2000. The olfactory receptor gene superfamily: data mining, classification, and nomenclature. Mamm. Genome 11 : 1016 1023.
    • (2000) Mamm. Genome , vol.11 , pp. 1016-1023
    • Glusman, G.1    Bahar, A.2    Sharon, D.3    Pilpel, Y.4    White, J.5    Lancet, D.6
  • 13
    • 0000365320 scopus 로고
    • Fitting the gene lineage into its species lineage, a parsimony strategy illustrated by cladograms constructed from globin sequences
    • Goodman, M., Gzelusniak, J., Moore, G.W., Romero-Herrera, A.E. Matsuda, G. 1979. Fitting the gene lineage into its species lineage, a parsimony strategy illustrated by cladograms constructed from globin sequences. Syst. Zool. 28 : 132 168.
    • (1979) Syst. Zool. , vol.28 , pp. 132-168
    • Goodman, M.1    Gzelusniak, J.2    Moore, G.W.3    Romero-Herrera, A.E.4    Matsuda, G.5
  • 14
    • 84872126893 scopus 로고    scopus 로고
    • University of California Press. Berkeley and Los Angeles.
    • Greene, H.W. 1997. Snakes. University of California Press, Berkeley and Los Angeles.
    • (1997) Snakes.
    • Greene, H.W.1
  • 15
    • 0023161087 scopus 로고
    • The organization and function of the vomeronasal system
    • Halpern, M. 1987. The organization and function of the vomeronasal system. Annu. Rev. Neurosci. 10 : 325 362.
    • (1987) Annu. Rev. Neurosci. , vol.10 , pp. 325-362
    • Halpern, M.1
  • 16
    • 0020639078 scopus 로고
    • Unusual evolutionary conservation and frequent DNA segment exchange in class i genes of the major histocompatibility complex
    • Hayashida, H. Miyata, T. 1983. Unusual evolutionary conservation and frequent DNA segment exchange in class I genes of the major histocompatibility complex. Proc. Natl Acad. Sci. USA 80 : 2671 2675.
    • (1983) Proc. Natl Acad. Sci. USA , vol.80 , pp. 2671-2675
    • Hayashida, H.1    Miyata, T.2
  • 17
    • 0026691182 scopus 로고
    • The rapid generation of mutation data matrices from protein sequences
    • Jones, D.T., Taylor, W.R. Thornton, J.M. 1992. The rapid generation of mutation data matrices from protein sequences. Comp. Appl. Biosci. 8 : 275 282.
    • (1992) Comp. Appl. Biosci. , vol.8 , pp. 275-282
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 18
    • 0037100671 scopus 로고    scopus 로고
    • MAFFT: A novel method for rapid multiple sequence alignment based on fast Fourier transform
    • Katoh, K., Misawa, K., Kuma, K. Miyata, T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30 : 3059 3066.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 3059-3066
    • Katoh, K.1    Misawa, K.2    Kuma, K.3    Miyata, T.4
  • 19
    • 48649093547 scopus 로고    scopus 로고
    • Pattern of the divergence of olfactory receptor genes during tetrapod evolution
    • Kishida, T. 2008. Pattern of the divergence of olfactory receptor genes during tetrapod evolution. PLoS ONE 3 : e2385.
    • (2008) PLoS ONE , vol.3 , pp. 2385
    • Kishida, T.1
  • 20
    • 35248826038 scopus 로고    scopus 로고
    • The olfactory receptor gene repertoires in secondary-adapted marine vertebrates: Evidence for reduction of the functional proportions in cetaceans
    • Kishida, T., Kubota, S., Shirayama, Y. Fukami, H. 2007. The olfactory receptor gene repertoires in secondary-adapted marine vertebrates: evidence for reduction of the functional proportions in cetaceans. Biol. Lett. 3 : 428 430.
    • (2007) Biol. Lett. , vol.3 , pp. 428-430
    • Kishida, T.1    Kubota, S.2    Shirayama, Y.3    Fukami, H.4
  • 22
    • 16244404745 scopus 로고    scopus 로고
    • Molecular evidence and marine snake origins
    • Lee, M.S.Y. 2005. Molecular evidence and marine snake origins. Biol. Lett. 1 : 227 230.
    • (2005) Biol. Lett. , vol.1 , pp. 227-230
    • Lee, M.S.Y.1
  • 23
    • 14644404946 scopus 로고    scopus 로고
    • Eggs-only diet: Its implications for the toxin profile changes and ecology of the marbled sea snake (Aipysurus eydouxii)
    • Li, M., Fry, B.G. Kini, R.M. 2005. Eggs-only diet: its implications for the toxin profile changes and ecology of the marbled sea snake (Aipysurus eydouxii). J. Mol. Evol. 60 : 81 89.
    • (2005) J. Mol. Evol. , vol.60 , pp. 81-89
    • Li, M.1    Fry, B.G.2    Kini, R.M.3
  • 26
    • 56549101000 scopus 로고    scopus 로고
    • The vestigial olfactory receptor subgenome of odontocete whales: Phylogenetic congruence between gene-tree reconciliation and supermatrix methods
    • McGowen, M.R., Clark, C. Gatesy, J. 2008. The vestigial olfactory receptor subgenome of odontocete whales: phylogenetic congruence between gene-tree reconciliation and supermatrix methods. Syst. Biol. 57 : 574 590.
    • (2008) Syst. Biol. , vol.57 , pp. 574-590
    • McGowen, M.R.1    Clark, C.2    Gatesy, J.3
  • 27
    • 56549111367 scopus 로고    scopus 로고
    • The evolution of animal chemosensory receptor gene repertoires: Roles of chance and necessity
    • Nei, M., Niimura, Y. Nozawa, M. 2008. The evolution of animal chemosensory receptor gene repertoires: roles of chance and necessity. Nat. Rev. Genet. 9 : 951 963.
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 951-963
    • Nei, M.1    Niimura, Y.2    Nozawa, M.3
  • 28
    • 17844373261 scopus 로고    scopus 로고
    • Evolutionary dynamics of olfactory receptor genes in fishes and tetrapods
    • Niimura, Y. Nei, M. 2005. Evolutionary dynamics of olfactory receptor genes in fishes and tetrapods. Proc. Natl Acad. Sci. USA 102 : 6039 6044.
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , pp. 6039-6044
    • Niimura, Y.1    Nei, M.2
  • 29
    • 33745463000 scopus 로고    scopus 로고
    • Evolutionary dynamics of olfactory and other chemosensory receptor genes in vertebrates
    • Niimura, Y. Nei, M. 2006. Evolutionary dynamics of olfactory and other chemosensory receptor genes in vertebrates. J. Hum. Genet. 51 : 505 517.
    • (2006) J. Hum. Genet. , vol.51 , pp. 505-517
    • Niimura, Y.1    Nei, M.2
  • 30
    • 40249098860 scopus 로고    scopus 로고
    • Extensive gain and losses of olfactory receptor genes in mammalian evolution
    • Niimura, Y. Nei, M. 2007. Extensive gain and losses of olfactory receptor genes in mammalian evolution. PLoS ONE 2 : e708.
    • (2007) PLoS ONE , vol.2 , pp. 708
    • Niimura, Y.1    Nei, M.2
  • 31
    • 14644389485 scopus 로고    scopus 로고
    • The olfactory receptor universe - From whole genome analysis to structure and evolution
    • Olender, T., Feldmesser, E., Atarot, T., Eisenstein, M. Lancet, D. 2004. The olfactory receptor universe - from whole genome analysis to structure and evolution. Genet. Mol. Res. 3 : 545 553.
    • (2004) Genet. Mol. Res. , vol.3 , pp. 545-553
    • Olender, T.1    Feldmesser, E.2    Atarot, T.3    Eisenstein, M.4    Lancet, D.5
  • 32
    • 0031110886 scopus 로고    scopus 로고
    • From gene to organismal phylogeny: Reconciled trees and the gene tree/species problem
    • Page, R.D. Charleston, M.A. 1997. From gene to organismal phylogeny: reconciled trees and the gene tree/species problem. Mol. Phylogenet. Evol. 7 : 231 240.
    • (1997) Mol. Phylogenet. Evol. , vol.7 , pp. 231-240
    • Page, R.D.1    Charleston, M.A.2
  • 33
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W.R. Lipman, D.J. 1988. Improved tools for biological sequence comparison. Proc. Natl Acad. Sci. USA 85 : 2444 2448.
    • (1988) Proc. Natl Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 34
    • 74349091004 scopus 로고    scopus 로고
    • Comparative anatomy and physiology of chemical senses in aquatic mammals
    • J.G.M. Thewissen. S. Nummela. eds. University of California Press. Berkeley.
    • Pihlström, H. 2008. Comparative anatomy and physiology of chemical senses in aquatic mammals. In : Sensory Evolution on the Threshold: Adaptations in Secondarily Aquatic Vertebrates (J.G.M. Thewissen S. Nummela, eds pp. 95 109. University of California Press, Berkeley.
    • (2008) Sensory Evolution on the Threshold: Adaptations in Secondarily Aquatic Vertebrates , pp. 95-109
    • Pihlström, H.1
  • 35
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 : 406 425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 36
    • 42049117353 scopus 로고    scopus 로고
    • Molecular phylogeny and divergence dates for Australasian elapids and sea snakes (hydrophiinae): Evidence from seven genes for rapid evolutionary radiations
    • Sanders, K.L., Lee, M.S.Y., Leys, R., Foster, R. Keogh, J.S. 2008. Molecular phylogeny and divergence dates for Australasian elapids and sea snakes (hydrophiinae): evidence from seven genes for rapid evolutionary radiations. J. Evol. Biol. 21 : 682 695.
    • (2008) J. Evol. Biol. , vol.21 , pp. 682-695
    • Sanders, K.L.1    Lee, M.S.Y.2    Leys, R.3    Foster, R.4    Keogh, J.S.5
  • 37
    • 0036695077 scopus 로고    scopus 로고
    • Reproductive isolating mechanisms between two sympatric sibling species of sea snakes
    • Shine, R., Reed, R.N., Shetty, S., Lemaster, M. Mason, R.T. 2002. Reproductive isolating mechanisms between two sympatric sibling species of sea snakes. Evolution 56 : 1655 1662.
    • (2002) Evolution , vol.56 , pp. 1655-1662
    • Shine, R.1    Reed, R.N.2    Shetty, S.3    Lemaster, M.4    Mason, R.T.5
  • 38
    • 51449094204 scopus 로고    scopus 로고
    • Avian olfactory receptor gene repertoires: Evidence for a well-developed sense of smell in birds?
    • Steiger, S.S., Fildler, A.E., Valcu, M. Kempenaers, B. 2008. Avian olfactory receptor gene repertoires: evidence for a well-developed sense of smell in birds? Proc. R. Soc. B 275 : 2309 2317.
    • (2008) Proc. R. Soc. B , vol.275 , pp. 2309-2317
    • Steiger, S.S.1    Fildler, A.E.2    Valcu, M.3    Kempenaers, B.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.