Characterization of novel thermostable dextranase from Thermotoga lettingae TMO

Applied Microbiology and Biotechnology

Volumn 85, Issue 3, 2010, Pages 581-587

  Kim, Young Min ^a   Kim, Doman ^a  

^a Chonnam National University   (South Korea)

Author keywords

GH family 66; Negative cooperative behavior; Thermophile; Thermostable dextranase; Thermotoga lettingae

Indexed keywords

BIOCHEMICAL PROPERTIES; CO-OPERATIVE BEHAVIORS; DEXTRANASE; HIGH TEMPERATURE; KINETIC FEATURES; MILLING PROCESS; OPTIMAL TEMPERATURE; RECOMBINANT PROTEIN;

DEXTRAN; ENZYMES; ESCHERICHIA COLI; GLUCOSE; METAL IONS; METAL REFINING; MILLING (MACHINING); SUGAR (SUCROSE);

ENZYME ACTIVITY;

64 KDA PROTEIN; DEXTRAN; DEXTRANASE; IRON; ISOMALTOSE; ISOMALTOTRIOSE; MALTOTRIOSE; RECOMBINANT PROTEIN; SILVER; UNCLASSIFIED DRUG;

BACTERIUM; BIOCHEMISTRY; ENZYME ACTIVITY; GENE; GENE EXPRESSION; GENETIC ANALYSIS; TEMPERATURE EFFECT;

ARTICLE; BACTERIAL GENE; ENZYME ACTIVITY; ENZYME ANALYSIS; ESCHERICHIA COLI; INCUBATION TEMPERATURE; INCUBATION TIME; KINETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PROTEIN CLEAVAGE; PROTEIN EXPRESSION; PROTEIN FOLDING; PROTEIN PURIFICATION; THERMOTOGA; THERMOTOGA LETTINGAE;

AMINO ACID SEQUENCE; BACTERIA; BACTERIAL PROTEINS; DEXTRANASE; DEXTRANS; ENZYME INHIBITORS; ENZYME STABILITY; ESCHERICHIA COLI; GENE EXPRESSION; GLUCANS; HYDROGEN-ION CONCENTRATION; IRON; ISOMALTOSE; KINETICS; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT; SILVER; SUBSTRATE SPECIFICITY; TEMPERATURE; TIME FACTORS; TRISACCHARIDES;

ESCHERICHIA COLI; THERMOTOGA LETTINGAE;

EID: 74149093360     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-009-2121-6     Document Type: Article

References (29)

1. SG Altschul TL Madden AA Schaffer J Zhang Z Shang W Miller DJ Lipman 1997 Gapped BLAST and PSI-BLSAT: a new generation of protein database search programs Nucleic Acids Res 25 3389 3402 10.1093/nar/25.17.3389 1:CAS:528:DyaK2sXlvFyhu7w%3D (Pubitemid 27359211)
2. H Aoki Y Sakano 1997 A classification of dextran-hydrolysing enzymes based on amino-acid-sequence similarities Biochem J 323 859 861 1:CAS:528:DyaK2sXjtFKjuro%3D
3. WN Arnold TB Nguyen LC Mann 1998 Purification and characterization of a dextranase from Sporothrix schenckii Arch Microbiol 170 91 98 10.1007/s002030050619 1:CAS:528:DyaK1cXls1Sgs70%3D (Pubitemid 28366026)
4. M Balk J Weijma AJM Stams 2002 Thermotoga lettingae sp. nov., a novel thermophilic, methanol-degrading bacterium isolated from a thermophilic anaerobic reaction Int J Syst Evol Microbiol 52 1361 1368 10.1099/ijs.0.02165-0 1:CAS:528:DC%2BD38Xmt1Grs70%3D (Pubitemid 34851237)
5. JD Bendtsen H Nielsen G von Heijne S Brunak 2004 Improved prediction of signal peptides: SignalP 3.0 J Mol Biol 340 783 795 10.1016/j.jmb.2004.05.028 (Pubitemid 38829638)
6. M Bounias 1980 N-(1-Naphthyl)ethylenediamine dihydrochloride as a new reagent for nanomole quantification of sugars on thin-layer plates by a mathematical calibration process Anal Biochem 106 291 295 10.1016/0003-2697(80) 90523-0 1:CAS:528:DyaL3cXls1eksbk%3D
7. MM Bradford 1976 Rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding Anal Biochem 72 248 254 10.1016/0003-2697(76)90527-3 1:CAS:528: DyaE28XksVehtrY%3D
8. HTS Britton RA Robinson 1931 Universal buffer solutions and the dissociation constant of Veronal J Chem Soc 1 1456 1462 10.1039/jr9310001456
9. BL Cantarel PM Coutinho C Rancurel T Bernard V Lombard B Henrissat 2009 The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics Nucleic Acids Res 37 D233 D238 10.1093/nar/gkn663 1:CAS:528:DC%2BD1cXhsFejtL7K
10. PM Finnegan SM Brumbley MGO Shea KMH Nevalainen PL Bergquist 2004 Paenibacillus isolates possess diverse dextran-degrading enzymes J Appl Microbiol 97 477 485 10.1111/j.1365-2672.2004.02325.x 1:CAS:528: DC%2BD2cXoslGktLk%3D (Pubitemid 39208188)
11. PM Finnegan SM Brumbley MGO Shea KMH Nevalainen PL Bergquist 2004 Isolation and characterization of genes encoding thermoactive and thermostable dextranases from two thermotolerant soil bacteria Curr Microbiol 49 327 333 10.1007/s00284-004-4308-5 1:CAS:528:DC%2BD2cXos1Gju7g%3D (Pubitemid 39506490)
12. PM Finnegan SM Brumbley MGO Shea KMH Nevalainen PL Bergquist 2005 Diverse dextranase genes from Paenibacillus species Arch Microbiol 183 140 147 10.1007/s00203-004-0756-3 1:CAS:528:DC%2BD2MXptlejtA%3D%3D (Pubitemid 40248278)
13. E Hild SM Brumbley MG O'Shea H Nevalainen QL Bergquist 2007 A Paenibacillus sp. dextranase mutant pool with improved thermostability and activity Appl Microbiol Biotechnol 75 1071 1078 10.1007/s00253-007-0936-6 1:CAS:528:DC%2BD2sXmsVKqtb8%3D (Pubitemid 46944551)
14. F Hoster R Daniel G Gottschalk 2001 Isolation of a new Thermoanaerobacterium thermosaccharolyticum strain (FH1) producing a thermostable dextranase J Gen Appl Microbiol 47 187 192 10.2323/jgam.47.187 1:CAS:528:DC%2BD3MXos1Oktbw%3D
15. T Igarashi A Yamamoto N Goto 1995 Characterization of the dextranase gene (dex) of Streptococcus mutans and its recombinant product in an Escherichia coli host Microbiol Immunol 39 387 391 1:CAS:528:DyaK2MXmvVOru78%3D
16. T Igarashi A Yamamoto N Goto 1995 Sequence analysis of the Streptococcus mutans Ingbritt dex a gene encoding extra cellular dextranase Microbiol Immunol 39 853 860 1:CAS:528:DyaK2MXpvFSgs7k%3D
17. T Igarashi A Yamamoto N Goto 2000 Nucleotide sequence and molecular characterization of a dextranase gene from Streptococcus doweni Microbiol Immunol 45 341 348
18. T Igarashi H Morisaki N Goto 2004 Molecular characterization of dextranase from Streptococcus rattus Microbiol Immunol 48 155 162 1:CAS:528:DC%2BD2cXjtlOjtbo%3D
19. E Khalikova P Susi T Korpela 2005 Microbial dextran-hydrolyzing enzymes: fundamentals and applications Microbiol Mol Biol Rev 69 306 325 10.1128/MMBR.69.2.306-325.2005 1:CAS:528:DC%2BD2MXmtFartr0%3D (Pubitemid 40847942)
20. P Lawman AS Bleiweis 1991 Molecular cloning of the extracellular endodextranase of Streptococcus salivarius J Bacteriol 173 7423 7428 1:CAS:528:DyaK38XnslCgsQ%3D%3D
21. JH Lee GH Kim SH Kim DL Cho DW Kim DF Day D Kim 2006 Treatment with glucanhydrolase from Lipomyces starkeyi for removal of soluble polysaccharides in sugar processing J Microbiol Biotechnol 16 983 987 1:CAS:528: DC%2BD28XnslOht74%3D
22. RF McFeeter 1980 A manual method for reducing sugar determinations with 2,2′-bicinchoninate reagent Anal Biochem 103 302 306 10.1016/0003-2697(80) 90614-4
23. H Nakai M Kanehisa 1991 Expert system for predicting protein localization sites in gram-negative bacteria Proteins 11 95 110 10.1002/prot.340110203 1:CAS:528:DyaK38XhtVaitLg%3D
24. H Nielsen J Engelbrecht S Brunak G Von Heijine 1997 Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites Protein Eng 10 1 6 10.1093/protein/10.1.1 1:CAS:528:DyaK2sXhsVersrs%3D
25. T Oguma T Kurokawa K Tobe M Kobayashi 1995 Cloning and sequence analysis of the cycloisomaltooligosaccharide glucanotransferase gene from Bacillus circulans T-3040 and expression in Escherichia coli cells J Appl Glycosci 42 415 419 1:CAS:528:DyaK28XptFKqsg%3D%3D
26. J Wongchawalit T Yamamoto H Nakai YM Kim N Sato M Nishimoto M Okuyama H Mori O Saji C Chanchao S Wongsiri R Surarit J Svasti S Chiba A Kimura 2006 Purification and characterization of α-glucosidase I from Japanese honeybee (Apis cerana japonica) and molecular cloning of its cDNA Biosci Biotechnol Biochem 70 2889 2898 10.1271/bbb.60302 1:CAS:528: DC%2BD2sXktVGkuw%3D%3D (Pubitemid 46021546)
27. CVA Wynter CF Galea LM Cox MW Dawson BK Patel PA Inkerman S Hamilton 1995 Thermostable dextranases: screening, detection and preliminary characterization J Appl Bacteriol 79 203 212 1:CAS:528:DyaK2MXosVSntbs%3D
28. CVA Wynter M Chan J De Jersey B Patel PA Inkerman S Hamilton 1997 Isolation and characterization of a thermostable dextranase Enzyme Microb Technol 20 242 247 10.1016/S0141-0229(96)00118-4 (Pubitemid 27144096)
29. T Yamamoto K Terasawa YM Kim A Kimura Y Kitamura M Kobayashi K Funane 2006 Identification of catalytic amino acids of cyclodextran glucanotransferase from Bacillus circulans T-3040 Biosci Biotechnol Biochem 70 147 1953