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Volumn 65, Issue 1, 2007, Pages 3-21

Doing thousands of hypothesis tests at the same time

Author keywords

Empirical Bayes; False discovery rate; Local fdr; Locfdr; Microarray; Power; Two groups model

Indexed keywords


EID: 74049163430     PISSN: 00261424     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (13)

References (26)
  • 2
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y. and Hochberg, Y. (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing, Journal of the Royal Statistical Society, Ser. B, 57, 289-300.
    • (1995) Journal of the Royal Statistical Society, Ser. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 3
    • 0035733108 scopus 로고    scopus 로고
    • The control of the false discovery rate under dependency
    • Benjamini, Y. and Yekutieli, D. (2001) The control of the false discovery rate under dependency, Ann. Stat., 29, 1165-88.
    • (2001) Ann. Stat , vol.29 , pp. 1165-1188
    • Benjamini, Y.1    Yekutieli, D.2
  • 4
    • 25444452877 scopus 로고    scopus 로고
    • A comparative review of estimates of the proportion unchanged genes and the false discovery rate
    • Broberg, P. (2005) A comparative review of estimates of the proportion unchanged genes and the false discovery rate, BMC Bioinformatics, 6, 199.
    • (2005) BMC Bioinformatics , vol.6 , pp. 199
    • Broberg, P.1
  • 5
    • 0043203327 scopus 로고    scopus 로고
    • Multiple hypothesis testing in microarray exper- iments
    • Dudoit, S., Shaffer, J., and Boldrick, J. (2003) Multiple hypothesis testing in microarray exper- iments, Statistical Science, 18, 71-103.
    • (2003) Statistical Science , vol.18 , pp. 71-103
    • Dudoit, S.1    Shaffer, J.2    Boldrick, J.3
  • 6
    • 0030335219 scopus 로고    scopus 로고
    • Using specially designed exponential families for density estimation
    • Efron, B. and Tibshirani, R. (1996) Using specially designed exponential families for density estimation, Annals Stat., 24, 2431-61.
    • (1996) Annals Stat , vol.24 , pp. 2431-2461
    • Efron, B.1    Tibshirani, R.2
  • 8
    • 0035992248 scopus 로고    scopus 로고
    • Empirical Bayes methods and false discovery rates for mi- croarrays
    • Efron, B. and Tibshirani, R. (2002) Empirical Bayes methods and false discovery rates for mi- croarrays, Genetic Epidemiology, 23, 70-86.
    • (2002) Genetic Epidemiology , vol.23 , pp. 70-86
    • Efron, B.1    Tibshirani, R.2
  • 9
    • 2142732441 scopus 로고    scopus 로고
    • Large-scale simultaneous hypothesis testing: The choice of a null hypothesis
    • Efron, B. (2004) Large-scale simultaneous hypothesis testing: the choice of a null hypothesis, JASA, 99, 96-104.
    • (2004) JASA , vol.99 , pp. 96-104
    • Efron, B.1
  • 11
    • 84891393675 scopus 로고    scopus 로고
    • Size, power, and false discovery rates
    • to appear
    • Efron, B. (2006a) Size, power, and false discovery rates, to appear, Annals of Statistics, http://www-stat.stanford.edu/~brad/papers/Size.pdf
    • (2006) Annals of Statistics
    • Efron, B.1
  • 12
    • 84891438983 scopus 로고    scopus 로고
    • Microarrays, empirical Bayes, and the two-groups model
    • To appear
    • Efron, B. (2006b) Microarrays, empirical Bayes, and the two-groups model, (To appear Statistical Science).
    • (2006) Statistical Science
    • Efron, B.1
  • 13
    • 33947216221 scopus 로고    scopus 로고
    • Correlation and large-scale simultaneous significance testing
    • Efron, B. (2007) Correlation and large-scale simultaneous significance testing, Jour. Amer. Stat. Assoc., 102, 93-103.
    • (2007) Jour. Amer. Stat. Assoc , vol.102 , pp. 93-103
    • Efron, B.1
  • 15
    • 25144456446 scopus 로고    scopus 로고
    • Estimating the proportion of true null hypotheses, with application to DNA microarray data
    • Langass, M., Lindquist, B., and Ferkingstad, E. (2005) Estimating the proportion of true null hypotheses, with application to DNA microarray data, JRSS-B, 67, 555-72.
    • (2005) JRSS-B , vol.67 , pp. 555-572
    • Langass, M.1    Lindquist, B.2    Ferkingstad, E.3
  • 16
    • 0034730124 scopus 로고    scopus 로고
    • Importance of replication in mi- croarray gene expression studies: Statistical methods and evidence from repetitive cDNA hybridizations
    • Lee, M.L.T., Kuo, F., Whitmore, G., and Sklar, J. (2000) Importance of replication in mi- croarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridizations, Proc. Nat. Acad. Sci., 97, 9834-38.
    • (2000) Proc. Nat. Acad. Sci , vol.97 , pp. 9834-9838
    • Lee, M.L.T.1    Kuo, F.2    Whitmore, G.3    Sklar, J.4
  • 17
    • 23744439164 scopus 로고    scopus 로고
    • Generalizations of the familywise error rate
    • Lehmann, E. and Romano, J. (2005) Generalizations of the Familywise Error Rate, Annals Stat., 33, 1138-1154.
    • (2005) Annals Stat , vol.33 , pp. 1138-1154
    • Lehmann, E.1    Romano, J.2
  • 18
    • 8844258766 scopus 로고    scopus 로고
    • A mixture model for estimating the local false discovery rate in DNA microarray analysis
    • Liao, J., Lin, Y., Selvanayagam, Z., and Weichung, J. (2004) A mixture model for estimating the local false discovery rate in DNA microarray analysis, Bioinformatics, 20, 2694-2701.
    • (2004) Bioinformatics , vol.20 , pp. 2694-2701
    • Liao, J.1    Lin, Y.2    Selvanayagam, Z.3    Weichung, J.4
  • 20
    • 0034923013 scopus 로고    scopus 로고
    • On differential variability of expression ratios: Improving statistical inference about gene expression changes from microarray data
    • Newton, M., Kendziorski, C., Richmond, C., Blattner, F., and Tsui, K. (2001) On differential variability of expression ratios: improving statistical inference about gene expression changes from microarray data, Jour. Comp. Biology, 8, 37-52.
    • (2001) Jour. Comp. Biology , vol.8 , pp. 37-52
    • Newton, M.1    Kendziorski, C.2    Richmond, C.3    Blattner, F.4    Tsui, K.5
  • 21
    • 2142854576 scopus 로고    scopus 로고
    • A mixture model approach to detecting differentially expressed genes with microarray data
    • Pan, W., Lin, J., and Le, C. (2003) A mixture model approach to detecting differentially expressed genes with microarray data, Functional & Integrative Genomics, 3, 117-24.
    • (2003) Functional & Integrative Genomics , vol.3 , pp. 117-124
    • Pan, W.1    Lin, J.2    Le, C.3
  • 22
    • 27544510142 scopus 로고    scopus 로고
    • Bias in the estimation of false discovery rate in microarray studies
    • Pawitan, Y., Murthy, K., Michiels, S., and Ploner, A. (2005) Bias in the estimation of false discovery rate in microarray studies, Bioinformatics, 21, 3865-72.
    • (2005) Bioinformatics , vol.21 , pp. 3865-3872
    • Pawitan, Y.1    Murthy, K.2    Michiels, S.3    Ploner, A.4
  • 23
    • 0038156106 scopus 로고    scopus 로고
    • Estimating the occurrence of false positions and false negatives in microarray studies by approximating and partitioning the empirical distribution of the p-values
    • Pounds, S. and Morris, S. (2003) Estimating the occurrence of false positions and false negatives in microarray studies by approximating and partitioning the empirical distribution of the p-values, Bioinformatics, 19, 1236-42.
    • (2003) Bioinformatics , vol.19 , pp. 1236-1242
    • Pounds, S.1    Morris, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.