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Volumn 391, Issue 3, 2010, Pages 1409-1414

The potential of the cruciform structure formation as an important factor influencing p53 sequence-specific binding to natural DNA targets

Author keywords

DNA binding; p53 protein; Protein DNA complex

Indexed keywords

DNA; GROWTH ARREST AND DNA DAMAGE INDUCIBLE PROTEIN 45; P21 ACTIVATED KINASE; PROTEIN MDM2; PROTEIN P53;

EID: 73949090549     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2009.12.076     Document Type: Article
Times cited : (28)

References (36)
  • 1
    • 33846910507 scopus 로고    scopus 로고
    • p53 induced growth arrest versus apoptosis and its modulation by survival cytokines
    • Liebermann D.A., Hoffman B., and Vesely D. p53 induced growth arrest versus apoptosis and its modulation by survival cytokines. Cell Cycle 6 (2007) 166-170
    • (2007) Cell Cycle , vol.6 , pp. 166-170
    • Liebermann, D.A.1    Hoffman, B.2    Vesely, D.3
  • 2
    • 38049054248 scopus 로고    scopus 로고
    • Updates on p53: modulation of p53 degradation as a therapeutic approach
    • Dey A., Verma C.S., and Lane D.P. Updates on p53: modulation of p53 degradation as a therapeutic approach. Br. J. Cancer 98 (2008) 4-8
    • (2008) Br. J. Cancer , vol.98 , pp. 4-8
    • Dey, A.1    Verma, C.S.2    Lane, D.P.3
  • 3
    • 0037038699 scopus 로고    scopus 로고
    • Groups of p53 target genes involved in specific p53 downstream effects cluster into different classes of DNA binding sites
    • Qian H., Wang T., Naumovski L., Lopez C.D., and Brachmann R.K. Groups of p53 target genes involved in specific p53 downstream effects cluster into different classes of DNA binding sites. Oncogene 21 (2002) 7901-7911
    • (2002) Oncogene , vol.21 , pp. 7901-7911
    • Qian, H.1    Wang, T.2    Naumovski, L.3    Lopez, C.D.4    Brachmann, R.K.5
  • 5
    • 0035937782 scopus 로고    scopus 로고
    • Analysis of the binding of p53 to DNAs containing mismatched and bulged bases
    • Degtyareva N., Subramanian D., and Griffith J.D. Analysis of the binding of p53 to DNAs containing mismatched and bulged bases. J. Biol. Chem. 276 (2001) 8778-8784
    • (2001) J. Biol. Chem. , vol.276 , pp. 8778-8784
    • Degtyareva, N.1    Subramanian, D.2    Griffith, J.D.3
  • 6
    • 0036784608 scopus 로고    scopus 로고
    • Efficient specific DNA binding by p53 requires both its central and C-terminal domains as revealed by studies with high-mobility group 1 protein
    • McKinney K., and Prives C. Efficient specific DNA binding by p53 requires both its central and C-terminal domains as revealed by studies with high-mobility group 1 protein. Mol. Cell. Biol. 22 (2002) 6797-6808
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 6797-6808
    • McKinney, K.1    Prives, C.2
  • 7
    • 0042763553 scopus 로고    scopus 로고
    • The complex interactions of p53 with target DNA: we learn as we go
    • Kim E., and Deppert W. The complex interactions of p53 with target DNA: we learn as we go. Biochem. Cell Biol. 81 (2003) 141-150
    • (2003) Biochem. Cell Biol. , vol.81 , pp. 141-150
    • Kim, E.1    Deppert, W.2
  • 8
    • 2642553083 scopus 로고    scopus 로고
    • High-affinity binding of tumor-suppressor protein p53 and HMGB1 to hemicatenated DNA loops
    • Stros M., Muselikova-Polanska E., Pospisilova S., and Strauss F. High-affinity binding of tumor-suppressor protein p53 and HMGB1 to hemicatenated DNA loops. Biochemistry 43 (2004) 7215-7225
    • (2004) Biochemistry , vol.43 , pp. 7215-7225
    • Stros, M.1    Muselikova-Polanska, E.2    Pospisilova, S.3    Strauss, F.4
  • 9
    • 14044253551 scopus 로고    scopus 로고
    • Modulation of p53 binding to Holliday junctions and 3-cytosine bulges by phosphorylation events
    • Subramanian D., and Griffith J.D. Modulation of p53 binding to Holliday junctions and 3-cytosine bulges by phosphorylation events. Biochemistry 44 (2005) 2536-2544
    • (2005) Biochemistry , vol.44 , pp. 2536-2544
    • Subramanian, D.1    Griffith, J.D.2
  • 10
    • 0037023763 scopus 로고    scopus 로고
    • P53 binds telomeric single strand overhangs and t-loop junctions in vitro
    • Stansel R.M., Subramanian D., and Griffith J.D. P53 binds telomeric single strand overhangs and t-loop junctions in vitro. J. Biol. Chem. 277 (2002) 11625-11628
    • (2002) J. Biol. Chem. , vol.277 , pp. 11625-11628
    • Stansel, R.M.1    Subramanian, D.2    Griffith, J.D.3
  • 13
    • 0343775742 scopus 로고    scopus 로고
    • Specific modulation of p53 binding to consensus sequence within supercoiled DNA by monoclonal antibodies
    • Brazda V., Palecek J., Pospisilova S., Vojtesek B., and Palecek E. Specific modulation of p53 binding to consensus sequence within supercoiled DNA by monoclonal antibodies. Biochem. Biophys. Res. Commun. 267 (2000) 934-939
    • (2000) Biochem. Biophys. Res. Commun. , vol.267 , pp. 934-939
    • Brazda, V.1    Palecek, J.2    Pospisilova, S.3    Vojtesek, B.4    Palecek, E.5
  • 14
    • 67649097395 scopus 로고    scopus 로고
    • The cruciform DNA mobility shift assay: a tool to study proteins that recognize bent DNA
    • Stefanovsky V.Y., and Moss T. The cruciform DNA mobility shift assay: a tool to study proteins that recognize bent DNA. Methods Mol. Biol. 543 (2009) 537-546
    • (2009) Methods Mol. Biol. , vol.543 , pp. 537-546
    • Stefanovsky, V.Y.1    Moss, T.2
  • 15
    • 34547136691 scopus 로고    scopus 로고
    • Interactions of human rad54 protein with branched DNA molecules
    • Mazina O.M., Rossi M.J., Thomaa N.H., and Mazin A.V. Interactions of human rad54 protein with branched DNA molecules. J. Biol. Chem. 282 (2007) 21068-21080
    • (2007) J. Biol. Chem. , vol.282 , pp. 21068-21080
    • Mazina, O.M.1    Rossi, M.J.2    Thomaa, N.H.3    Mazin, A.V.4
  • 17
    • 27644450261 scopus 로고    scopus 로고
    • DNA transitions induced by binding of PARP-1 to cruciform structures in supercoiled plasmids
    • Chasovskikh S., Dimtchev A., Smulson M., and Dritschilo A. DNA transitions induced by binding of PARP-1 to cruciform structures in supercoiled plasmids. Cytometry A 68 (2005) 21-27
    • (2005) Cytometry A , vol.68 , pp. 21-27
    • Chasovskikh, S.1    Dimtchev, A.2    Smulson, M.3    Dritschilo, A.4
  • 18
    • 52049119340 scopus 로고    scopus 로고
    • Mus81-dependent double-strand DNA breaks at in vivo-generated cruciform structures in S. cerevisiae
    • Cote A.G., and Lewis S.M. Mus81-dependent double-strand DNA breaks at in vivo-generated cruciform structures in S. cerevisiae. Mol. Cell. 31 (2008) 800-812
    • (2008) Mol. Cell. , vol.31 , pp. 800-812
    • Cote, A.G.1    Lewis, S.M.2
  • 20
    • 0030768181 scopus 로고    scopus 로고
    • DNA-conformation is an important determinant of sequence-specific DNA binding by tumor suppressor p53
    • Kim E., Albrechtsen N., and Deppert W. DNA-conformation is an important determinant of sequence-specific DNA binding by tumor suppressor p53. Oncogene 15 (1997) 857-869
    • (1997) Oncogene , vol.15 , pp. 857-869
    • Kim, E.1    Albrechtsen, N.2    Deppert, W.3
  • 21
    • 43549097098 scopus 로고    scopus 로고
    • DNA topology influences p53 sequence-specific DNA binding through structural transitions within the target sites
    • Jagelska E.B., Brazda V., Pecinka P., Palecek E., and Fojta M. DNA topology influences p53 sequence-specific DNA binding through structural transitions within the target sites. Biochem. J. 412 (2008) 57-63
    • (2008) Biochem. J. , vol.412 , pp. 57-63
    • Jagelska, E.B.1    Brazda, V.2    Pecinka, P.3    Palecek, E.4    Fojta, M.5
  • 24
    • 0020479168 scopus 로고
    • Relationship between superhelical density and cruciform formation in plasmid pVH51
    • Singleton C.K., and Wells R.D. Relationship between superhelical density and cruciform formation in plasmid pVH51. J. Biol. Chem. 257 (1982) 6292-6295
    • (1982) J. Biol. Chem. , vol.257 , pp. 6292-6295
    • Singleton, C.K.1    Wells, R.D.2
  • 25
  • 26
    • 4944241898 scopus 로고    scopus 로고
    • Investigations of the supercoil-selective DNA binding of wild type p53 suggest a novel mechanism for controlling p53 function
    • Fojta M., Pivonkova H., Brazdova M., Nemcova K., Palecek J., and Vojtesek B. Investigations of the supercoil-selective DNA binding of wild type p53 suggest a novel mechanism for controlling p53 function. Eur. J. Biochem. 271 (2004) 3865-3876
    • (2004) Eur. J. Biochem. , vol.271 , pp. 3865-3876
    • Fojta, M.1    Pivonkova, H.2    Brazdova, M.3    Nemcova, K.4    Palecek, J.5    Vojtesek, B.6
  • 27
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: the European Molecular Biology Open Software Suite
    • Rice P., Longden I., and Bleasby A. EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet. 16 (2000) 276-277
    • (2000) Trends Genet. , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 28
    • 0026015258 scopus 로고
    • Mechanism of DNA A protein-dependent pBR322 DNA replication. DNA A protein-mediated trans-strand loading of the DNA B protein at the origin of pBR322 DNA
    • Parada C.A., and Marians K.J. Mechanism of DNA A protein-dependent pBR322 DNA replication. DNA A protein-mediated trans-strand loading of the DNA B protein at the origin of pBR322 DNA. J. Biol. Chem. 266 (1991) 18895-18906
    • (1991) J. Biol. Chem. , vol.266 , pp. 18895-18906
    • Parada, C.A.1    Marians, K.J.2
  • 30
    • 0028140665 scopus 로고
    • Unusual DNA structures, chromatin and transcription
    • van Holde K., and Zlatanova J. Unusual DNA structures, chromatin and transcription. Bioessays 16 (1994) 59-68
    • (1994) Bioessays , vol.16 , pp. 59-68
    • van Holde, K.1    Zlatanova, J.2
  • 32
  • 33
    • 0037174933 scopus 로고    scopus 로고
    • Specific interaction of p53 with target binding sites is determined by DNA conformation and is regulated by the C-terminal domain
    • Gohler T., Reimann M., Cherny D., Walter K., Warnecke G., Kim E., and Deppert W. Specific interaction of p53 with target binding sites is determined by DNA conformation and is regulated by the C-terminal domain. J. Biol. Chem. 277 (2002) 41192-41203
    • (2002) J. Biol. Chem. , vol.277 , pp. 41192-41203
    • Gohler, T.1    Reimann, M.2    Cherny, D.3    Walter, K.4    Warnecke, G.5    Kim, E.6    Deppert, W.7
  • 34
    • 33749395513 scopus 로고    scopus 로고
    • DNA modification with cisplatin affects sequence-specific DNA binding of p53 and p73 proteins in a target site-dependent manner
    • Pivonkova H., Pecinka P., Ceskova P., and Fojta M. DNA modification with cisplatin affects sequence-specific DNA binding of p53 and p73 proteins in a target site-dependent manner. FEBS J. 273 (2006) 4693-4706
    • (2006) FEBS J. , vol.273 , pp. 4693-4706
    • Pivonkova, H.1    Pecinka, P.2    Ceskova, P.3    Fojta, M.4
  • 35
    • 0030951978 scopus 로고    scopus 로고
    • DNA bending is essential for the site-specific recognition of DNA response elements by the DNA binding domain of the tumor suppressor protein p53
    • Nagaich A.K., Appella E., and Harrington R.E. DNA bending is essential for the site-specific recognition of DNA response elements by the DNA binding domain of the tumor suppressor protein p53. J. Biol. Chem. 272 (1997) 14842-14849
    • (1997) J. Biol. Chem. , vol.272 , pp. 14842-14849
    • Nagaich, A.K.1    Appella, E.2    Harrington, R.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.