Enhanced polyhydroxyalkanoate production by Paracoccus pantotrophus from glucose and mixed substrate

Fresenius Environmental Bulletin

Volumn 18, Issue 11, 2009, Pages 2013-2022

  Üçişik Akkaya, Esma ^a   Ercan, Onur ^a   Yeşiladali, S Koray ^a   Öztürk, Tank ^a   Ubay Çokgör, Emine ^a   Orhon, Derin ^a,b   Tamerler, Candan ^a   Çakar, Z Petek ^a  

^a ISTANBUL TECHNICAL UNIVERSITY   (Turkey)

^b Turkish Academy of Sciences   (Turkey)

Author keywords

Glucose; Mixed substrate; Oxygen limitation; Paracoccus pantotrophus; Poly hydroxybutyrate (PHB); Substrate storage

Indexed keywords

BACTERIUM; ESTER; EXPERIMENTAL STUDY; GLUCOSE; GROWTH RATE; METABOLISM; MICROBIAL ACTIVITY; ORGANIC CARBON; OXYGEN; PROTEIN; SUBSTRATE;

PARACOCCUS PANTOTROPHUS;

EID: 73649125278     PISSN: 10184619     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (57)

1. Robertson, L. A. and Kuenen, J. G. (1983) Thiosphaera pan-totropha gen. nov. sp. nov., a facultatively anaerobic, facultative autotrophic sulphur bacterium. J Gen Microbiol 129, 2847-2855.
2. Gupta, A.B. (1997) Thiosphaera pantotropha: a sulfur bacterium capable of simultaneous heterotrophic nitrification and aerobic denitrification. Enzyme Microb Technol 21, 589-595.
3. Ellington, M. J. K., Sawers, G., Sears, H. J., Spiro, S., Richardson, D. J. and Ferguson, S. J. (2003) Characterization of the expression and activity of the periplasmic nitrate reductase of Paracoccus pantotrophus in chemostat cultures. Microbiol 149, 1533-1540.
4. Zajicek, R. S. and Ferguson, S. J. (2005) The enigma of Paracoccus pantotrophus cytochrome cd(1) activation. Biochem Soc Transact 33, 147-148.
5. Ellington, M. J. K., Bhakoo, K.K., Sawers, G., Richardson, D. J. and Ferguson, S. J. (2002) Hierarchy of carbon source selection in Paracoccus pantotrophus: strict correlation between reduction state of the carbon substrate and aerobic expression of the nap operon. J Bacteriol 184, 4767-4774.
6. Otani, Y., Hasegawa, K. and Hanaki, K. (2004) Comparison of aerobic denitrifying activity among three cultural species with various carbon sources. Water Sci Technol 50, 15-22.
7. van Niel, E. W. J., Robertson, L. A. and Kuenen, J. G. (1995) Rapid short-term poly-β-hydroxybutyrate production by Thiosphaera pantotropha in the presence of excess acetate. Enzyme Microb Technol 17, 977-982.
8. van Aalst-van Leeuwen, M. A., Pot, M. A., van Loosdrecht, M. C. M. and Heijnen, J. J. (1997) Kinetic modeling of poly(β-hydroxybutyrate) production and consumption by Paracoccus pantotrophus under dynamic substrate supply. Biotechnol Bioeng 55, 773-782.
9. Bormann, E. J., Leissner, M. and Beer, B. (1998) Growth-associated production of poly(hydroxybutyric acid) by Azotobacter beijerinckii from organic nitrogen substrates. Appl Microbiol Biotechnol 49, 84-88.
10. Bormann, E. J., Leissner, M., Roth, M., Beer, B. and Metzner, K. (1998) Production of polyhydroxybutyrate by Ralstonia eutropha from protein hydrolysates. Appl Microbiol Biotechnol 50, 604-607.
11. Bormann, E. J. and Rom, M. (1999) The production of polyhydroxybutyrate by Methylobacterium rhodesianum and Ralstonia eutropha in media containing glycerol and casein hydrolysates. Biotechnol Lett 21, 1059-1063.
12. Wentzel, M.C., Ekama, G.A. and Marais, G.V.R. (1990) Kinetics of nitrification denitrification biological excess phosphorus removal systems. Water Sci Technol 17, 57-71.
13. Henze, M., Gujer, W., Mino, T., Matsuo, T., Wentzel, M.C. and Marais, C.V.R. (1995) Activated sludge model No. 2., IAWQ scientific and technical report No.3, London, UK.
14. Henze, M, Gujer, W., Mino, T., Matsuo, T., Wentzel, M.C, Marais, C.V.R and van Loosdrecht, M.C.M. (1999) Activated sludge model No.2d, ASM2d. Water Sci Technol 39, 165-183.
15. Filipe, C.D.M., Daigger, G.T. and Grady, C.P.L. Jr. (2001) Stoichiometry and kinetics of acetate uptake under anaerobic conditions by an enriched culture of phosphorus accumulating organisms at different pHs. Biotechnol Bioeng 76, 32-43.
16. Yagci, N., Insel, G., Tasli, R., Artan, N., Randall, C.W. and Orhon, D. (2006) A new interpretation of ASM2d for modeling of SBR performance for enhanced biological phosphorus removal under different P/HAc ratios. Biotechnol Bioeng 93, 258-270.
17. Van Loosdrecht, M.C.M., Pot, M.A. and Heijnen, J.J. (1997) Importance of bacterial storage polymers in bioprocesses. Water Sci Technol 35, 41-47.
18. Dionisi, D., Majone, M., Ramadori, R. and Beccari, M. (2001) The storage of acetate under anoxic conditions. Water Res 35, 2661-2668.
19. Ciggin, A., Karahan, O. and Orhon, D. (2007) Effect of feeding pattern on biochemical storage by activated sludge under anoxic conditions. Water Res 41, 924-934.
20. Karahan, O., van Loosdrecht, M.C.M. and Orhon, D. (2006). Modeling the utilization of starch by activated sludge for simultaneous substrate storage and microbial growth. Biotechnol Bioeng 94, 43-53.
21. Insel, G., Celikyilmaz, G., Akkaya, E.U., Yesiladali, K., Cakar, Z.P., Tamerler, C. and Orhon, D. (2007) Respirometric evaluation and modeling of glucose utilization by Escherichia coli under aerobic and mesophilic cultivation conditions. Biotechnol Bioeng 96, 94-105.
22. Bernet, N., Delgenes, N., Akunna, J.C., Delgenes, J.P. and Moletta R. (2000) Combined anaerobic-aerobic SBR for the treatment of piggery wastewater. Water Res 34, 611 -619.
23. Frigon, J.C., Bruneau, T., Moletta, R. and Guiot S.R. (2007) Coupled anaerobic-aerobic treatment of whey wastewater in a sequencing batch reactor: proof of concept. Water Sci Technol 55, 201-208.
24. 2O production in Paracoccus denitrificans. Appl Environ Microbiol 65, 989-994.
25. Yangin Gomec, C, Eroglu, V., Ozturk, I., Calii, B. and Mertoglu, B. (2004) Comparative evaluation of methanogenic communities in psychrophilic and mesophilic UASB reactors treating domestic wastewater. In Proceedings of the European Symposium on Environmental Biotechnology, ESEB 2004 ed. Verstraete, W. pp. 69-73. London: A. A. Balkema Publishers.
26. Nikata, T., Natsui, M., Sato, K., Niki, E. and Kakii, K. (2001) Photometric estimation of intracellular polyphosphate content by staining with basic dye. Anal Sci 17, [Suppl]: i1675-i1678.
27. Akar, A., Ucisik Akkaya, E., Yesiladali, S. K., Čelikyilmaz, G., Ubay Čokgor, E., Tamerler, C, Orhon, D. and Čakar, Z.P. (2006) Accumulation of polyhydroxyalkanoates by Microlunatus phosphovorus under various growth conditions. J Ind Microbiol Biotechnol 33, 215-220.
28. Üçişik Akkaya, E. (2004) Physiology and biochemical storage characteristics of E. coli K12. M. Sc. Thesis, Institute of Science & Technology, Istanbul Technical University.
29. Stoscheck, C. M. (1990) Quantitation of protein method. Enzymol 182, 50-68.
30. Murray, R.G.E. (1981) Manual of Methods for General Microbiology. Washington DC: American Society for Microbiology.
31. Beun, J.J., Paletta, R, van Loosdrecht, M.C.M. and Heijnen, J.J. (2000) Stoichiometry and kinetics of poly-β-hydroxybutyrate metabolism in aerobic, slow growing, activated sludge cultures. Biotechnol Bioeng 67, 379-389.
32. Beun, J.J., Verhoef, E.V., van Loosdrecht, M.C.M. and Heijnen, J.J. (2000) Stoichiometry and kinetics of poly-β-hydroxybutyrate metabolism under denitrifying conditions in activated sludge cultures. Biotechnol Bioeng 68, 496-507.
33. Dircks, K., Beun, J.J., van Loosdrecht, M., Heijnen, J.J. and Henze, M. (2001) Glycogen metabolism in aerobic mixed cultures. Biotechnol Bioeng 73, 85-94.
34. Carta, F., Beun, J.J., van Loosdrecht, M.C.M. and Heijnen, J.J. (2001) Simultaneous storage and degradation of PHB and glycogen in activated sludge cultures. Water Res 35, 2693-2701.
35. van den Eynde, E., Vriens, I., Wynats, M., and Verachtert, H. (1984) Transient behaviour and time aspects of intermittently and continuously fed bacterial cultures with regards to filamentous bulking of activated sludge. Eur J Appl Microbiol Biotechnol 19, 44-52.
36. Smolders, G.J.F., van Loosdrecht, M.C.M. and Heynen, J.J. (1995) A metabolic model for the biological phosphorus removal process. Water Sci Technol 31, 79-93.
37. Wei, B., Shin, S., Laporte, D., Wolfe, A.J. and Romeo, T. (2000) Global regulatory mutations in csrA and rpoS cause severe carbon stress in Escherichia coli in the presence of acetate. J Bacteriol 182, 1632-1640.
38. Karahan-Gul, O., van Loosdrecht, M.C.M., and Orhon, D. (2003) Modification of Activated Sludge Model No. 3 considering direct growth on primary substrate. Water Sci Technol 47, 219-225.
39. Gujer, W., Henze, M., Mino, T. and van Loosdrecht, M.C.M. (2000) Activated sludge model No.3, in Activated sludge models ASM1, ASM2, ASM2d and ASM3, Henze, M., Gujer, W., Mino, T. and van Loosdrecht, M.C.M. (eds) IWA technical and scientific report No.9, London, UK.
40. Karahan-Gül, O., Artan, N., Orhon, D., Henze, M. and van Loosdrecht, M.C.M. (2002) Respirometric assessment of storage yield for different substrates. Water Sci Technol 46, 345-352. (Pubitemid 34965585)
41. Shang, L., Jiang, M. and Chang, H.N. (2003) Poly (3-hydroxy-butyrate) synthesis in fed-batch culture of Ralstonia eutropha with phosphate limitation under different glucose concentrations. Biotechnol Lett 25, 1415-1419.
42. Dawes, E. (1990) Novel biodegradable microbial polymers. Dordrecht, The Netherlands, Kluwer Academic Publishers.
43. Verlinden, R.A.J., Hill, D.J., Kenward, M.A., Williams, CD., Radecka, I. (2007) Bacterial synthesis of biodegradable polyhydroxyalkanoates. J Applied Microbiol 102, 1437-1449.
44. Ghatnekar, M.S., Pai, J.S. and Ganesh, M. (2002) Production and recovery of poly-3-hydroxybutyrate from Methylobacterium sp. V49. J Chem Technol Biotechnol 11, 444-448.
45. Pham, T.H., Webb, J.S., Rehm, B.H.A. (2004) The role of polyhydroxyalkanoate biosynthesis by Pseudomonas aeruginosa in rhamnolipid and alginate production as well as stress tolerance and biofilm formation. Microbiol 150, 3405-3413.
46. Ayub, N.D., Pettinari, J., Mendez, B.S. and Lopez, N.I. (2007) The polyhydroxyalkanoate genes of a stress resistant Antarctic Pseudomonas are situated within a genomic island. Plasmid 58, 240-248.
47. Kim, B.S. (2000) Production of poly(3-hydroxybutyrate) from inexpensive substrates. Enzyme Microb Technol 27, 774-777.
48. Insel, G., Karahan, Ö., Özdemir, S., Pala, I., Katipoǧlu, T., Çokgör, E.U. and Orhon, D. (2006) Unified basis for the respirometric evaluation of inhibition for activated sludge. J Env Sci Health, Part A 41, 1763-1780.
49. Çokgör, E.U., Özdemir, S., Karahan, Ö., Insel, G. and Orhon, D. (2007) Critical appraisal of respirometric methods for metal inhibition on activated sludge. J Haz Mat 139, 332-339.
50. Oehmen, A., Zeng, R.J., Yuan, Z.G. and Keller, J. (2005) Anaerobic metabolism of propionate by polyphosphate-accumulating organisms in enhanced biological phosphorus removal systems. Biotechnol Bioeng 91, 43-53.
51. Wang, YJ, Hua, F.L., Tsang, Y.F., Chan, S.Y., Sin, S.N., Chua, H, Yu, P.H.F. and Ren, N.Q. (2007) Synthesis of PHAs from wastes under various C:N ratios. Bioresour Technol 98, 1690-1693.
52. Kelley, A.S., Jackson, D.E., Macosko, C, Srienc, F. (1998) Engineering the composition of co-polyesters synthesized by Alcaligenes eutrophus. Polym Degrad Stab 59, 187-190.
53. Mino, T., van Loosdrecht, M.C.M. and Heijnen, J.J. (1998) Microbiology and biochemistry of the enhanced biological phosphate removal process. Water Res 32, 3193-3207.
54. Kelly, D.P., Euzeby, J.P., Goodhew, C.F. and Wood, A.P. (2006) Redefining Paracoccus denitrificans and Paracoccus pantotrophus and the case for a reassessment of the strains held by international culture collections. Int J Syst Evol Microbiol 56, 2495-2500.
55. Barak, Y. and van Rijn, J. (2000) Atypical polyphosphate accumulation by the denitrifying bacterium Paracoccus denitrificans. Appl Environ Microbiol 66, 1209-1212.
56. Khanna, S. and Srivastava, A. K. (2005) Recent advances in microbial polyhydroxyalkanoates. Process Biochem 40, 607-619.
57. Kim, B.S., Lee, S.C., Lee, S.Y., Chang, H.N., Chang, Y. K. and Woo, S. I. (1994) Production of polyhydroxybutyrate by fed batch with glucose concentration control in Ralstonia eutropha. Biotechnol Bioeng 43, 892-898.