-
2
-
-
4544341015
-
Linear models and empirical bayes methods for assessing differential expression in microarray experiments
-
Smyth GK Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Statistical Applications in Genetics and Molecular Biology 2004; 3 (1). 1-25.
-
(2004)
Statistical Applications in Genetics and Molecular Biology
, vol.3
, Issue.1
, pp. 1-25
-
-
Smyth, G.K.1
-
4
-
-
0043203327
-
Multiple hypothesis testing in microarray experiments
-
DOI 10.1214/ss/1056397487
-
Dudoit S., Shaffer JP, Boldrick JC Multiple hypothesis testing in microarray experiments. Statistical Science 2003; 18: 71-103. (Pubitemid 41461823)
-
(2003)
Statistical Science
, vol.18
, Issue.1
, pp. 71-103
-
-
Dudoit, S.1
Shaffer, J.P.2
Boldrick, J.C.3
-
6
-
-
0034069495
-
Gene ontology: Tool for the unification of biology
-
The Gene Ontology Consortium
-
The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nature Genetics 2000; 25: 25-29.
-
(2000)
Nature Genetics
, vol.25
, pp. 25-29
-
-
-
7
-
-
0038054341
-
Pgc-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes
-
Mootha VK, Lindgren CM, Eriksson KF et al. Pgc-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nature Genetics 2003; 34 (3). 267-273.
-
(2003)
Nature Genetics
, vol.34
, Issue.3
, pp. 267-273
-
-
Mootha, V.K.1
Lindgren, C.M.2
Eriksson, K.F.3
-
9
-
-
3142673366
-
Using the gene ontology for microarray data mining: A comparison of methods and application to age effects in human prefrontal cortex
-
Pavlidis P., Qin J., Arango V., Mann JJ, Sibille E. Using the gene ontology for microarray data mining: a comparison of methods and application to age effects in human prefrontal cortex. Neurochemical Research 2004; 29: 1213-1222.
-
(2004)
Neurochemical Research
, vol.29
, pp. 1213-1222
-
-
Pavlidis, P.1
Qin, J.2
Arango, V.3
Mann, J.J.4
Sibille, E.5
-
10
-
-
0345832338
-
A global test for groups of genes: Testing association with a clinical outcome
-
Goeman J., van de Geer S., de Kort F., van Houwelingen H. A global test for groups of genes: testing association with a clinical outcome. Bioinformatics 2004; 20: 93-99.
-
(2004)
Bioinformatics
, vol.20
, pp. 93-99
-
-
Goeman, J.1
Van De Geer, S.2
De Kort, F.3
Van Houwelingen, H.4
-
11
-
-
18744406044
-
Testing association of a pathway with survival using gene expression data
-
Goeman JJ, Oosting J., Cleton-Jansen AM, Anninga JK, van Houwelingen HC Testing association of a pathway with survival using gene expression data. Bioinformatics 2005; 21 (9). 1950-1957.
-
(2005)
Bioinformatics
, vol.21
, Issue.9
, pp. 1950-1957
-
-
Goeman, J.J.1
Oosting, J.2
Cleton-Jansen, A.M.3
Anninga, J.K.4
Van Houwelingen, H.C.5
-
12
-
-
25444502609
-
PAGE: Parametric analysis of gene set enrichment
-
Kim SY, Volsky DJ PAGE: Parametric analysis of gene set enrichment. BMC Bioinformatics 2005; 6 (144). 1-12.
-
(2005)
BMC Bioinformatics
, vol.6
, Issue.144
, pp. 1-12
-
-
Kim, S.Y.1
Volsky, D.J.2
-
13
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
-
Subramanian A., Tamayo P., Mootha VK et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proceedings of National Academy of Sciences 2005; 102 (43). 15545-15550.
-
(2005)
Proceedings of National Academy of Sciences
, vol.102
, Issue.43
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
-
14
-
-
26444608611
-
Discovering statistically significant pathways in expression profiling studies
-
Tian L., Greenberg SA, Kong SW, Altschuler J., Kohane IS, Park PJ Discovering statistically significant pathways in expression profiling studies. Proceedings of National Academy of Sciences 2005; 102 (38). 13544-13549.
-
(2005)
Proceedings of National Academy of Sciences
, vol.102
, Issue.38
, pp. 13544-13549
-
-
Tian, L.1
Greenberg, S.A.2
Kong, S.W.3
Altschuler, J.4
Kohane, I.S.5
Park, P.J.6
-
16
-
-
15444364657
-
On the utility of pooling biological samples in microarray experiments
-
Kendziorski C., Irizarry RA, Chen KS, Haag JD, Gould MN On the utility of pooling biological samples in microarray experiments. Proceedings of National Academy of Sciences 2005; 102 (12). 4252-4257.
-
(2005)
Proceedings of National Academy of Sciences
, vol.102
, Issue.12
, pp. 4252-4257
-
-
Kendziorski, C.1
Irizarry, R.A.2
Chen, K.S.3
Haag, J.D.4
Gould, M.N.5
-
17
-
-
35348890683
-
On testing the significance of sets of genes
-
Efron B., Tibshirani R. On testing the significance of sets of genes. Annals of Applied Statistics 2007; 1 (1). 107-129.
-
(2007)
Annals of Applied Statistics
, vol.1
, Issue.1
, pp. 107-129
-
-
Efron, B.1
Tibshirani, R.2
-
18
-
-
33846689706
-
Using gostats to test gene lists for go term association
-
Falcon S., Gentleman R. Using gostats to test gene lists for go term association. Bioinformatics 2006; 567 (1). 257-258.
-
(2006)
Bioinformatics
, vol.567
, Issue.1
, pp. 257-258
-
-
Falcon, S.1
Gentleman, R.2
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