Mass spectrometry-based metabolomics oriented by correlation analysis for wound-induced molecule discovery: Identification of a novel jasmonate glucoside

Phytochemical Analysis

Volumn 21, Issue 1, 2010, Pages 95-101

  Glauser, Gaetan ^a   Boccard, Julien ^a   Rudaz, Serge ^a   Wolfender, Jean Luc ^a  

^a UNIVERSITY OF GENEVA   (Switzerland)

Author keywords

Arabidopsis thaliana; Jasmonates; Mass spectrometry; Metabolomics; OPC 4; UHPLC TOFMS; Wounding

Indexed keywords

BUTYRIC ACID; CARBOHYDRATES; CORRELATION METHODS; METABOLITES; MOLECULES; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PLANT EXTRACTS;

ARABIDOPSIS THALIANA; CORRELATION ANALYSIS; JASMONATES; METABOLOMICS; OPC-4; OXYLIPINS; TIME OF FLIGHT MASS SPECTROMETRY; ULTRA-HIGH; ULTRA-HIGH PRESSURE LIQUID CHROMATOGRAPHY COUPLED TO TIME-OF-FLIGHT MASS SPECTROMETRY; WOUNDING;

MASS SPECTROMETRY;

3 OXO 2 (2 PENTENYL)CYCLOPENTANE 1 BUTYRIC ACID; BUTYRIC ACID DERIVATIVE; GLUCOSIDE; JASMONIC ACID; UNCLASSIFIED DRUG;

ARTICLE; CORRELATION ANALYSIS; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLOMICS; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; SIGNAL TRANSDUCTION; TANDEM MASS SPECTROMETRY; WOUND;

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 73349139514     PISSN: 09580344     EISSN: 10991565     Source Type: Journal    
DOI: 10.1002/pca.1155     Document Type: Article

References (20)

1. Boccard J, Grata E, Thiocone A, Gauvrit JY, Lanteri P, Carrupt PA, Wolfender JL, Rudaz S. 2007. Multivariate data analysis of rapid LC-TOF/MS experiments from Arabidopsis thaliana stressed by wounding. Chemometr Intell Lab 86: 189-197.
2. Browse J. 2005. Jasmonate: an oxylipin signal with many roles in plants. Vitam Horm 72: 431-456.
3. Farmer EE. 2009. 3-oxo-2(2[Z]-pentenyl)-cyclopentane-1-butanoic acid. Sci. Signal; http://stke.sciencemag.org/cgi/cm/stkecm;CMC-7395 (Connections Map Component in the Database of Cell Signaling, accessed 18 May 2009).
4. Fiehn O. 2002. Metabolomics - the link between genotypes and phenotypes. Plant Mol Biol 48: 155-171.
5. Gidda SK, Miersch O, Levitin A, Schmidt J, Wasternack C, Varin L. 2003. Biochemical and molecular characterization of a hydroxyjasmonate sulfotransferase from Arabidopsis thaliana. J Biol Chem 278: 17895-17900.
6. Glauser G, Guillarme D, Grata E, Boccard J, Thiocone A, Carrupt P-A, Veuthey J-L, Rudaz S, Wolfender J-L. 2008a. Optimized liquid chromatography-mass spectrometry approach for the isolation of minor stress biomarkers in plant extracts and their identification by capillary nuclear magnetic resonance. J Chromatogr A 1180: 90-98.
7. Glauser G, Grata E, Dubugnon L, Rudaz S, Farmer EE, Wolfender JL. 2008b. Spatial and temporal dynamics of jasmonate synthesis and accumulation in Arabidopsis in response to wounding. J Biol Chem 283: 16400-16407.
8. Grata E, Boccard J, Guillarme D, Glauser G, Carrupt P-A, Farmer EE, Wolfender J-L, Rudaz S. 2008. UPLC-TOF-MS for plant metabolomics: a sequential approach for wound marker analysis in Arabidopsis thaliana. J Chromatogr B 871: 261-270.
9. Gundlach H, Zenk MH. 1998. Biological activity and biosynthesis of pentacyclic oxylipins: The linoleic acid pathway. Phytochemistry 47: 527-537.
10. Hall RD. 2006. Plant metabolomics: from holistic hope, to hype, to hot topic. New Phytol 169: 453-468.
11. Hirai MY, Klein M, Fujikawa Y, Yano M, Goodenowe DB, Yamazaki Y, Kanaya S, Nakamura Y, Kitayama M, Suzuki H and others. 2005. Elucidation of gene-to-gene and metabolite-to-gene networks in Arabidopsis by integration of metabolomics and transcriptomics. J Biol Chem 280: 25590-25595.
12. Mosblech A, Feussner I, Heilmann I. 2009. Oxylipins: Structurally diverse metabolites from fatty acid oxidation. Plant Physiol Biochem 47: 511-517.
13. Olson DL, Norcross JA, O'Neil-Johnson M, Molitor PF, Detlefsen DJ, Wilson AG, Peck TL. 2004. Microflow NMR: Concepts and capabilities. Anal Chem 76: 2966-2974.
14. Reymond P, Weber H, Damond M, Farmer EE. 2000. Differential gene expression in response to mechanical wounding and insect feeding in Arabidopsis. Plant Cell 12: 707-720.
15. Sembdner G, Parthier B. 1993. The biochemistry and the physiological and molecular actions of jasmonates. Annu Rev Plant Phys 44: 569-589.
16. Shulaev V, Cortes D, Miller G, Mittler R. 2008. Metabolomics for plant stress response. Physiol Plantarum 132: 199-208.
17. Staswick PE, Tiryaki I. 2004. The oxylipin signal jasmonic acid is activated by an enzyme that conjugates it to isoleucine in Arabidopsis. Plant Cell 16: 2117-2127.
18. Swiatek A, Van Dongen W, Esmans EL, Van Onckelen H. 2004. Metabolic fate of jasmonates in tobacco bright yellow-2 cells. Plant Physiol 135: 161-172.
19. Wasternack C. 2007. Jasmonates: An update on biosynthesis, signal transduction and action in plant stress response, growth and development. Ann Bot 100: 681-697.
20. Weber H, Vick BA, Farmer EE. 1997. Dinor-oxo-phytodienoic acid: a new hexadecanoid signal in the jasmonate family. Proc Nat Acad Sci USA 94: 10473-10478.