Association of HLA-A, B, DRB1 alleles and haplotypes with HIV-1 infection in Chongqing, China

BMC Infectious Diseases

Volumn 9, Issue , 2009, Pages

  Huang, Xia ^a,c   Ling, Hua ^b   Mao, Wei ^c   Ding, Xianbin ^b   Zhou, Quanhua ^b   Han, Mei ^b   Wang, Fang ^c   Cheng, Lei ^c   Xiong, Hongyan ^a  

^a THIRD MILITARY MEDICAL UNIVERSITY   (China)

^b Chongqing Center for Disease Control and Prevention   (China)

^c Chongqing Blood Center   (China)

Author keywords

[No Author keywords available]

Indexed keywords

HLA A ANTIGEN; HLA B ANTIGEN; HLA DR ANTIGEN; HLA-DRB1 ANTIGEN;

ADULT; ALLELE; ARTICLE; CHINA; CONTROLLED STUDY; DRUG RESEARCH; FEMALE; GENE FREQUENCY; GENE LOCUS; GENETIC ANALYSIS; GENETIC ASSOCIATION; GENETIC DATABASE; GENOTYPE; HAPLOTYPE; HLA TYPING; HOMOZYGOSITY; HUMAN; HUMAN CELL; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS 1 INFECTION; INFECTION RESISTANCE; INFECTION SENSITIVITY; MAJOR CLINICAL STUDY; MALE; OLIGONUCLEOTIDE PROBE; POLYMERASE CHAIN REACTION; POPULATION GENETICS; POPULATION RESEARCH; ADOLESCENT; CASE CONTROL STUDY; GENETIC PREDISPOSITION; GENETICS; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; IMMUNOLOGY; MIDDLE AGED; MULTIVARIATE ANALYSIS; STATISTICAL MODEL;

ADOLESCENT; ADULT; ALLELES; CASE-CONTROL STUDIES; CHINA; FEMALE; GENE FREQUENCY; GENETIC PREDISPOSITION TO DISEASE; GENETICS, POPULATION; HAPLOTYPES; HIV INFECTIONS; HLA-A ANTIGENS; HLA-B ANTIGENS; HLA-DR ANTIGENS; HUMANS; LOGISTIC MODELS; MALE; MIDDLE AGED; MULTIVARIATE ANALYSIS; YOUNG ADULT;

EID: 73249128879     PISSN: None     EISSN: 14712334     Source Type: Journal    
DOI: 10.1186/1471-2334-9-201     Document Type: Article

References (29)

1. 2008 Report on the global AIDS epidemic. , http://www.unaids.org/en/KnowledgeCentre/HIVData/GlobalReport/2008/2008_ Global_report.asp
2. UNAIDS.AIDS epidemic update: December 2007. , http://data.unaids.org/pub/EPISlides/2007/2007_epiupdate_en.pdf
3. Chongqing Program Office for AAAC Chongqing Baseline Survey Report for China-Gates Foundation Cooperation on Accelerating AIDS Action in China (AAAC). 2008,
4. Ling H, Xing H, Han M, Qiu ZZ, Qian TX, Wang Y, Wang J, Shao YM. Subtypes and sequence analysis on HIV-1 strains circulating in Chongqing. Chin J AIDS©STDs 2005, 11:345-347.
5. Carrington M, O'Brien SJ. The influence of HLA genotype on AIDS. Annu Rev Med 2003, 54:535-551. 10.1146/annurev.med.54.101601.152346, 12525683.
6. Marmor M, Hertzmark K, Thomas SM, Halkitis PN, Vogler M. Resistance to HIV infection. J Urban Health 2006, 83:5-17. 10.1007/s11524-005-9003-8, 1539443,1539443, 16736351.
7. Al Jabri AA. HLA and in vitro susceptibility to HIV infection. Mol Immunol 2002, 38:959-967. 10.1016/S0161-5890(02)00023-8, 12009574.
8. Stephens HAF. HIV-1 diversity versus HLA class I polymorphism. Trends Immunol 2005, 26:41-47. 10.1016/j.it.2004.11.001, 15629408.
9. Selvaraj P, Swaminathan S, Alagarasu K, Raghavan S, Narendran G, Narayanan P. Association of human leukocyte antigen-A11 with resistance and B40 and DR2 with susceptibility to HIV-1 infection in south India. J Acquir Immune Defic Syndr 2006, 43:497-498. 10.1097/01.qai.0000233312.36226.76, 17099315.
10. Hong KX, Lu XZ, Qin GM, Chen JP, Ruan YH, Xing H, Zhu JH, Shao YM. Relationship of HLA-A,-Cw polymorphisms with HIV/AIDS in Chinese Yi ethnic group of Sichuan province. Virologica Sinica 2007, 22:301-306.
11. Xu MY, Hong KX, Deng XL, Li J, Peng H, Ruan YH, Qin GM, Xing H, Xu XH, Shao YM. Association of HLA-B alleles with human immunodeficiency virus type 1 infection in the Yi ethnic group in Sichuan province. Biomed Environ Sci 2004, 17:203-208.
12. Zhao B, Han XX, Dai D, Dong XH, Zhang M, Zhang XM, Shi WY, Shang H. Studies on potential linkage between HLA class I-B alleles and disease progression in HIV infection in China population. Chin J Immunol 2008, 24:430-435.
13. Qing ML, Li TS, Han Y, Qiu ZF, Jiao Y. Accelerating effect of human leukocyte antigen-Bw6 homozygosity on disease progression in Chinese HIV-1-infected patients. J Acquir Immune Defic Syndr 2006, 41:137-139. 10.1097/01.qai.0000195607.25262.92, 16394843.
14. Holdsworth R, Hurley CK, Marsh SGE, Lau M, Noreen HJ, Kempenich JH, Setterholm M, Maiers M. The HLA dictionary 2008: a summary of HLA-A, -B, -C, -DRB1/3/4/5, and -DQB1 alleles and their association with serologically defined HLA-A, -B, -C, -DR, and -DQ antigens. Tissue Antigens 2009, 73:95-170. 10.1111/j.1399-0039.2008.01183.x, 19140825.
15. Schneider S, Roessli D, Excoffier L. ARLEQUIN ver 2.000: A software for population genetics data analysis. , http://anthro.unige.ch/arlequin
16. Sun JL, Du KM, Fu M, Sun Y, Jin H, Xie JH, Ji Y, Yang JH, Ji YH, Zhang Z, Mao Z, Liu DZ, Qian KC. Analysis on HLA polymorphism of 20596 stem-cell donor of Han population. Chin J Blood Transfusion 2006, 19:379-85.
17. Wu QJ, Liu ML, Qi J, Liu C, Zhang Y, Wei XQ. Gene andhaplotype frequencies for the loci HLA-A, B and DRB1 in 11755 NorthChinese Han bone marrow registry donors. J Exp Hematol 2007, 15:357-63.
18. Feng ML, Lu Q, Ma J, Ji YH, Ji Y, Zhang GL, Yang Y. Investigation on the HLA polymorphism of North China population in Shanghai Bone Marrow Bank. Shanghai J Immunol 2002, 22:263-6.
19. Luo M, Chen Q, Chen XL, Wang Y, Zou H, Xu XH, Liang ZH, Chen JX, Zheng ZW. HLA-B*15 diversity in Sichuan Han population. Chin J Blood Transfusion 2008, 21:352-356.
20. Tang SL, Xue FZ, Wang JZ, Hu P, Zhang L, Wang ZG. Meta-analysis on the association of HLA-HIV polymorphism and AIDS in population. PreV Med Trib 2005, 11:139-142.
21. Gao X, Nelson GW, Karacki P, Martin MP, Phair J, Kaslow R, Goedert JJ, Buchbinder S, Hoots K, Vlahov D, O'Brien SJ, Carrington M. Effect of a single amino acid change in MHC class I molecules on the rate of progression to AIDS. N Engl J Med 2001, 344:1668-1675. 10.1056/NEJM200105313442203, 11386265.
22. Jansen CA, Kostense S, Vandenberghe K, Nanlohy NM, De Cuyper IM, Piriou E, Manting EH, Miedema F, van Baarle D. Highresponsiveness of HLA-B57-restricted Gag-specific CD8+ T cells in vitro may contribute to the protective effect of HLA-B57 in HIV-infection. Eur J Immunol 2005, 35:150-158. 10.1002/eji.200425487, 15593302.
23. Lazaryan A, Lobashevsky E, Mulenga J, Karita E, Allen S, Tang J, Kaslow RA. Human leukocyte antigen B58 supertype and human immunodeficiency virus type 1 infection in native Africans. J Virol 2006, 80:6056-6060. 10.1128/JVI.02119-05, 1472610, 16731944.
24. Nguyen L, Chaowanachan T, Vanichseni S, McNicholl JM, Mock PA, Nelson R, Hodge TW, van Griensven F, Choopanya K, Mastro TD, Tappero JW, Hu DJ. Frequent human leukocyte antigen class I alleles are associated with higher viral load among HIV type 1 seroconverters in Thailand. J Acquir Immune Defic Syndr 2004, 37:1318-1323. 10.1097/01.qai.0000127059.98621.55, 15385741.
25. Dorak MT, Tang J, Penman-Aguilar A, Westfall AO, Zulu I, Lobashevsky ES, Kancheya NG, Schaen MM, Allen SA, Kaslow RA. Transmission of HIV-1 and HLA-B allele-sharing within serodiscordant heterosexual Zambian couples. Lancet 2004, 363:2137-2139. 10.1016/S0140-6736(04)16505-7, 15220037.
26. MacDonald KS, Embree J, Njenga S, Nagelkerke NJ, Ngatia I, Mohammed Z, Barber BH, Ndinya-Achola J, Bwayo J, Plummer FA. Mother-child class I HLA concordance increases perinatal human immunodeficiency virus type 1 transmission. J Infect Dis 1998, 177:551-556. 10.1086/514243, 9498431.
27. Ahuja SK, Catano G. Sharing is caring, except when it comes to HLA-class-I alleles in HIV-1transmission. Lancet 2004, 363:2103-2104. 10.1016/S0140-6736(04)16536-7, 15220030.
28. Altfeld M, Kalife ET, Qi Y, Streeck H, Lichterfeld M, Johnston MN, Burgett N, Swartz ME, Yang A, Alter G, Yu XG, Meier A, Rockstroh JK, Allen TM, Jessen H, Rosenberg ES, Carrington M, Walker BD. HLA Alleles Associated with Delayed Progression to AIDS Contribute Strongly to the Initial CD8(+) T Cell Response against HIV-1. PLoS Med 2006, 3:1851-1864.
29. Kiepiela P, Leslie AJ, Honeyborne I, Ramduth D, Thobakgale C, Chetty S, Rathnavalu P, Moore C, Pfafferott KJ, Hilton L, Zimbwa P, Moore S, Allen T, Brander C, Addo MM, Altfeld M, James I, Mallal S, Bunce M, Barber LD, Szinger J, Day C, Klenerman P, Mullins J, Korber B, Coovadia HM, Walker BD, Goulder PJ. Dominant influence of HLA-B in mediating the potential co-evolution of HIV and HLA. Nature 2004, 432:769-775. 10.1038/nature03113, 15592417.